mRNA_H-paniculata_contig24842.6746.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: D8LC21_ECTSI (VPS11_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC21_ECTSI) HSP 1 Score: 241 bits (615), Expect = 1.540e-71 Identity = 118/129 (91.47%), Postives = 126/129 (97.67%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLKV 387
GLAFILT+RN+LLRLRERDT SKL+LLFRKNLYPMAISLAYASDHDVSEILGIYRM+GDHLYKKGDF+GAMQQY+ TIG L+PSYVIRRFLDAQRIGLLTSYLEALHDAGQASS+HTTLLLNCHTKLKV
Sbjct: 445 GLAFILTNRNSLLRLRERDTSSKLELLFRKNLYPMAISLAYASDHDVSEILGIYRMHGDHLYKKGDFEGAMQQYQCTIGQLDPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSEHTTLLLNCHTKLKV 573
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: A0A836CMH8_9STRA (VPS11_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH8_9STRA) HSP 1 Score: 200 bits (509), Expect = 4.850e-57 Identity = 94/126 (74.60%), Postives = 113/126 (89.68%), Query Frame = 1
Query: 7 AFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
A+++T R ALL LRERDT +KL+LL+RKNLYP+AISLAYASD+DV+ ++ +YRMYGDHLYKKGDF+GA+QQY+ TIGH+ PSYVIRR+LDAQRIG LT YLEALH A AS+DHTTLLLNC+TKLK
Sbjct: 377 AYVITSRGALLLLRERDTAAKLELLYRKNLYPVAISLAYASDYDVAAVMDMYRMYGDHLYKKGDFEGAVQQYQHTIGHVEPSYVIRRYLDAQRIGHLTQYLEALHAAQHASADHTTLLLNCYTKLK 502
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: A0A7S2V2C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C6_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.180e-54 Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 1
Query: 4 LAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
+A+++T + LRL E+D SKLDLLFRKNLYP+AISLAY+S ++V I+ IYRMYGDHLYKKGD+D AMQQY T+G+L PSY+IRRFLDAQRI LT YLE LHD G A++DHTTLLLNC+TKLK
Sbjct: 219 VAYLVTTHQSFLRLSEKDMASKLDLLFRKNLYPIAISLAYSSSYEVGAIMDIYRMYGDHLYKKGDYDAAMQQYCHTVGYLEPSYIIRRFLDAQRITNLTEYLEKLHDGGHATADHTTLLLNCYTKLK 345
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: H3GW62_PHYRM (Vacuolar protein sorting-associated protein 11 homolog n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GW62_PHYRM) HSP 1 Score: 177 bits (449), Expect = 5.850e-49 Identity = 82/128 (64.06%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++DV+ I+ I+RMYGDHLY+KGDFDG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC+TKLK
Sbjct: 344 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 471
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: A0A2D4BR03_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR03_PYTIN) HSP 1 Score: 177 bits (448), Expect = 9.080e-49 Identity = 81/128 (63.28%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++D++ I+ I+RMYGDHLY+KGDFDG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC+TKLK
Sbjct: 689 GAIFVVSSIGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDFDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 816
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: A0A8K1CGT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGT8_PYTOL) HSP 1 Score: 176 bits (446), Expect = 1.580e-48 Identity = 80/128 (62.50%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++D++ I+ I+RMYGDHLY+KGD+DG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC+TKLK
Sbjct: 386 GAIFVVSSVGCVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYEKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 513
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: A0A484DY14_BRELC (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DY14_BRELC) HSP 1 Score: 176 bits (446), Expect = 1.580e-48 Identity = 81/128 (63.28%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++DV+ I+ I+RMYGDHLY+KGD+DG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC+TKLK
Sbjct: 399 GAIFVVSSMGHVYRLSEKDTTSKLEILFRKNLYSIAISLAFSSNYDVNSIIDIFRMYGDHLYQKGDYDGSLRQYVRTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 526
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: F0WA21_9STRA (Vacuolar protein sorting-associated protein 11 homolog n=2 Tax=Albugo TaxID=65356 RepID=F0WA21_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.760e-48 Identity = 81/128 (63.28%), Postives = 107/128 (83.59%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++D++ I+ I+RMYGDHLY+KGD+DG+++QY TIGHL PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC TKLK
Sbjct: 351 GSIFVVSSAGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIVDIFRMYGDHLYQKGDYDGSLRQYTRTIGHLEPSYVIRRFLDAQRIHNLTNYLEALHEKAFANAEHTTLLLNCFTKLK 478
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: K3WLY6_GLOUD (Vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLY6_GLOUD) HSP 1 Score: 175 bits (444), Expect = 2.960e-48 Identity = 80/128 (62.50%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F+++ + RL E+DT SKL++LFRKNLY +AISLA++S++D++ I+ I+RMYGDHLY+KGD+DG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLEALH+ A+++HTTLLLNC+TKLK
Sbjct: 385 GAIFVVSSVGHVYRLTEKDTTSKLEILFRKNLYSIAISLAFSSNYDINSIMDIFRMYGDHLYQKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTAYLEALHEKAFANAEHTTLLLNCYTKLK 512
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Match: T0Q0R4_SAPDV (Vacuolar protein sorting-associated protein 11 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q0R4_SAPDV) HSP 1 Score: 172 bits (435), Expect = 4.790e-47 Identity = 80/128 (62.50%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 1 GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEILGIYRMYGDHLYKKGDFDGAMQQYKSTIGHLNPSYVIRRFLDAQRIGLLTSYLEALHDAGQASSDHTTLLLNCHTKLK 384
G F++T ++ RL E+DT SKL +LF KNLYP+AISLA++S++D+S I+ I+RMYGD LY KGD+DG+++QY TIGH+ PSYVIRRFLDAQRI LT+YLE LH A+++HTTLLLNC+TKLK
Sbjct: 385 GAVFVVTSFGSVYRLSEKDTASKLSILFDKNLYPIAISLAFSSNYDLSSIMDIFRMYGDFLYNKGDYDGSLRQYARTIGHVEPSYVIRRFLDAQRIHNLTTYLETLHTKAFATAEHTTLLLNCYTKLK 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24842.6746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24842.6746.1 >prot_H-paniculata_contig24842.6746.1 ID=prot_H-paniculata_contig24842.6746.1|Name=mRNA_H-paniculata_contig24842.6746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp GLAFILTDRNALLRLRERDTPSKLDLLFRKNLYPMAISLAYASDHDVSEIback to top mRNA from alignment at H-paniculata_contig24842:882..1571- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24842.6746.1 ID=mRNA_H-paniculata_contig24842.6746.1|Name=mRNA_H-paniculata_contig24842.6746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=690bp|location=Sequence derived from alignment at H-paniculata_contig24842:882..1571- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24842:882..1571- >mRNA_H-paniculata_contig24842.6746.1 ID=mRNA_H-paniculata_contig24842.6746.1|Name=mRNA_H-paniculata_contig24842.6746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig24842:882..1571- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |