mRNA_H-paniculata_contig248.6731.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: D8LUA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA5_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 2.250e-158 Identity = 220/272 (80.88%), Postives = 241/272 (88.60%), Query Frame = 1
Query: 7 SLGGEALPALGHSSSTSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPFGW 822
SLGGE LPA S S+ L+MRRTLMDS+N TVRSAPKIGFGT+GRPP+Q+GG EAPGPGAYQLKST+FVNPSS+IRSPPS+TMRGREKFGSPDLKAIDRTCQ+EPGPGHYK+ IVNPQE++APKYTFPKD G RE RAPGPG YN+ GVGKQVLSTKRSH+GVGFGTGNR DLLVQSTADVGPGEY++PG+TGE+Q+DSR N GAKFSKA RMGK GS ED APGPGNYRLPPGICG+G ASPY SAPAATLSGREKFGSPFGW
Sbjct: 17 SLGGEYLPAATKSKSSDILKMRRTLMDSYNETVRSAPKIGFGTAGRPPLQDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQLEPGPGHYKLAIVNPQEENAPKYTFPKDAGAMIRENVVRAPGPGRYNLHPGVGKQVLSTKRSHNGVGFGTGNRPDLLVQSTADVGPGEYSIPGSTGERQVDSRRCNKSGAKFSKAVRMGKPGSLEDVAPGPGNYRLPPGICGQGAASPYPSAPAATLSGREKFGSPFGW 288
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A835YVV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV8_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.310e-78 Identity = 134/272 (49.26%), Postives = 176/272 (64.71%), Query Frame = 1
Query: 61 LRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIT-IVNPQEQHAPKYTFPKDIGPGAREKGHR--APGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKA---PRMGKTG------------SSEDSA--PGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
++M RT++DS+N TV AP++GFGT+ RP + +GG++ PGPGAY +KST+F NP S RSPP +++RGREKFGSPDLKA DR QMEPGP YKI I +++ P Y+FP+ + R +PGPG Y +P VGKQVLSTKRSHSG FGTG R L+ ST D+GPG+Y +PG G KQ+DSR + ++F+K P++ K G + +D A PG G Y +P + R S +RS P A +SGREKFGSPF
Sbjct: 1 MKMGRTVIDSYNATVPMAPRVGFGTADRPALLDGGDDVPGPGAYAIKSTMFKNPRSCFRSPPCFSIRGREKFGSPDLKACDRATQMEPGPAAYKIPHIAGSEQRQPPAYSFPRSSWAKSDAVTARDISPGPGTYALPAAVGKQVLSTKRSHSGPAFGTGGRPPLISVSTDDIGPGDYEIPGNLGTKQVDSRKTTHQASRFAKPGGPPKVKKGGHGAHPQTPAESHAEDDFAHVPGAGAYNIPSTLV-RNPCSMFRSPPVARMSGREKFGSPF 271
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A8J2SYT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYT1_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.280e-68 Identity = 125/262 (47.71%), Postives = 170/262 (64.89%), Query Frame = 1
Query: 52 TSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVN-PSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLL-VQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSE-----DSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
T L + +++DSFN T +++P FG++ RP + + E PG GAY +K+TI N P S I S P +++R REKFG P L+A+D EPGPG Y +NP + + PKY+FPK G ++K +PGPG Y IP+ VG+QVLSTK +++G+GFG G R LL VQ+ DVGPGEY + + KQ+DSR +G KFS++ R KT S + PGPG Y+LP G+CG G + P+R+AP A+LSGREKFGSPF
Sbjct: 2 TKSLGLDHSIIDSFNATKKTSPSYQFGSAIRPRLSDA-EPTPGAGAYSIKTTILGNVPDSRIVSTPQFSLRSREKFGDPMLRALDAGTASEPGPGWYTPKQINPNDDNPPKYSFPK--GHFIKDKARFSPGPGAYAIPSSVGRQVLSTKSNNNGMGFGQGERPPLLRVQN--DVGPGEYGVGISACRKQVDSRKKTSGFVKFSRSARD-KTSSMTMQDELQARPGPGTYQLPSGLCGSGSSYPFRAAPRASLSGREKFGSPF 257
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: F0YJJ1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ1_AURAN) HSP 1 Score: 189 bits (480), Expect = 1.980e-54 Identity = 105/221 (47.51%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 118 KIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVN-PSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSS----EDSAPGPGNYRLPPGICGRGVASPYR 765
++ FG++ RP + E E PG GAY +K+TI N P S I S P +++R REKFG+P L+A+D +PGPG Y VNP++ +APKY+FPK G ++K +PGPG Y IP+ VGKQVLSTK +++G+GFG G R LL DVGPGEY + + +KQ+DSR +G KFS+ R T +S E++ PGPG Y+LPPG+CG G + P R
Sbjct: 92 RVSFGSAIRPRLSEA-EPTPGAGAYSIKTTILGNVPDSKIHSAPQFSLRSREKFGNPMLRALDTETARQPGPGWYTPKQVNPKDDNAPKYSFPK--GHFIKDKARLSPGPGAYVIPSSVGKQVLSTKSNNNGMGFGQGERPPLLRVHN-DVGPGEYGVGISACKKQVDSRKKTSGFVKFSRCARDKATSTSAKDEEEALPGPGTYQLPPGLCGGGSSYPLR 308
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A8K1CPW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW0_PYTOL) HSP 1 Score: 146 bits (368), Expect = 7.360e-39 Identity = 99/239 (41.42%), Postives = 131/239 (54.81%), Query Frame = 1
Query: 109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPR--MGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
+AP FG+S RP G ++PGPGAYQ+ S+I S + + P+ ++ GREKFGS D+K T PGPG Y TIVNP+E+ APKY+ K + K + PGPG Y PT +G+ VLST++ + F R L STADVGPG+Y + A KQ S + F R + KTG PGP +Y+ P G+ V S YR+AP ++SGR KFGS F
Sbjct: 47 TAPTTVFGSSTRP-QTSSGSKSPGPGAYQIPSSIGKPILSTMNAAPACSISGREKFGSTSDMK----TAANSPGPGDYTSTIVNPRERSAPKYSLGKKWTQLSGMK--KFPGPGEYEAPTTIGRTVLSTQKQNPMPAFPRVERKPLAATSTADVGPGQYGVVVAAVGKQPLSTLTSAAAFSFGNEQRSKLAKTGVE---VPGPASYQ-PKSSVGKQVESTYRTAPKISMSGRTKFGSHF 274
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: K3WN56_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WN56_GLOUD) HSP 1 Score: 131 bits (329), Expect = 4.740e-33 Identity = 92/237 (38.82%), Postives = 127/237 (53.59%), Query Frame = 1
Query: 109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
+AP FG+S RP G ++PGPGAYQ+ S+I S + P+ ++ GREKFGS D K T PGPG Y IVNP+E+ AP+Y+ K G + K ++PGPG Y T +G+ LST++S+ F R L +T DVGPG+Y + A KQ S + F R + + D+ PGP +Y + G+ V S YR+AP ++SGR KFGS F
Sbjct: 51 TAPVTVFGSSTRPHTTSG-NKSPGPGAYQIPSSIGKPVLSTMMQAPACSISGREKFGSTGDAKLSGST----PGPGDYTSEIVNPRERAAPRYSLGKKWGNLSEMK--KSPGPGSYESSTTLGRTFLSTQKSNPMPAFTKVERKPLTSGNT-DVGPGQYAVVVAAVGKQPISTLSSAASYSFGTELRTKVSRGTVDAVPGPNSYPSKSSV-GKQVESTYRTAPKCSMSGRTKFGSHF 278
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A6G0XD37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD37_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.780e-31 Identity = 88/244 (36.07%), Postives = 121/244 (49.59%), Query Frame = 1
Query: 106 RSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGV--GKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFS-----KAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
R+AP FGTS RP G ++PGPGAYQ+ +TI S IRS P+ ++ GREKFGS + +C PGPG Y IVNP E++AP+++ K G + ++PGPG Y+ P + + VLST + + F NR KQ+ S N+ FS KAP + S D++P P Y+ + G V S Y+SAP ++SGR KFGS F
Sbjct: 55 RTAPTTCFGTSSRPKDPGDGNKSPGPGAYQVPTTIGKPVVSTIRSAPACSISGREKFGSTSDLKLAASC---PGPGDYTPHIVNPNERNAPQFSLGKKWTKGIVDSSAKSPGPGAYDTPESLLNTRTVLSTSKHATASSFPKDNRXXXXXXXXXXXXXXXXXXXNVAVGKQVVSTVTNSAAYSFSVVGRSKAPVGARM--SHDASPAPNAYKHKDAV-GTQVLSTYKSAPKCSMSGRTKFGSHF 292
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: W7T5U8_9STRA (Flagellar associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5U8_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.400e-31 Identity = 85/210 (40.48%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 79 LMDSFNGTVRSAPKIGFGTSGRPPM--QEGGEEAPGPGAYQLKSTIFVNPS-SVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIT-------IVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNR-----SDLLVQSTADVG-PGEYTMPGATGEKQIDSRWWNNGGAKFSKA 660
++ S+ G + P GFG+S R + G + PGPGAY LKST+ + + S IRS +++RGRE FGS + DR C EPGPG Y + + NP+ + AP+++FPK P R K PGPGHY+ +G QVLS++ S FG G + SDL T+ G PG Y A G KQ+DSR N GG +F KA
Sbjct: 24 IITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGS-KIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSP--RNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACG-KQVDSRKRNGGGVRFGKA 229
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: F0WEQ1_9STRA (Uncharacterized protein AlNc14C76G5101 n=2 Tax=Albugo TaxID=65356 RepID=F0WEQ1_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.940e-31 Identity = 84/237 (35.44%), Postives = 118/237 (49.79%), Query Frame = 1
Query: 109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAID-RTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
+AP FG+S RP ++PGPG+YQ+ ST+ S ++ PS ++ GR+KFGS AID + PGPG Y +VN +EQ+APK++ K A + + PGPG Y +G LST++S+ F G R+ L +T DVGPG+Y + + KQ S F R + S G G Y G+ S Y S+P ++SGR KFGS F
Sbjct: 44 TAPYTVFGSSPRP-KPSNDAKSPGPGSYQIPSTLGKAVLSTVQQAPSCSLSGRDKFGS----AIDVKNAASSPGPGDYTSKVVNLREQNAPKFSLGKKWNSSA-DSNKKGPGPGAYETANCIGPTFLSTQKSNPASAFPRGERTSLTQNNTPDVGPGQYGVVLTSVGKQTISTLSTPASFSFGTQERSKPSKSKALDNAGQGRYYSARSSVGKQSESIYPSSPGISMSGRTKFGSHF 274
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: H3H517_PHYRM (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=H3H517_PHYRM) HSP 1 Score: 122 bits (307), Expect = 7.040e-30 Identity = 94/238 (39.50%), Postives = 123/238 (51.68%), Query Frame = 1
Query: 109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTG-SSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
+AP FG SG P G ++PGPGAYQ+ S+I S + PS ++ GREKFGS DLK+ + PGPG Y IVNP+E+ AP Y+ K P +K PT +G+ VLST++S+ F R L STADVGPG+Y++ +Q S + F R KTG S+ D PGP Y + G V S YR+AP ++SGR KFGS F
Sbjct: 44 TAPVTVFG-SGTRPRTTSGAKSPGPGAYQIPSSIGKPVLSTMVQAPSCSISGREKFGSTADLKSSAKF----PGPGDYTTAIVNPRERAAPSYSLGKKWSPMTGQKXXXXXXXXE-TTPT-IGRTVLSTQKSNPMSSFPKVERKPLRNASTADVGPGQYSVVVEAVGRQAVSTLTSAAAYSFGTESRS-KTGRSTADGVPGPNMYDHKSSV-GWQVESTYRTAPKCSMSGRTKFGSHF 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig248.6731.1 >prot_H-paniculata_contig248.6731.1 ID=prot_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp ARSLGGEALPALGHSSSTSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPPback to top mRNA from alignment at H-paniculata_contig248:17243..21667- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig248.6731.1 ID=mRNA_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4425bp|location=Sequence derived from alignment at H-paniculata_contig248:17243..21667- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig248:17243..21667- >mRNA_H-paniculata_contig248.6731.1 ID=mRNA_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig248:17243..21667- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |