mRNA_H-paniculata_contig24700.6701.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: D8LLF6_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF6_ECTSI) HSP 1 Score: 134 bits (336), Expect = 5.950e-35 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
Query: 1 QMFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
QMFRHG+VHCDPHGA +LVRPHP A + SGRPQLVLLDHGLYR LTE+FRVDHCRLWKAMVFKDIPG
Sbjct: 396 QMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPG 462
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A5A8CRQ7_CAFRO (ABC1 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRQ7_CAFRO) HSP 1 Score: 88.2 bits (217), Expect = 1.050e-18 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 QMFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
Q F+HG +HCDPH ILVRPHP D+ R QLVLLDHGLYR L E+FR D+ RLW +++F D G
Sbjct: 286 QTFKHGFLHCDPHAGNILVRPHPA---DARRAQLVLLDHGLYRELDEKFRGDYARLWTSIIFADEEG 349
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A812UAH5_9DINO (ADCK1 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812UAH5_9DINO) HSP 1 Score: 88.2 bits (217), Expect = 1.110e-18 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 QMFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
Q F+HG +HCDPH ILVRPHP D+ R QLVLLDHGLYR L E+FR D+ RLW +++F D G
Sbjct: 386 QTFKHGFLHCDPHAGNILVRPHPA---DARRAQLVLLDHGLYRELDEKFRGDYARLWTSIIFADEEG 449
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A540K555_MALBA (ABC1 domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540K555_MALBA) HSP 1 Score: 82.4 bits (202), Expect = 4.130e-18 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 4 MFRHGNVHCDPHGAYILVRPHPRAGKD---SGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKD 192
MF+HG VHCDPH A +LVRP P +GK PQL+LLDHGLY++L + R ++ LWKA++F D
Sbjct: 2 MFKHGFVHCDPHAANLLVRPLPGSGKSFLGKKEPQLILLDHGLYKDLDPETRTNYAALWKALIFSD 67
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A8J2S8Y1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8Y1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.640e-18 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 7 FRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
F G+VHCDPH A +LVR P +GRPQLVLLDHGLYR L ++FR++ RLW+A+ D+PG
Sbjct: 366 FHDGHVHCDPHAANVLVRASP-----AGRPQLVLLDHGLYRELDDEFRLEWARLWRALALADVPG 425
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A314ZB28_PRUYE (Putative ABC1 protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZB28_PRUYE) HSP 1 Score: 83.2 bits (204), Expect = 1.250e-17 Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 4 MFRHGNVHCDPHGAYILVRPHPRAGKD---SGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKD 192
MF+HG VHCDPH A +LVRP P +GK +PQLVLLDHGLY+ L + R ++ +LWKA++F D
Sbjct: 37 MFKHGFVHCDPHAANLLVRPLPYSGKSILGKKKPQLVLLDHGLYKELDFETRTNYAKLWKALIFAD 102
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A7S1DP73_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DP73_HEMAN) HSP 1 Score: 83.6 bits (205), Expect = 3.440e-17 Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 QMFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
QMF H VHCDPH + +LVR HP G G PQLVLLDHGLYR L F +++ RLWKA+VF D+
Sbjct: 232 QMFLHRFVHCDPHPSNLLVRRHPSGG---GSPQLVLLDHGLYRELDPDFVLEYSRLWKALVFGDVQA 295
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: A0A2I0VJC7_9ASPA (ABC1 protein n=6 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VJC7_9ASPA) HSP 1 Score: 83.6 bits (205), Expect = 4.570e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 4 MFRHGNVHCDPHGAYILVRPHPRAGKD---SGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
+FRHG VHCDPH A ++VRP P K+ +PQL+LLDHGLY+NL RV++ LWKA++F D+ G
Sbjct: 343 IFRHGFVHCDPHAANMMVRPLPSGRKNLFGQKKPQLILLDHGLYKNLDFATRVNYASLWKALIFADVNG 411
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: F5HFY1_CRYNB (Protein kinase domain-containing protein n=11 Tax=Cryptococcus TaxID=5206 RepID=F5HFY1_CRYNB) HSP 1 Score: 83.6 bits (205), Expect = 4.600e-17 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 7 FRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPGKE 207
F G VHCDPH ILVRPHP G+PQ+VL+DHGLY L +QFR D+CRLW+++ DIP E
Sbjct: 353 FSWGFVHCDPHPGNILVRPHPTK---KGKPQIVLIDHGLYIELPQQFREDYCRLWRSLFVIDIPTIE 416
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Match: UPI001A9E5DA7 (aarF domain-containing protein kinase 1 isoform X2 n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=UPI001A9E5DA7) HSP 1 Score: 82.4 bits (202), Expect = 6.240e-17 Identity = 33/66 (50.00%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 4 MFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVDHCRLWKAMVFKDIPG 201
+F +G VHCDPH +LVR HP D+G+ +++LLDHGLY+ LTE+FR+D+C LW+++++ D+ G
Sbjct: 120 IFVNGFVHCDPHPGNVLVRKHP----DTGKAEVILLDHGLYQVLTEEFRLDYCHLWQSLIWMDMEG 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24700.6701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24700.6701.1 >prot_H-paniculata_contig24700.6701.1 ID=prot_H-paniculata_contig24700.6701.1|Name=mRNA_H-paniculata_contig24700.6701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp MFRHGNVHCDPHGAYILVRPHPRAGKDSGRPQLVLLDHGLYRNLTEQFRVback to top mRNA from alignment at H-paniculata_contig24700:361..585- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24700.6701.1 ID=mRNA_H-paniculata_contig24700.6701.1|Name=mRNA_H-paniculata_contig24700.6701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=225bp|location=Sequence derived from alignment at H-paniculata_contig24700:361..585- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24700:361..585- >mRNA_H-paniculata_contig24700.6701.1 ID=mRNA_H-paniculata_contig24700.6701.1|Name=mRNA_H-paniculata_contig24700.6701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig24700:361..585- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |