mRNA_H-paniculata_contig24686.6692.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24686.6692.1
Unique NamemRNA_H-paniculata_contig24686.6692.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 2.490e-128
Identity = 224/317 (70.66%), Postives = 255/317 (80.44%), Query Frame = 1
Query:    1 QNIWKARCVTEWKVKALPASCEWRSLHNDLVRSLNAVNGTAEFHTS--DYNNVFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDMTTESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            +NIWKARCV +WKV        WR+LH DLV  L+ V+GTAE      DY NV AI++VLD YRTLAEM RACF RLG LL  ++AREA K  D RIM+HALW LK YP+DVD+ LKI+RFLVLAGRP G  EG V+ R PA +G L+AFGPSG+GV AVLACMERH+S+A +QA+ACWS+VNLALI  QKR L R+GG+ XXXXXXXXXXXXXXXXXXXXXXXX LVTPD+T+E  I  DTMKAVV IVVSAIQAFSN+  IVNR CLVLHNIALDPGHL AL+A+GAPEEL+ AIGKHP+D LL QCATGTLRRL
Sbjct:   62 ENIWKARCVEQWKVPPNTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGDYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 378          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: F0Y6I8_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I8_AURAN)

HSP 1 Score: 114 bits (284), Expect = 7.410e-25
Identity = 115/297 (38.72%), Postives = 162/297 (54.55%), Query Frame = 1
Query:   64 EWRSLHNDLVRSLNAVNGTAEFHTSDYNNVFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDMTTESSIPTDTM---KAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            E R LH  ++ + +   G +         V  +  ++  +  +A + R C   L + L  ++AR+A    + R+    +  L A+    ++Q+  +  +V   RP+GG EGMV  R  A +G L AF     G+AAVLA M  H S   +QAM CWS+VNLAL   QK  L++  G+  XXXXXXXXXXXXXXXXXXXXXXX LV P+         D     K VV  V+ A+ AF +   +V  GCLVLHN++LD G++  L+A G    L +A  +H  D  +++ A  TLRRL
Sbjct:  156 ELRRLHRSVLDASSRARGAS---------VDDVSRIMRAHEDVAGVQRRCLETLAERLHCERARKAA--LEARVTAQVVAALWAFLPAAELQVVALHCVVFLARPIGGAEGMVFHRGMASQG-LDAFLGKRGGIAAVLASMRAHGSVDSVQAMGCWSLVNLALNHQQKLELLKLRGLDRXXXXXXXXXXXXXXXXXXXXXXXXLVIPEAGALYEDDLDLKAANKRVVRYVLGAMAAFPDSEKLVRCGCLVLHNLSLDDGNVPHLLAAGVSLPLQRA-ARHHKDADVQRSAVSTLRRL 439          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.900e-23
Identity = 82/286 (28.67%), Postives = 137/286 (47.90%), Query Frame = 1
Query:  151 VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSG-----DGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDMTTESSIPT---------------DTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPG-HLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            +++I+  +  + ++  +   C   L  LL  +Q R   + A   + +  L  +  +P+ V +       +VL  RP+GG EGM+          + + G +G      G+A +L  M R +S A +QAM+CWS+VN+AL   QK VLV+ GGI                         NLV P +   +++ T               + ++ +V +VV A++ + +  AI+NR CLVLHN++L PG H   L+     + L   +  + +D++L+Q ATGTL RL
Sbjct:  854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQRMTAQRAG--LTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRL 1137          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.310e-22
Identity = 97/317 (30.60%), Postives = 142/317 (44.79%), Query Frame = 1
Query:   49 LPASCEWRSLHNDL----VRSLNAVNGTAEFHTSDYNNVFAIIEVLDVYRTLAEMARA------CFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDMTTESSIPTDTMKA--------VVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            L +S  WR   +DL    V +L  ++ T    T   +       + D+ R +++ AR       CF  L   L  +  R+     D  +    +  L  + E  D+Q+  +  +V   RP+GG EGMV  R  A  G     G SG G+AAVL  M  H  ++ +QAM CWS+VNLAL   QK  L+   G+                         NLV P+     S+ T+TM          VV  V++A++ F     +V  GCLVLHN++LD  ++  L+A G    L +A   H  D  +++ A  TLRRL
Sbjct:  146 LCSSTPWRIHRSDLEHRPVNALRRLHRTVVEATDSVDTA----PIADIARIMSDHARVAGVQVRCFRTLADRLHCETFRKNA--LDCGVASSVVRALWKFDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMASRGLDAFLGESG-GIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEA---GSVSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSH-KDADVQRSAVSTLRRL 451          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.280e-21
Identity = 82/269 (30.48%), Postives = 121/269 (44.98%), Query Frame = 1
Query:  211 CFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVL-PRLPACEGALKAFGPSG-DGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPD---------------------MTTESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPG-HLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            C   L  LL  +  R   + A   + +  L  +  +P+ V++       LVL  RP+GG EGM+    +    G       +G +G+A +L  M R      +QAM+CWSMVN+ALI  QK +LV+ GGI                         NLV P                       TTE  +  + +  +  +VV A++ F +  AI+NR CLVLHN++L+   H + L      + L   IG +  DR+L+Q A GTL+RL
Sbjct:    7 CLKVLPFLLEDENQRTTAQRAG--LTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHSAMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRL 273          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC)

HSP 1 Score: 103 bits (256), Expect = 1.120e-20
Identity = 80/281 (28.47%), Postives = 130/281 (46.26%), Query Frame = 1
Query:  151 VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVL-PRLPACEGALKAFGPSG----DGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTP----------DMTTESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPG-HLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            +F+I+  +  +  +  +   C   L  LL  +Q R   + A   + +  L  +  +P+   +       +VL  RP+GG EGM+    +    G   A   +      G+A +L  M+R Q    +QAM+CWS+VN+AL   QK VLV  GGI                         NLV P          ++ TE  +  +++  ++ +V+ A++ F    AIVNR CLVLHN++L    H + L      + L   +  +P+D++L+Q A+GTL RL
Sbjct:  726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQRAG--LTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRL 1004          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.180e-20
Identity = 80/289 (27.68%), Postives = 127/289 (43.94%), Query Frame = 1
Query:  151 VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSG--DGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDMT---------------------TESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPG-HLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            +++I+  +  +  +  +   C   L  LL  +  R   + A +  +   L  +  +P+ V +       +VL  RP+GG EGM+          +   G  G  +G+A +L  M R  S   +QAM+CWS+VN+AL   QK VLV+ GGI                         NLV P +                      TE  +  + +  +  +VV A++ F +   I+NR CLVLHN++L    H + L      + L   +  +PSD++L+QCA GTL RL
Sbjct:  355 IYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQRTTAQRAGLTGI--VLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRL 641          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A7S3JW95_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW95_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.440e-20
Identity = 86/337 (25.52%), Postives = 152/337 (45.10%), Query Frame = 1
Query:    4 NIWKARCVTE-WKV-------KALPASCEWRSLHNDLVRSLNAVNGTAEFHTSDYNNVFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDM--------------TTESSIPTDTMKA-VVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            NIW   C  + W++       +    + E+R LH +L+ +++              +V  +  ++  ++ +  +   C  RL   L  ++ R+  +  D ++    ++ L+ Y  + ++Q   +  +V   RP+GG EGMV  R     G L+AF     G+  VL  M+ H S + +QA+ CWS+VNLAL   QK  ++ + GI                         NLV P+               T  + +P DT+   ++  V+ A+  F +   ++  GCLVLHN++L P ++  L A    + L++A   H +D  +++ A  TLRRL
Sbjct:  150 NIWFPLCTAKPWQMSWSDLEERGYSTASEFRELHTNLIHAIDIARR---------GDVAQVANIMKEFQDVIGLQYECLERLIIALHCERVRK--RAIDAKLASCVIYILQRYSHNTELQSMALHCIVFLARPIGGAEGMVFCRGVHSNG-LEAF--LYGGIDIVLDAMKNHISSSVVQAVGCWSLVNLALNRQQKIDILTKNGIQCIIRAMQIHPHCLDVQFRALFALINLVIPENVQQQFNQNDPHNTNTNNTFLPQDTISHDILDHVLIAMDRFGDSDKLIRCGCLVLHNLSLRPTNIPILQANNTSKPLLRAARTH-NDHDVQRSAISTLRRL 471          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A1E7FRR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRR6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.640e-19
Identity = 80/313 (25.56%), Postives = 131/313 (41.85%), Query Frame = 1
Query:  151 VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDM-----------------------------------------------TTESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQ-AIGKHPSDRLLRQCATGTLRRL 945
            +++I+  +  +  +  +   C   L  LL  +Q R     A   + +  L  +  + E   + +     LVL  RP GG EGM+        G          G+A +L  M R + +A + AM+CW++VN+AL++DQK VLV+ GGI                         NLV P +                                               TTE  I  D ++ V ++VV  ++ F +  AI+NR CLVLHN++L   + S L+      ++++  +  + +D++L+Q ATGTL RL
Sbjct:   26 IYSIVNWMVAFSDVEGIQTLCMKVLPVLLENEQHRLTANSAG--LADVVLRAMVMFSESAQLHIASFHTLVLLSRPHGGKEGMLFHNSMTAGGIFGGGCHGKSGIAVMLDSMRRFEDNAALLAMSCWALVNIALVSDQKAVLVKLGGIQAITNAMYRHPFSAELQFRALFALINLVIPSVEDNNDNANVDVDGDGAPGVAVVPPRQIAEGAAAAAASIQEQLGELNETTEKEIIDDLVEDVASLVVRVMKNFCSSEAIINRACLVLHNLSLTEDYHSILLWTPQCYQMLEWCVANYRTDQVLQQSATGTLHRL 336          
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO)

HSP 1 Score: 99.0 bits (245), Expect = 3.020e-19
Identity = 76/282 (26.95%), Postives = 130/282 (46.10%), Query Frame = 1
Query:  151 VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHALWTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGPSGD-----GVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGIXXXXXXXXXXXXXXXXXXXXXXXXXNLVTPDM-----------TTESSIPTDTMKAVVTIVVSAIQAFSNIAAIVNRGCLVLHNIALDPGHLSALM-AMGAPEELVQAIGKHPSDRLLRQCATGTLRRL 945
            +++I+  +  +  +  +   C   L  ++  +  R A + A   +  + L  +  +P+   +       +VL  RP+GG EGM+         ++   G   D     G+A +L  ++R +    +QAM+CWS+VN+AL   QK++LV+ GGI                         NLV P +            +E  +    +  VV +VV+A++ F +  AI+NR CLVLHNI+L   +  AL+      + L   +  + SD++L+Q A GTL RL
Sbjct:  684 LYSIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQRAG--LTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRL 963          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24686.6692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JC51_9PHAE2.490e-12870.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0Y6I8_AURAN7.410e-2538.72Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3LG40_9STRA6.900e-2328.67Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3ZUP6_9STRA2.310e-2230.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2MKG5_9STRA5.280e-2130.48Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7FR68_PHATC1.120e-2028.47Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6T9YI25_9STRA3.180e-2027.68Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S3JW95_9STRA3.440e-2025.52Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1E7FRR6_9STRA1.640e-1925.56Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A1Z5JKA1_FISSO3.020e-1926.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24686contigH-paniculata_contig24686:1962..3309 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-12_007670.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Taxonomic scopeEukaryota
Seed ortholog score385.6
Seed ortholog evalue2.3e-104
Seed eggNOG ortholog2880.D7FLC7
Hectar predicted targeting categoryother localisation
EggNOG OGs2C8IF@1,2S3J3@2759
Model size945
Cds size945
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24686.6692.1prot_H-paniculata_contig24686.6692.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24686 1962..3309 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929718.5163128-CDS-H-paniculata_contig24686:1961..21801622929718.5163128-CDS-H-paniculata_contig24686:1961..2180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 1962..2180 -
1691480981.0141501-CDS-H-paniculata_contig24686:1961..21801691480981.0141501-CDS-H-paniculata_contig24686:1961..2180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 1962..2180 -
1622929718.532133-CDS-H-paniculata_contig24686:2305..26891622929718.532133-CDS-H-paniculata_contig24686:2305..2689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 2306..2689 -
1691480981.0259624-CDS-H-paniculata_contig24686:2305..26891691480981.0259624-CDS-H-paniculata_contig24686:2305..2689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 2306..2689 -
1622929718.5441158-CDS-H-paniculata_contig24686:2967..33091622929718.5441158-CDS-H-paniculata_contig24686:2967..3309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 2968..3309 -
1691480981.034987-CDS-H-paniculata_contig24686:2967..33091691480981.034987-CDS-H-paniculata_contig24686:2967..3309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24686 2968..3309 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24686.6692.1

>prot_H-paniculata_contig24686.6692.1 ID=prot_H-paniculata_contig24686.6692.1|Name=mRNA_H-paniculata_contig24686.6692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
QNIWKARCVTEWKVKALPASCEWRSLHNDLVRSLNAVNGTAEFHTSDYNN
VFAIIEVLDVYRTLAEMARACFGRLGQLLAGDQAREATKYADVRIMEHAL
WTLKAYPEDVDMQLKIMRFLVLAGRPVGGTEGMVLPRLPACEGALKAFGP
SGDGVAAVLACMERHQSHAGIQAMACWSMVNLALITDQKRVLVREGGISA
IVRAMSRHPEDGEVHFRAMFALINLVTPDMTTESSIPTDTMKAVVTIVVS
AIQAFSNIAAIVNRGCLVLHNIALDPGHLSALMAMGAPEELVQAIGKHPS
DRLLRQCATGTLRRL
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mRNA from alignment at H-paniculata_contig24686:1962..3309-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24686.6692.1 ID=mRNA_H-paniculata_contig24686.6692.1|Name=mRNA_H-paniculata_contig24686.6692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1348bp|location=Sequence derived from alignment at H-paniculata_contig24686:1962..3309- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAATATTTGGAAGGCAAGGTGCGTAACGGAGTGGAAGGTGAAGGCGCT GCCGGCGTCGTGCGAGTGGCGCTCCCTTCACAACGACCTTGTGCGGTCCT TGAACGCTGTTAACGGAACGGCGGAGTTTCACACGAGCGACTACAACAAC GTATTCGCTATCATCGAGGTGCTTGATGTGTACCGCACTCTGGCCGAGAT GGCCCGCGCCTGTTTTGGCCGGCTGGGGCAACTGCTCGCCGGTGACCAGG CTCGTGAGGCAACCAAGTATGCTGACGTTCGTATTATGGAGCATGCCCTT TGGACGCTCAAAGCCTATCCCGAGGATGTCGACATGCAGTTGGTGAGAAT GATGTCTACTCTCTTGTGCAACTCAGTTAACCGTGTGCCTGTTGTTTTGT TGGATTCAGTTGCGTCATGGATGCAAACCGACAACCCTCGGTAACTTGGC GTAACGCCCTTCGCATGTTTCTTGTATCCATTTGTTTTTTTGTCAGCTGC GTTTGCTCCAAGCGAGCAAAGTGACTCATTTGTTCCAGACTGTCACAAAG TACCAGAAATATATGTTGAGAACTCTACTCACACGTTGAGCTCTGCCCAA TCGTGCTTGTATTGTATCAGAAAATTATGCGCTTCCTCGTCCTGGCCGGA CGTCCCGTAGGAGGTACGGAGGGCATGGTTTTGCCCCGCCTGCCTGCCTG CGAGGGTGCCCTTAAAGCTTTCGGCCCTTCTGGCGACGGAGTTGCGGCCG TCCTTGCTTGTATGGAGAGACACCAGTCCCATGCAGGCATTCAGGCGATG GCTTGCTGGAGCATGGTTAACCTCGCGTTAATCACAGACCAGAAGAGGGT GCTGGTCCGCGAGGGCGGCATTTCGGCCATCGTCCGGGCTATGTCTCGGC ACCCTGAGGATGGCGAGGTGCACTTTCGGGCGATGTTCGCTCTCATCAAC CTGGTGACACCAGACATGACAACCGAGAGCTCTATCCCAACTGACACTAT GAAGGTAAAGAAGCAACTGCAGCAGGAAATTCACCCACATGAATTTGATT GTTCACGTCGTTAATACACGTTTCACAAGTATTGTTTTTCATTTTGTATG TCTTGCGTTTTGCGGTGATATATCTCCAGGCTGTCGTGACAATCGTGGTT TCGGCGATCCAGGCCTTCTCCAATATCGCCGCAATCGTTAACCGCGGATG CCTCGTGCTCCACAACATTGCACTGGATCCGGGACACTTGAGCGCTCTGA TGGCCATGGGAGCCCCCGAAGAGTTGGTGCAAGCCATTGGCAAGCACCCG TCGGACCGGTTGCTCCGTCAGTGTGCGACCGGCACTCTGCGGCGTCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig24686:1962..3309-

>mRNA_H-paniculata_contig24686.6692.1 ID=mRNA_H-paniculata_contig24686.6692.1|Name=mRNA_H-paniculata_contig24686.6692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig24686:1962..3309- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAATATTTGGAAGGCAAGGTGCGTAACGGAGTGGAAGGTGAAGGCGCT
GCCGGCGTCGTGCGAGTGGCGCTCCCTTCACAACGACCTTGTGCGGTCCT
TGAACGCTGTTAACGGAACGGCGGAGTTTCACACGAGCGACTACAACAAC
GTATTCGCTATCATCGAGGTGCTTGATGTGTACCGCACTCTGGCCGAGAT
GGCCCGCGCCTGTTTTGGCCGGCTGGGGCAACTGCTCGCCGGTGACCAGG
CTCGTGAGGCAACCAAGTATGCTGACGTTCGTATTATGGAGCATGCCCTT
TGGACGCTCAAAGCCTATCCCGAGGATGTCGACATGCAGTTGCAGAATAT
TTGGAAGGCAAGGTGCGTAACGGAGTGGAAGGTGAAGGCGCTGCCGGCGT
CGTGCGAGTGGCGCTCCCTTCACAACGACCTTGTGCGGTCCTTGAACGCT
GTTAACGGAACGGCGGAGTTTCACACGAGCGACTACAACAACGTATTCGC
TATCATCGAGGTGCTTGATGTGTACCGCACTCTGGCCGAGATGGCCCGCG
CCTGTTTTGGCCGGCTGGGGCAACTGCTCGCCGGTGACCAGGCTCGTGAG
GCAACCAAGTATGCTGACGTTCGTATTATGGAGCATGCCCTTTGGACGCT
CAAAGCCTATCCCGAGGATGTCGACATGCAGTTGAAAATTATGCGCTTCC
TCGTCCTGGCCGGACGTCCCGTAGGAGGTACGGAGGGCATGGTTTTGCCC
CGCCTGCCTGCCTGCGAGGGTGCCCTTAAAGCTTTCGGCCCTTCTGGCGA
CGGAGTTGCGGCCGTCCTTGCTTGTATGGAGAGACACCAGTCCCATGCAG
GCATTCAGGCGATGGCTTGCTGGAGCATGGTTAACCTCGCGTTAATCACA
GACCAGAAGAGGGTGCTGGTCCGCGAGGGCGGCATTTCGGCCATCGTCCG
GGCTATGTCTCGGCACCCTGAGGATGGCGAGGTGCACTTTCGGGCGATGT
TCGCTCTCATCAACCTGGTGACACCAGACATGACAACCGAGAGCTCTATC
CCAACTGACACTATGAAGAAAATTATGCGCTTCCTCGTCCTGGCCGGACG
TCCCGTAGGAGGTACGGAGGGCATGGTTTTGCCCCGCCTGCCTGCCTGCG
AGGGTGCCCTTAAAGCTTTCGGCCCTTCTGGCGACGGAGTTGCGGCCGTC
CTTGCTTGTATGGAGAGACACCAGTCCCATGCAGGCATTCAGGCGATGGC
TTGCTGGAGCATGGTTAACCTCGCGTTAATCACAGACCAGAAGAGGGTGC
TGGTCCGCGAGGGCGGCATTTCGGCCATCGTCCGGGCTATGTCTCGGCAC
CCTGAGGATGGCGAGGTGCACTTTCGGGCGATGTTCGCTCTCATCAACCT
GGTGACACCAGACATGACAACCGAGAGCTCTATCCCAACTGACACTATGA
AGGCTGTCGTGACAATCGTGGTTTCGGCGATCCAGGCCTTCTCCAATATC
GCCGCAATCGTTAACCGCGGATGCCTCGTGCTCCACAACATTGCACTGGA
TCCGGGACACTTGAGCGCTCTGATGGCCATGGGAGCCCCCGAAGAGTTGG
TGCAAGCCATTGGCAAGCACCCGTCGGACCGGTTGCTCCGTCAGTGTGCG
ACCGGCACTCTGCGGCGTCTTGCTGTCGTGACAATCGTGGTTTCGGCGAT
CCAGGCCTTCTCCAATATCGCCGCAATCGTTAACCGCGGATGCCTCGTGC
TCCACAACATTGCACTGGATCCGGGACACTTGAGCGCTCTGATGGCCATG
GGAGCCCCCGAAGAGTTGGTGCAAGCCATTGGCAAGCACCCGTCGGACCG
GTTGCTCCGTCAGTGTGCGACCGGCACTCTGCGGCGTCTT
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