mRNA_H-paniculata_contig2458.6666.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A6H5JVE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE7_9PHAE) HSP 1 Score: 579 bits (1493), Expect = 2.220e-191 Identity = 328/511 (64.19%), Postives = 379/511 (74.17%), Query Frame = 3
Query: 648 LLGISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTG-----------------------------KSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQWGVLGIWGCITLKFIGRFSAAAFRVMDRKTGPYWVLRAPEGSK 2093
LLG+S+HDGQI +LALPAL+SLLVDP+LSLVDTAYVGRGLGAISLAALGPCTSIF FSFNTFR+LTQSTT+LV SLAAGN+++AGQIVQQMYV++ +LG L LLTQ+ ILALMGAG +TALF +AS YL RA+AAPAV++IMVSEGVFRGHADTRAPAVAAL+AAV NI++DP+FMF L G+ GAAGATA AQY+AV +YG+MLWRG+R G M VPF N +G + DGD+ + A +RTTSLMACW VATAVATR+SSAAVGAHQV LSLWLLFAL+AEAPSIAAQVLG RYI QGKLE ARSMARRV LTL SGFLA++LL SGV+P+ FTSDP +L+RL LLPLLA QQPLV++TLV EGLLVGAG+FRWL TT SSAV +WF+L +GR AP W VLGIWG IT F+GRF AA+RVMDRK GP+WV+ A SK
Sbjct: 120 LLGVSQHDGQISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSLAAGNEEEAGQIVQQMYVIACVLGVGLQVTLLTQAPSILALMGAGPKTALFREASGYLKVRALAAPAVLLIMVSEGVFRGHADTRAPAVAALSAAVTNILLDPVFMFTLSMGVAGAAGATAFAQYLAVAIYGAMLWRGAREGRMAVPFFGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISARGV---VALGDGDIG-------------------ECSYASQVRTTSLMACWAVATAVATRMSSAAVGAHQVALSLWLLFALIAEAPSIAAQVLGARYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQFRWLATTTVGSSAVAAWFILMVGRRAPGWDVLGIWGGITAMFVGRFLGAAWRVMDRKRGPFWVVPASPTSK 608
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: D7FUX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX8_ECTSI) HSP 1 Score: 383 bits (984), Expect = 5.130e-120 Identity = 221/334 (66.17%), Postives = 255/334 (76.35%), Query Frame = 3
Query: 921 MYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAV 1922
MYV++ +LG L LLTQ+ ILALMGAG +TALF +AS YL RA+AAPAV++IMVSEGVFRGHADTRAPAVAAL+AA NI++DP+FMF L G+ GAAGATA AQY+AV +YG+MLWRG+R G M VPF + + A LL+ V+SANAAMLLRTTSLMACW VATAVATR+SSAAVGAHQV LSLWLLFAL+AEAPSIAAQVLG RYI QGKLE ARSMARRV LTL SGFLA++LL SGV+P+ FTSDP +L+RL LLPLLA+QQPLV++TLV EGLLVGAG+FRWL TT SSAV
Sbjct: 1 MYVIACVLGVGLQVTLLTQAPSILALMGAGPKTALFREASGYLKVRALAAPAVLLIMVSEGVFRGHADTRAPAVAALSAAFTNILLDPVFMFTLSMGVAGAAGATAFAQYLAVAIYGAMLWRGAREGRMAVPFFGARGKRXXXX------XXXXXXXXXXXXXXAPAAWSLLVTVISANAAMLLRTTSLMACWAVATAVATRMSSAAVGAHQVALSLWLLFALIAEAPSIAAQVLGARYIAQGKLENARSMARRVLTLTLACSGFLATSLLCLSGVIPRCFTSDPEVLKRLHQLLPLLAVQQPLVALTLVAEGLLVGAGQFRWLATTTVGSSAV 328
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A835YXE7_9STRA (Mate-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE7_9STRA) HSP 1 Score: 379 bits (974), Expect = 4.980e-117 Identity = 224/425 (52.71%), Postives = 293/425 (68.94%), Query Frame = 3
Query: 837 ALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGE-GGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQWGVLGIWGCITLKFIGRFSAAAFRVMDRKTGPYWVL-RAPEGSKEAGG 2105
ALT STTSLVS +LA GN + AG++ QQ +L+ +LG + A LLT++ +L+LMGAG + L+ A +YLTTRA+AAPAV+++ V EG+FRGH +TR PA+A+L AAVAN+I+DP+ MF G G+ GAA AT AQY+A+ Y + R RAG M +P L K + + G EG GG+ + L LL V+ ANAAML+RT SLMACW AT+VATR+ + VGAHQV LS+WLL ALVAEAPSIAAQVLG RY+G+G+L AR+MA RV LT+ S L + L G LP FT DPA+ R+ L+PLLA+QQPLV+ TL+ EGLLVGA +FRWLGATT ++++V + +L +GR P+ GV+G+W IT F+GRF AA+R++DRK GPYWV R G + GG
Sbjct: 30 ALTHSTTSLVSKNLAQGNPEAAGEVAQQSMLLALVLGLGVGALLLTRARPMLSLMGAGPGSVLYNDAHSYLTTRALAAPAVLLLTVCEGLFRGHGNTRTPAIASLLAAVANLILDPILMFKCGLGVRGAAQATVCAQYLALATYAGFIARDVRAGRMRLPALAKALGRKEE-------PAPGGAGGGEGRAGGAPRGLELLRVVLFANAAMLVRTVSLMACWAAATSVATRMGTVHVGAHQVALSVWLLLALVAEAPSIAAQVLGARYLGRGELRAARAMAARVVALTVASGALLGAALAAARGALPAAFTRDPALAARIGALVPLLALQQPLVAATLLMEGLLVGAQQFRWLGATTLVTTSVGTAAVLAVGRLRPEAGVVGVWWGITGMFVGRFLGAAWRLLDRKRGPYWVPERGVGGEGDEGG 447
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A7S3XLC3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC3_HETAK) HSP 1 Score: 325 bits (833), Expect = 6.620e-96 Identity = 217/520 (41.73%), Postives = 291/520 (55.96%), Query Frame = 3
Query: 657 ISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWR------------GSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRH--------------------APQWGVLGIWGCITLKFIGRFSAAAFRVMDRKTGPYWVLRAPE----GSKEAGGT 2108
++EHD I + LPAL+ ++DP +SL+D+AY GR LGA SLAALGPCTSIF FSFNTFRALT +TT+LV+ +A K++AGQ+ +Q L+ LG L ++ L LMG G+++ L P A YL RA+ AP V+ +M EG+FRGH DT P VA AA N +DP+ MF LG G++GAA AT +A+ VA G+YG +L R G A V+ N R+ G L ++GE L LL ++ AN AM R+ SLMA W ATA ATR+ +A V AHQV LSLWL ALV EAP +AAQ+L GRY GK ++ +S+ RR+ + TS + + L + G LP+ F +DP +L R LL +L +QQP+V +TLV E LVG G+F +L T S+A T+ + +GR AP+ V+ +W C+T F R A A R+ D GP L E S +AG T
Sbjct: 1 MNEHDRDIRDITLPALVGAMIDPAMSLIDSAYAGR-LGATSLAALGPCTSIFHFSFNTFRALTFTTTALVAKYVAMNRKEQAGQVGKQSLALALTLGLLTAGALAALATPFLRLMGVGARSPLLPHALPYLKVRALVAPVVLCMMAMEGIFRGHGDTLTPLVAGAAAAAVNFSLDPILMFRLGMGVSGAAAATCIAEVVAAGIYGFLLLRRREQFGFAPPQPGPDAPAPVLGAKKPLPNLSRRRARRPLRAVVGGL--VQGE------LALLRTLLVANGAMFARSLSLMATWACATATATRLGTAHVAAHQVVLSLWLFLALVVEAPGVAAQILAGRYHSVGKTKQLQSLLRRLIIVVFTSGCTMGALLWVGRGALPRLFATDPEVLSHCRRLLDILVLQQPVVGLTLVLESFLVGCGQFAYLARATVASAAATAGLIQLVGRGVLPGALARLLPGGGLPAAAAAPE--VVHVWHCLTGFFFLRLVAVALRLADPVRGPLKPLVIAEEEEGNSSDAGST 509
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A4D9CNC1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNC1_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.160e-74 Identity = 204/503 (40.56%), Postives = 272/503 (54.08%), Query Frame = 3
Query: 612 KQPAKTKGLGRSLLGISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQV---LGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQL---GRHAPQWGVLGIWGCITLKFIGRFSAAAFRVMDRKTGPYWVLRAPEGSKEAG 2102
+ P+ L R G+SEHD +I ++LPALL+LLVDP LSL DTAYV R LG + LA LGPCTSIF SFN FRA +QSTT+LVS +LA ++ + +V Q +L+ +LG + A L Q++RILALMGA + + L YL RA+AAPAV+M+MV EG +RG ADT P T A+ N+++DP +F G G A +G G + G R G + SDG G PLL SAN AML+R SLM W +ATA ATR+S+ V AHQ+ LS+WL ALV+EAP IAAQV + R L +S+ARR+ L L + LL LP FTSDP +L ++R L+ L+ +Q PLV++TL+ E LVG G F L +T++S + L + GR Q GV+ IW I F+ R A+ + + +G VLR G + G
Sbjct: 140 RTPSSPSFLSRLRPGMSEHDAEIARISLPALLTLLVDPFLSLCDTAYVSR-LGTLPLACLGPCTSIFHLSFNGFRAFSQSTTALVSGALAQQDRDRVRAVVVQALILACVLGTLVSAVLNIQATRILALMGAPAGSRLSATGLPYLKVRALAAPAVLMLMVGEGAYRGFADTLTPLPITFTVALVNLVLDPWLIF------PGRVGGRA-----GMGRGGRRV--GDRGGAIC--------------------GSDGLFGAALWPAGDE---PLL----SANGAMLVRNGSLMLVWALATATATRMSTMDVAAHQIALSIWLFAALVSEAPGIAAQVGEVMAARLHSLHNLPALQSLARRLVQAGLVIGTGLGAILLALRHALPPVFTSDPGVLGKMRALMVLIGLQLPLVAVTLIGESFLVGCGRFASLAGASTLASTACAVVLGAMQGGGRGWGQGGVVSIWLAIKGLFVLRLGCVAWLLYNPWSG---VLRRKGGWEGEG 598
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A0G4EWE7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWE7_VITBC) HSP 1 Score: 256 bits (654), Expect = 2.270e-70 Identity = 174/445 (39.10%), Postives = 247/445 (55.51%), Query Frame = 3
Query: 657 ISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTA--LFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQWGVLGIW 1985
+S I L++PALL LVDP LS +D YVGRGLGA SLAALGPC SIF SF FRAL QSTTSLV+ +L A + +AG++V Q L+ +G + A L IL MG G+ L A AYL RA AAP+V+ V+EG FRG DT+ P A+L AAV N+I+DP+ +F+ WG GAA ATA+AQY A Y + +R + + VP L G S+ A+ L +SA++AML+R+ SL+ CW TA AT++ V AH L L+L+FA+ EA +++ QVL GRY G + ++ + ++ + S L+ L +P +F SD A+ RL L+P++A+ +PL + LV EG LVG G F+WLG + +++ ++ + + R P G+ +W
Sbjct: 111 VSHLQKTIRDLSVPALLGNLVDPALSTIDNIYVGRGLGATSLAALGPCISIFHVSFGIFRALMQSTTSLVARALGARDNDRAGELVVQSSFLAVGMGVIIAAALQLLCGPILGCMGVGAVGVDPLALDARAYLKARAWAAPSVVFTQVAEGAFRGFGDTKTPLFASLLAAVVNLILDPIMIFSCQWGTAGAAAATAVAQYAAALTYAVLFYRRRESMRLKVPSLQGLSS----------------------------AVTTLRRYLSASSAMLVRSFSLLVCWATITASATKMGVVHVAAHNAILQLFLIFAMGGEAIAVSTQVLIGRYSGAKQPKQIGQVLKQCLKIAAACSCLLSGLLFALRPSIPSWFGSDAAVRGRLLSLIPVVALLEPLTWLVLVFEGSLVGMGRFKWLGGSMLLATLASAGIIRHIAR-LPGAGIRLLW 526
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: B7GCL3_PHATC (Uncharacterized protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCL3_PHATC) HSP 1 Score: 248 bits (633), Expect = 8.260e-69 Identity = 191/465 (41.08%), Postives = 253/465 (54.41%), Query Frame = 3
Query: 711 LLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGS------VKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMA---RRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQWGVLGIW--GCITLKFIGRFSAAA------FRVMDRKT 2054
+L DPVLSL+DTAYVGR LG++ LAALG CTSIF +FN FRA T +TTSLVS+ L +++KA ++ Q +L +G + L ILA MG S + LFP A AYL R AAP V+ I V+EG FRG+ DT P VA+LTAA N+++DP+ MF LGWG+ GAA ATALAQ+ A +Y L R + ++P L +S ++ ++ AN AM+ + SL+ W ATA ATR+ +A V AHQVGLS+WL+FAL+ + ++AAQVL R R++ +VA L S L L +LP FT D + L L+P LA QQ LVS+TLV E L VGA EFR L TT+++ + + L Q Q V GIW G +TL F GR AA +R + R+T
Sbjct: 1 MLADPVLSLIDTAYVGR-LGSVPLAALGACTSIFHLAFNAFRATTAATTSLVSSRLQQ-DEQKAREVTQTSLLLGVTMGLAVAVTLWAAGRPILASMGVPSDSVLFPDACAYLYARCGAAPVVLWIGVAEGAFRGYGDTIVPLVASLTAAAINLVLDPILMFTLGWGVRGAAAATALAQFGAAIVYAVQLKRRN-----MLPALRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRWDVIRTILGANVAMMTKQGSLLLAWAYATAKATRMGAAHVAAHQVGLSVWLVFALILDGAAVAAQVLASRAYANRDRAAVRTLLWYFTKVALLQGVVSLLLVDGL---DWILPGLFTPDRTVQAHLHRLVPYLAAQQVLVSLTLVWESLAVGAQEFRSLAVGTTLATVASVYQLRQ------QTTVEGIWKVGIVTL-FAGRLLTAAVANIRAYRKLPRQT 448
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR) HSP 1 Score: 233 bits (594), Expect = 1.120e-63 Identity = 171/454 (37.67%), Postives = 249/454 (54.85%), Query Frame = 3
Query: 651 LGISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPL---LMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQWGVLGIW-GCITL 2000
L ++ +D I +LALPAL +L DP++SLVDTA+VGR LG++ LAALG T++F +F F L TT +V+ SL G+++ AG+ V Q L+ + GG +A L ++ +L LMGAG + L A YL RA+A PA+++I G FRG+ DTR P + L + N+ +DPLF+F GWG+ GAA AT +AQ W G+ V+ A G SV ALP L V +L+RT +L++ T+ATAVATR+ V AHQV LWL ALV +A ++AAQ L RY G G+ AR++A R+ LA+ +F+ VLP+ FT DPA+++ + + P +A+ QPL ++ V +G+L+G +FR+L +S+A + LL + WG+ G+W G TL
Sbjct: 5 LRVNPYDRDILALALPALGTLAADPLVSLVDTAFVGR-LGSVPLAALGVNTALFSLAFVVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEE--LVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQ-----------WAGALGFVWVL------------------------FARRRALGISV-ALPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAACGALVLLLV--LPLGWGLTGVWWGVATL 417
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A7Y3EE14_9BACT (MATE family efflux transporter n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3EE14_9BACT) HSP 1 Score: 225 bits (574), Expect = 1.130e-60 Identity = 168/459 (36.60%), Postives = 245/459 (53.38%), Query Frame = 3
Query: 621 AKTKGLGRSLLGISEHDGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSDGDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLLQLGRHAPQ-WGVLGIWGCI 1994
A+ + G + D ++ LALPAL +L DP++S+VDTA+VGR LG + LAALG S+F +F F L TT +V+ +LA G+++ AG++ + L+ G A LL + +LALMGA + L A +YL RA+A PAV+++ G+FRG DTR P L + N+++DPL +F LGWG+ GAA AT +AQ+ ++ +L G+R M + + R PLL A+L+RT SL++ T+ATAVATR+ +A V AHQV LWLL ALV +A ++AAQ + +G + +EAR + R+ L LA+T LP+ FTSDP + R+ LLP + QPL ++ V +G+L+GA FR L +S+AV + LL R P WG+ G+W I
Sbjct: 15 AEAEARGSPVTSNRSIDARVVGLALPALGALAADPLVSIVDTAFVGR-LGVVPLAALGVNASVFSLAFVVFNFLAYGTTPMVARALARGDRRAAGKLAVEALTLACAAGVVATALLLALAEPVLALMGATGE--LGAPALSYLRIRALAGPAVLIVTAGHGIFRGWQDTRTPLWITLGLNLVNLVLDPLLIFGLGWGLEGAAIATVVAQWSGAALF-LVLILGTRREAMGIELRLPRPRDLR---------------------------PLLRV----GGALLIRTLSLVSTLTLATAVATRLGTAQVAAHQVASQLWLLLALVVDALAVAAQAM----VGGAEEDEARRVGNRILLWGLIVGIVLAATFAAARPWLPRLFTSDPDAVSRVDRLLPFIIWMQPLNAVVFVWDGILMGAQRFRILAVQMLLSAAVAAALLL---RVVPSGWGLDGVWWAI 431
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Match: A0A7Y2HRG9_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2HRG9_9BACT) HSP 1 Score: 224 bits (570), Expect = 1.470e-60 Identity = 168/446 (37.67%), Postives = 233/446 (52.24%), Query Frame = 3
Query: 669 DGQICSLALPALLSLLVDPVLSLVDTAYVGRGLGAISLAALGPCTSIFQFSFNTFRALTQSTTSLVSTSLAAGNKKKAGQIVQQMYVLSSILGGCLMAGLLTQSSRILALMGAGSQTALFPQASAYLTTRAIAAPAVMMIMVSEGVFRGHADTRAPAVAALTAAVANIIIDPLFMFALGWGMTGAAGATALAQYVAVGMYGSMLWRGSRAGTMVVPFLTGKSNSKRKGTDTDTSRSD-GDLATLEGEGGSVKALPLLMAVVSANAAMLLRTTSLMACWTVATAVATRISSAAVGAHQVGLSLWLLFALVAEAPSIAAQVLGGRYIGQGKLEEARSMARRVAFLTLTSSGFLASTLLIFSGVLPKFFTSDPAILQRLRVLLPLLAIQQPLVSMTLVTEGLLVGAGEFRWLGATTTISSAVTSWFLL---QLGRHAPQWGVLGIWGCI 1994
DG+I +LALPAL +L DP++S+VDTA+VGR LG + LAALG TS+F +F F L TT LV+ ++ G+++ AG + L + G + L + +LA MGA + L A YL RA A PAV+++ G+FRG DTR P + L N+++DPL +F GWG+ GAA AT +AQ+V LW FL ++R+ R DL L GG A+L+RT SL+ T+ATA ATR+ AV AHQV + LWLL ALV +A ++A Q + IG+ EEAR +ARR+ LA + + LP+ FT DP + R+ LLP + QPL + V +G+ +GAG FR+L +SSAV + LL LG WG+ G+W I
Sbjct: 2 DGRIVALALPALGALAADPLVSIVDTAFVGR-LGVVPLAALGVNTSVFALAFVVFNFLAYGTTPLVARAVGRGDREAAGDLALHALTLGLVAGIGALVLLQLLAEPVLAAMGASGE--LRAPALTYLRIRACAGPAVLLVTAGHGIFRGWQDTRTPLIVTLGLNAVNLVLDPLLIFGFGWGLAGAAIATVIAQWVGA------LW-----------FLRLILGTRREALGVRLHRPRLADLVPLGRVGG----------------ALLIRTLSLIGTMTLATATATRMGVLAVAAHQVAMQLWLLLALVVDALAVAGQAM----IGEAPREEARRIARRLLLWAAGVGAVLALSFAVGRPWLPRIFTDDPEAISRVDELLPFIIFMQPLNAFVFVWDGIFMGAGAFRYLAVQMVLSSAVAAALLLLSVPLG-----WGLPGVWWAI 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2458.6666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2458.6666.1 >prot_H-paniculata_contig2458.6666.1 ID=prot_H-paniculata_contig2458.6666.1|Name=mRNA_H-paniculata_contig2458.6666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=685bp MRHPREKALSVRKATAVAVVSSLILAQASQQAASLVLPTRAHQTFESEEHback to top mRNA from alignment at H-paniculata_contig2458:1049..12354- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2458.6666.1 ID=mRNA_H-paniculata_contig2458.6666.1|Name=mRNA_H-paniculata_contig2458.6666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11306bp|location=Sequence derived from alignment at H-paniculata_contig2458:1049..12354- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2458:1049..12354- >mRNA_H-paniculata_contig2458.6666.1 ID=mRNA_H-paniculata_contig2458.6666.1|Name=mRNA_H-paniculata_contig2458.6666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4110bp|location=Sequence derived from alignment at H-paniculata_contig2458:1049..12354- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |