mRNA_H-paniculata_contig24564.6658.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: D8LBM3_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM3_ECTSI) HSP 1 Score: 115 bits (288), Expect = 3.080e-29 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTKR 219
GSVLQYSIF CTRVNSALTT+VVGC KNLLTT+VGM+G+G DY +E NC G+ +SM GSFLYSWAKV KR
Sbjct: 297 GSVLQYSIFRCTRVNSALTTSVVGCAKNLLTTVVGMLGMGDDYEFEALNCAGMVVSMGGSFLYSWAKVMKR 367
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A7S4D794_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D794_HETAK) HSP 1 Score: 81.6 bits (200), Expect = 8.290e-18 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTK 216
GSVL Y+IFVCT VNSALTTAVVGC+KN+ TT +GM L GDY + N +G+ IS+ GS +YS+ K T+
Sbjct: 102 GSVLNYAIFVCTSVNSALTTAVVGCLKNVATTFLGM--LLGDYIFAWVNFIGINISLFGSLVYSYGKFTE 169
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: UPI001E6754E4 (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E6754E4) HSP 1 Score: 83.6 bits (205), Expect = 1.740e-17 Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTKR 219
G +L YS+ +CT+ NSALTT ++GC+KN+ T +GM+ +GGDY + L N +GL IS+ GS +YSW TK+
Sbjct: 232 GFILMYSVMICTQFNSALTTTIIGCLKNIFITYLGMI-IGGDYVFSLYNFIGLNISIGGSIVYSWVTFTKK 301
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A4W3JZ47_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JZ47_CALMI) HSP 1 Score: 78.6 bits (192), Expect = 3.490e-17 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTKR 219
G +L YS +CT+ NSALTT +VGC+KN+L T +GMV LGGDY + N +GL IS+AGS +YS+ T++
Sbjct: 27 GFILMYSTLLCTQYNSALTTTIVGCIKNILVTYIGMV-LGGDYIFTWTNFIGLNISIAGSLVYSYITFTEQ 96
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A0S7F564_9TELE (S35D2 n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F564_9TELE) HSP 1 Score: 79.0 bits (193), Expect = 5.750e-17 Identity = 38/71 (53.52%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTKR 219
G VL YSI +CT++NSALTT+++GC+KN+L T +GMV GGDY + N +GL IS+AGS +YS+ T++
Sbjct: 75 GFVLMYSIMLCTQLNSALTTSIIGCIKNILVTYIGMV-FGGDYIFTWLNFLGLNISIAGSLVYSYITFTQQ 144
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A8J2WZY0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZY0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 7.310e-17 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTKR 219
G VLQY+IFVCT+ NSALTT VVG +KN+ TT VGM LGGDY Y L N G+ +S S +YSWA + R
Sbjct: 258 GPVLQYAIFVCTQHNSALTTTVVGALKNVATTYVGMF-LGGDYAYSLVNFAGITVSCVASLVYSWAVLLGR 327
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A444TVP4_ARMVU (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TVP4_ARMVU) HSP 1 Score: 79.3 bits (194), Expect = 8.730e-17 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSW 201
G +L YSI +CT+ NSALTT ++GC+KN+L T +G++ +GGDY Y + N VGL IS+ GS +YSW
Sbjct: 97 GFILMYSIMLCTQHNSALTTTIIGCLKNILVTYLGII-IGGDYVYSIYNFVGLNISILGSVVYSW 160
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A444U5R2_ACIRT (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444U5R2_ACIRT) HSP 1 Score: 80.9 bits (198), Expect = 1.040e-16 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTK 216
G VL YS FVCT+ NSALTT +VGC+KN+L T +GMV GGDY + N +GL IS+AGS +YS+ T+
Sbjct: 183 GFVLMYSTFVCTQYNSALTTTIVGCIKNILVTYIGMV-FGGDYIFSWTNFIGLNISIAGSLVYSYITFTE 251
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A0D2WIM4_CAPO3 (Solute carrier family 35 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIM4_CAPO3) HSP 1 Score: 82.0 bits (201), Expect = 1.200e-16 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAK 207
G +L YSIF+CT+ NS LTT VVGC+KN+LTT +GM LGGDY + + N VGL IS++GS YS+ K
Sbjct: 328 GLILNYSIFLCTKANSPLTTTVVGCLKNILTTYLGMF-LGGDYIFSMANFVGLNISVSGSVYYSYVK 393
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Match: A0A3Q2XFX1_HIPCM (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like n=5 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2XFX1_HIPCM) HSP 1 Score: 80.5 bits (197), Expect = 1.470e-16 Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 7 GSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKNCVGLAISMAGSFLYSWAKVTK 216
G +L YSI +CT+ NSALTT++VGC+KN++ T VGMV LGGDY + N +GL IS+AGS +YS+ TK
Sbjct: 184 GFILMYSIMLCTQHNSALTTSIVGCIKNIVVTYVGMV-LGGDYIFSWTNFIGLNISIAGSLVYSFITFTK 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24564.6658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24564.6658.1 >prot_H-paniculata_contig24564.6658.1 ID=prot_H-paniculata_contig24564.6658.1|Name=mRNA_H-paniculata_contig24564.6658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp MSGSVLQYSIFVCTRVNSALTTAVVGCMKNLLTTLVGMVGLGGDYHYELKback to top mRNA from alignment at H-paniculata_contig24564:954..1175+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24564.6658.1 ID=mRNA_H-paniculata_contig24564.6658.1|Name=mRNA_H-paniculata_contig24564.6658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=222bp|location=Sequence derived from alignment at H-paniculata_contig24564:954..1175+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24564:954..1175+ >mRNA_H-paniculata_contig24564.6658.1 ID=mRNA_H-paniculata_contig24564.6658.1|Name=mRNA_H-paniculata_contig24564.6658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig24564:954..1175+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |