mRNA_H-paniculata_contig2456.6656.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A6H5JRU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU7_9PHAE) HSP 1 Score: 242 bits (617), Expect = 8.640e-76 Identity = 120/187 (64.17%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 1 GLVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNFRKRYKIQYKTPQALVSAILKGEVNSNDSRPFCNQLAWLLSGEDIDYTSVRDIEEAKRIADGILATAERWRVTVLLTERMSESIVVL 561
GLV IKSFKTGSTTLATYIAQ VGH++ SYFLHP+ TGWF GEL R ++GQ FD+S+RHVTP T Y ++E LVPGA+FVTIMRRP +RFLSLFNFR K +YKTPQALV+ I G+V D+RPFCNQLAWL+SG D+D+T + D E+A+R+A ++ AER V VL+TERMSES+ VL
Sbjct: 92 GLVLIKSFKTGSTTLATYIAQ-----VGHQRRSYFLHPKATGWFGRGELESRRDEGQSFDISLRHVTPYTPYDVLEELVPGAAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGKVPQGDARPFCNQLAWLMSGRDVDFTKIADAEKARRVASEVIEEAERRGVVVLITERMSESVAVL 273
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A8J2WZM9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZM9_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.180e-34 Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNFRKRYKIQYK-TPQALVSAILKGEVNSNDSRPFCNQLAWLLSGEDIDYTSVRDIEEAKRIADGILATAERWRVTVLLTERMSESIVVL 561
+VF+K++KTGSTT++ ++AQ +G+ +G + LHP ++G FK GEL R ++G+RFDLS RH TP + LVP A + TIMR P+ RF+S F +R +++ ALV +I K + D+ FCN +AW+LSGE EE A I A + VL+ + MS S+ +L
Sbjct: 82 VVFVKTYKTGSTTVSEFLAQ-----IGYERGLHALHPSESGHFKAGELKRRADRGERFDLSFRHPTPTLDVLSLGRLVPNARWCTIMREPVSRFVSTMRFVRRLDERFRGNAAALVDSIQKKRLPDGDANTFCNNVAWVLSGEQRTLAYGVSREEQLAAAAAITARLDAHETLVLMQKDMSASLALL 263
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: F0Y4E6_AURAN (USP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4E6_AURAN) HSP 1 Score: 112 bits (279), Expect = 3.390e-25 Identity = 66/184 (35.87%), Postives = 102/184 (55.43%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNFRKRYKIQY-KTPQALVSAILKGEVNSNDSRPFCNQLAWLLSGEDIDYTSVRDIEEAKRIADGILATAERWRVTVLLTERMSESI 552
+VF+K++KTGSTT++ ++A VG+ G + LHP+ G F+ GEL R G+R+ LS RH TP + LVP A + TIMR P+ RF+S F KR +Y +P LV+AI + + ++ FCN +AW+L G+ ++A + A + RV VL+ + M+ S+
Sbjct: 3732 VVFVKTYKTGSTTVSEFLAA-----VGYDLGLHALHPRDGGNFRAGELARRGAAGERYHLSYRHPTPRLDVASLGALVPDAYWCTIMREPVSRFVSTMLFVKRVGERYGNSPPKLVAAIQARKHDDGEANTFCNNVAWVLLGDARSLAYGISDDDAAAATARVRADLDGRRVDVLMQKDMAASL 3910
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A7S2STP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STP4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 9.470e-19 Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPL 276
LVFIK++K+GSTT+A ++ V ++K LHP GWF++GEL+ R G+R+D+S RH+TP+ Y + +L+P A +V+I+R P+
Sbjct: 52 LVFIKTYKSGSTTVAKFLNA-----VAYQKELTMLHPLAQGWFQNGELVRRGKAGERYDMSFRHITPHVDYPALGVLLPNAHYVSILREPV 137
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A7S2STS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS6_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.910e-13 Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 262 MRRPLDRFLSLFNFRKRYKIQYKTPQALVSAIL-KGEVNSNDSRPFCNQLAWLLSGEDIDYTS--VRDIEEAKRIADGILATAERWRVTVLLTERMSESIVVL 561
+R P+ RF+SLFNF + + +++T + V+A+ + V ND+ FCN +AW+LSGE I+ T V +EEA I + E T+LL++RM+ES+V+L
Sbjct: 1 LREPVSRFVSLFNFVRTIQTKFRTAENFVAAVKSRKSVKVNDANAFCNNMAWVLSGEPIEKTFAYVDSLEEAATIESQLFGELEARGFTMLLSDRMAESMVLL 103
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: UPI0001CBBAA8 (uncharacterized protein LOC100373995 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBAA8) HSP 1 Score: 60.1 bits (144), Expect = 2.910e-7 Identity = 49/192 (25.52%), Postives = 97/192 (50.52%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFR---VGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFN-FRKRYKIQYKTPQALVSAILKGEVNSNDSRPFCNQLAWLLSGE--DIDYTSVRDIEEAKRIADGILATAERWRVTVLLTERMSESIVVL 561
L++IK+ KTGSTTLA+ I + G+ R + KG++ +T ++ +++G FD+ H N ++ ++P A+++TI+R P+ +F S F+ FR I+ P + + + D P + +G+ D+ T+ + + E+ I + + + +R +L+TE ES+++L
Sbjct: 89 LIYIKTHKTGSTTLASIIERYGYTRNLTMAIPKGNHIF--SKTSQPFQRSMVAEIDEGTHFDMLTNHARYNRPE--LDSVIPNATYITILRHPVKQFESSFSYFRWNKYIRSNDP---IMELFRNSTKYIDKLPM---KGLVQNGQLFDLGLTAEQTLNES--IVEEKILSLDREMDLILITEYFDESLLIL 268
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A7M7MY62_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7MY62_STRPU) HSP 1 Score: 59.3 bits (142), Expect = 4.780e-7 Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFR---VGHRKGSYFLHPQQTGWFKDGELLERMNKG-QRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNF 303
+V++K+ KTGSTT A+ + + G+ R KGS+ + +Q FK L + N+ Q FD+ + HV N + M++ VPGA +VTI+R P+ + S F +
Sbjct: 133 IVYVKTHKTGSTTTASILERFGYLRNLSFAMGKGSHIISNEQL--FKRSMLYQIPNRTRQDFDMLVNHVRYNRNE--MDVAVPGAKYVTIIRDPVTQLESAFGY 232
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: A0A2G8JZ22_STIJA (Putative galactosylceramide sulfotransferase isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JZ22_STIJA) HSP 1 Score: 55.1 bits (131), Expect = 1.180e-5 Identity = 46/190 (24.21%), Postives = 91/190 (47.89%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFR-VGHRKGSYFLHPQQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNFRKRYK-IQYKTPQALVSAILKGEVNSNDSRPFCNQLAWLLS--GEDIDYTSVRDIEEAKRIADGILATAERWRVTVLLTERMSESIVVL 561
+VF+K+ KT STT A+ + G++R + G + + + + L +G+ FD+ H N M+L+VP A++VTI+RRP D+ S F + + Y+ + + ++ + ++ + W LS G+ D R ++E K + + ++ V+++E ES+V++
Sbjct: 17 IVFLKTHKTASTTSASLFQRYGYYRNLTFAVGRNHILSFSSKFSRRNVLNFPGMRGKAFDMLANHARYNRGE--MDLVVPNATYVTIIRRPEDQLESAFGYFEMYRGMNLSKDDHPLRTFMENPMKYYENHKYH---MWQLSRNGQLFDLGLDRQMQENKSFIEQFIDQIDKDFDLVMISEYYDESLVLM 201
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: UPI0001CBC351 (galactosylceramide sulfotransferase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC351) HSP 1 Score: 54.7 bits (130), Expect = 1.560e-5 Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHP-QQTGWFKDGELLERMNKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNF 303
LV+IK+ KTGSTTLA+ + + G+ R H +TG F + ++ +++ FD+ H N ++ L+P A+++TI+R PL +F S+F F
Sbjct: 22 LVYIKTHKTGSTTLASILERFGYTRNLTMAVPEIRHGFPRTGLF-NRRMVWKIDNISSFDMLTNHARYNRPE--LDALIPNATYITILRHPLAQFESMFGF 119
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Match: UPI001BB2403A (galactosylceramide sulfotransferase-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2403A) HSP 1 Score: 54.3 bits (129), Expect = 2.380e-5 Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 4 LVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLERM-------NKGQRFDLSIRHVTPNTSYRLMELLVPGASFVTIMRRPLDRFLSLFNFRKRYK-IQYKTPQALVSAIL 360
+VFIK+ KTGSTT A+ + R G+R+ F + +F EL + K + +D + H N + M++ VP A +++I+R P+++ S F + + K + +T Q VS I+
Sbjct: 73 VVFIKTHKTGSTTTASLLE-----RFGYRRNLSFAMDKSLHYFSRMELFDHTMVFKVPRRKRKDYDFLVNHARLNK--KEMDIAVPNAKYISIIRNPVNQLESAFGYFEMAKQLGIRTKQPFVSFIM 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2456.6656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2456.6656.1 >prot_H-paniculata_contig2456.6656.1 ID=prot_H-paniculata_contig2456.6656.1|Name=mRNA_H-paniculata_contig2456.6656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp GLVFIKSFKTGSTTLATYIAQAGHFRVGHRKGSYFLHPQQTGWFKDGELLback to top mRNA from alignment at H-paniculata_contig2456:318..2202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2456.6656.1 ID=mRNA_H-paniculata_contig2456.6656.1|Name=mRNA_H-paniculata_contig2456.6656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1885bp|location=Sequence derived from alignment at H-paniculata_contig2456:318..2202- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2456:318..2202- >mRNA_H-paniculata_contig2456.6656.1 ID=mRNA_H-paniculata_contig2456.6656.1|Name=mRNA_H-paniculata_contig2456.6656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig2456:318..2202- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |