mRNA_H-paniculata_contig24267.6573.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24267.6573.1
Unique NamemRNA_H-paniculata_contig24267.6573.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: H3H7T3_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7T3_PHYRM)

HSP 1 Score: 137 bits (344), Expect = 6.650e-34
Identity = 87/227 (38.33%), Postives = 123/227 (54.19%), Query Frame = 1
Query:    1 PPGRKAICTKWIFKQKLKENSSVARYKARLVAQGFSLVEGGDFFETSASVARMSTTCKRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQ------YTEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR--------EGILLALKYVQTGGQLADILTKELSRVKFQR 639
            P  +K I  KW+F+ K   +  + ++KARLVA+GF+   G D+ ET A                   PDLG  F   +    L G+ DANWA D++ R+STTG VF LN   I+W S++Q       TEAEY+A   A +EAV+LR+LL  +G  C G+TT+F+DN+  I L+K    H RT HI ++        E  ++ L+Y  T    AD  TK L+R K ++
Sbjct:  361 PSDKKTIGCKWVFRIKRDPSGKIIKFKARLVAKGFTQRPGVDYTETFA-------------------PDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMSADRFTKALARPKHRQ 567          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A5D3DJY4_CUCME (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DJY4_CUCME)

HSP 1 Score: 135 bits (340), Expect = 9.660e-34
Identity = 98/251 (39.04%), Postives = 124/251 (49.40%), Query Frame = 1
Query:    1 PPGRKAICTKWIFKQKLKENSSVARYKARLVAQGFSLVEGGDFFETSASVARMST-------------------TCKRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQ------YTEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR----EGILLA----LKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            P G+KA   KW+FK K  E   V RYKARLVA+G+S  +G D+ E  A VA + T                     KR  RY+    D G  F   S    LEG+ D++WA D  DRKST+G  F + +    W S+KQ        EAEY+AA      AV+LR LL ++G     ST +  DNKS I L+K    H R+ HI  R     G +L     ++YV+T  Q ADI TK L    F  LR LL
Sbjct:  233 PNGKKAAGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFALVACLETISVGFVSRFMESPTTTHLKVAKRILRYLKGTLDYGL-FYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYAFFIGNIAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQDDSTVIHVDNKSTIALAKNPVFHDRSKHIDTRFHFIRGCILRKEVQVEYVKTEDQTADIFTKPLKVNMFNNLRTLL 482          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 125 bits (313), Expect = 1.230e-31
Identity = 78/174 (44.83%), Postives = 102/174 (58.62%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGT--TFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQYT------EAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIREGIL--------LALKYVQTGGQLADILTKELSRVKFQRLR 645
            KR  RY+    DLG   TF D+     + GF D+++A DV+ RKSTTG VF + +G I WCSR+Q T      EAEY+AA EA KEA++LR LL  I      +  L+ DN+SAI L K    H RT HI +R   +        + ++YV++  QLADILTK L  VKF +LR
Sbjct:   78 KRIMRYLKHTKDLGIRYTFSDEP----VHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A0J7KRG1_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KRG1_LASNI)

HSP 1 Score: 129 bits (325), Expect = 6.610e-31
Identity = 77/172 (44.77%), Postives = 100/172 (58.14%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR--------EGILLALKYVQTGGQLADILTKELSRVKFQRLR 645
            KR F Y+    DLG  +    +   L GF DA++A D+E R+STTG +F L SG + W SR+Q       TEAEYIAA  A KEAV+LR LL  +G+ C   T L+ DN+SAI ++K    H RT HI +R        E   + + YV +  Q ADILTK LS+  F+RLR
Sbjct: 1433 KRIFAYLVGTADLGIEYRSSGSESKLVGFSDADYAGDLETRRSTTGYLFSLASGPVTWSSRRQKIVTLSTTEAEYIAASSAAKEAVWLRNLLDEVGYRCDSPTVLYVDNQSAIKIAKNPEFHERTKHIDVRYHHIRKMVENAAIQVLYVPSEMQKADILTKALSKESFRRLR 1604          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 127 bits (320), Expect = 1.090e-30
Identity = 77/179 (43.02%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTF----GDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR-----EGIL---LALKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            KR  RYI    + G  F     D  N   L G+ DANWA DV+ R+ST+G VFK+ + T++WCS+KQ       TEAEY+A  +A +EA+++R LL  IG      TT++EDN+ AI +SK    H RT HI +R     E +L   + + Y  T   LADI+TK L++  FQRLR++L
Sbjct:  352 KRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 128 bits (321), Expect = 2.220e-30
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIG-----IREGI---LLALKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            KR  RY+      G TF    N   L G+ DA+W  DVE R+ST+G VF++ + TI+WCS++Q       TEAEYIA   A +EAV+LR LL  IG      +T+FEDN+ AI LSK    H RT HI      IRE +   ++ +KY +T   LAD++TK L +V F+R R+++
Sbjct: 1154 KRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSFERFRDMM 1328          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 127 bits (318), Expect = 5.550e-30
Identity = 77/179 (43.02%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTF----GDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR-----EGIL---LALKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            KR  RYI    + G  F     D  N   L G+ DANWA DV+ R+ST+G VFK+ + T++WCS+KQ       TEAEY+A  +A +EA+++R LL  IG      TT++EDN+ AI +SK    H RT HI +R     E +L   + + Y  T   LADI+TK L++  FQRLR++L
Sbjct: 1097 KRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 1275          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 126 bits (316), Expect = 9.640e-30
Identity = 77/179 (43.02%), Postives = 105/179 (58.66%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTF----GDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR-----EGIL---LALKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            KR  RYI    + G  F     D  N   L G+ DANWA DV+ R+ST+G VFK+ + T++WCS+KQ       TEAEY+A  +A +EA+++R LL  IG      TT++EDN+ AI  SK    H RT HI +R     E +L   + + Y  T   LADI+TK L++  FQRLR++L
Sbjct:  700 KRLLRYIKGTLNFGLKFTTSENDDENGDKLYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIESSKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 878          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A1M2V968_TRAPU (Copia protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V968_TRAPU)

HSP 1 Score: 119 bits (297), Expect = 3.720e-29
Identity = 74/183 (40.44%), Postives = 96/183 (52.46%), Query Frame = 1
Query:  163 TTCKRYFRYISTVPDLGTTFGDKSNCHG--------LEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQY------TEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGIR--------EGILLALKYVQTGGQLADILTKELSRVKFQRLR 645
            T  KR FRY+    D G T+G K   H         LEG+ DA+W  +  DRKS +G  F + SG I W S+KQ       TEAEY+A   A + A+++R LL  + F    +T L  DN+SAI LSK    H R+ HI IR        E   +AL YV T   +AD+ TK L+R +F  LR
Sbjct:   62 TAVKRVFRYLKGTLDYGMTYGRKGETHARAYYRNLRLEGYSDADWGANPVDRKSISGYAFLIGSGVIAWSSKKQAVVALSSTEAEYMAISYAARHAIWMRTLLAELTFAQEQATKLNADNQSAIALSKDSVHHARSKHIDIRHHFIRECIESDTIALAYVPTDDNVADLFTKALARERFHMLR 244          
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 119 bits (297), Expect = 9.480e-29
Identity = 71/175 (40.57%), Postives = 99/175 (56.57%), Query Frame = 1
Query:  172 KRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKSTTGCVFKLNSGTINWCSRKQ------YTEAEYIAAGEAGKEAVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKAYGAHCRTNHIGI-----REGI---LLALKYVQTGGQLADILTKELSRVKFQRLRNLL 654
            KR  RYI    + G  F  KS    L G+ DA+WA D++ R+ST+G VF++N  T++WCS++Q       TEAEY+A   A +E V+LR LL  IG      + + EDN+ AI LSK    H RT HI +     RE +    + + Y  T   LAD++TK L R  FQ+ R++L
Sbjct:  127 KRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24267.6573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3H7T3_PHYRM6.650e-3438.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A5D3DJY4_CUCME9.660e-3439.04Retrovirus-related pol polyprotein from transposon... [more]
A0A1Y1N3K4_PHOPY1.230e-3144.83Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A0J7KRG1_LASNI6.610e-3144.77Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A7D9JFU5_PARCT1.090e-3043.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HNY1_PARCT2.220e-3043.43Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9DPP1_PARCT5.550e-3043.02Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7H8C9_PARCT9.640e-3043.02Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1M2V968_TRAPU3.720e-2940.44Copia protein n=1 Tax=Trametes pubescens TaxID=154... [more]
A0A7D9D5L2_PARCT9.480e-2940.57Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24267contigH-paniculata_contig24267:1017..2473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.2
Seed ortholog evalue1.2e-30
Seed eggNOG ortholog164328.Phyra86815
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHNV@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons4
Model size660
Cds size660
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24267.6573.1prot_H-paniculata_contig24267.6573.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24267 1017..2473 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929699.694189-CDS-H-paniculata_contig24267:1016..11361622929699.694189-CDS-H-paniculata_contig24267:1016..1136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1017..1136 -
1691480972.233168-CDS-H-paniculata_contig24267:1016..11361691480972.233168-CDS-H-paniculata_contig24267:1016..1136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1017..1136 -
1622929699.7102392-CDS-H-paniculata_contig24267:1163..13411622929699.7102392-CDS-H-paniculata_contig24267:1163..1341Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1164..1341 -
1691480972.2428968-CDS-H-paniculata_contig24267:1163..13411691480972.2428968-CDS-H-paniculata_contig24267:1163..1341Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1164..1341 -
1622929699.7217784-CDS-H-paniculata_contig24267:1359..15571622929699.7217784-CDS-H-paniculata_contig24267:1359..1557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1360..1557 -
1691480972.2520454-CDS-H-paniculata_contig24267:1359..15571691480972.2520454-CDS-H-paniculata_contig24267:1359..1557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 1360..1557 -
1622929699.7380219-CDS-H-paniculata_contig24267:2309..24731622929699.7380219-CDS-H-paniculata_contig24267:2309..2473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 2310..2473 -
1691480972.2671132-CDS-H-paniculata_contig24267:2309..24731691480972.2671132-CDS-H-paniculata_contig24267:2309..2473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24267 2310..2473 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24267.6573.1

>prot_H-paniculata_contig24267.6573.1 ID=prot_H-paniculata_contig24267.6573.1|Name=mRNA_H-paniculata_contig24267.6573.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
PPGRKAICTKWIFKQKLKENSSVARYKARLVAQGFSLVEGGDFFETSASV
ARMSTTCKRYFRYISTVPDLGTTFGDKSNCHGLEGFVDANWAEDVEDRKS
TTGCVFKLNSGTINWCSRKQYTEAEYIAAGEAGKEAVYLRELLGSIGFGC
RGSTTLFEDNKSAINLSKAYGAHCRTNHIGIREGILLALKYVQTGGQLAD
ILTKELSRVKFQRLRNLLM*
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mRNA from alignment at H-paniculata_contig24267:1017..2473-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24267.6573.1 ID=mRNA_H-paniculata_contig24267.6573.1|Name=mRNA_H-paniculata_contig24267.6573.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1457bp|location=Sequence derived from alignment at H-paniculata_contig24267:1017..2473- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCCAGGGCGGAAGGCGATTTGTACGAAATGGATTTTCAAGCAGAAACT GAAGGAGAACAGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAG GCTTTTCACTGGTGGAGGGTGGAGATTTCTTTGAAACCAGTGCCTCCGTA GCTCGCATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGTCGAACATGA TTTCGCTCTAGAAGGCATCGACGTAGATGCGGCGTATATGAACGCCCCCG TATCAGAAGAGCTGTTTATTAAGCTACCCCACGAGTTTCCCCCTTTTCCC TAAGACATGCCGTTTGTGCGCCGCCTGCGTAAAAGCCGGAACTGGAATAA CACTCTTGACGATTTTCTTGTTAGGATAGGACTCCGATGTTCCATTACTG ACCCATACTTGTACTTCTCTCGCGACGAAGGGGGAGATATACACATTCTC GTGGCTGTTTATGTTGACGACCTGGTCATCGCTGGACGTCGTGAGAAAGT AGACGAATTTAAGCACGACATAAGTCGGCGTTTTGGGATGAAATATTCGG GCTACCTCTCGCGCGTGTTGGGAATAGAAGTACCATATTAATATCCCAAG GTGGCTACATCCGCAACGTACTGAAAATATACGGTTTTGACGAGTGTCGA GGCGTGCCCATCCCTGTAGAGGGAAAAGTGAAGATTTTGGCACCCGAGTC GGCTGACAAACCCCCAGAACCGAAGTCACTTGTGGCTGTACTGTCGGGCA TAGGCGCAGGAGTACACGAAAACAGTAGCAGAAGTGCTAATTCAGCTGAA TACAGAGGCATGGTAGGATCACTTATGTATGCCTCAACAGAAACTCGACC TGATATAGCATATGCGGTACATCAAGCAGCACGTCGTGTAGAGGACCCAT CTCGATAAGACTTCAGTACATGCAAGCGCTATTTTCGTTATATCAGTACC GTGCCTGACCTCGGCACTACGTTCGGCGATAAGAGCAATTGTCACGGTCT TGAAGGATTCGTTGATGCCAATTGGGCGGAAGATGTCGAGGATCGAAAGT CCACAACAGGATGTGTATTCAAGCTAAACAGTGGTACGATAAATTGGTGC TCTAGGAAGCAATAGTTAGTTACGTAATCCAGTACAGAGGCAGAATACAT TGCTGCAGGAGAAGCGGGAAAGGAGGCGGTATACCTTAGGGAGTTACTAG GATCGATAGGTTTCGGGTGCAGGGGGAGCACGACATTGTTTGAGGACAAT AAATCAGCTATCAATCTCAGTAAGGCATATGGTGCACACTGCAGGACAAA TCACATCGGAGTGCGCTGGCACGGAATTTGAGAGTAGATTCGGGAAGGAA TATTATTGGCGTTGAAATACGTGCAGACTGGCGGCCAACTCGCTGACATT TTAACGAAAGAGCTGAGCAGAGTGAAGTTTCAGAGACTTAGAAATTTACT GATGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig24267:1017..2473-

>mRNA_H-paniculata_contig24267.6573.1 ID=mRNA_H-paniculata_contig24267.6573.1|Name=mRNA_H-paniculata_contig24267.6573.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig24267:1017..2473- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCCAGGGCGGAAGGCGATTTGTACGAAATGGATTTTCAAGCAGAAACT
GAAGGAGAACAGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAG
GCTTTTCACTGGTGGAGGGTGGAGATTTCTTTGAAACCAGTGCCTCCGTA
GCTCGCATGTCGACCCGCCAGGGCGGAAGGCGATTTGTACGAAATGGATT
TTCAAGCAGAAACTGAAGGAGAACAGCAGCGTGGCACGCTACAAAGCGCG
ACTGGTGGCTCAAGGCTTTTCACTGGTGGAGGGTGGAGATTTCTTTGAAA
CCAGTGCCTCCGTAGCTCGCATGTCGACTACATGCAAGCGCTATTTTCGT
TATATCAGTACCGTGCCTGACCTCGGCACTACGTTCGGCGATAAGAGCAA
TTGTCACGGTCTTGAAGGATTCGTTGATGCCAATTGGGCGGAAGATGTCG
AGGATCGAAAGTCCACAACAGGATGTGTATTCAAGCTAAACAGTGGTACG
ATAAATTGGTGCTCTAGGAAGCAATATACATGCAAGCGCTATTTTCGTTA
TATCAGTACCGTGCCTGACCTCGGCACTACGTTCGGCGATAAGAGCAATT
GTCACGGTCTTGAAGGATTCGTTGATGCCAATTGGGCGGAAGATGTCGAG
GATCGAAAGTCCACAACAGGATGTGTATTCAAGCTAAACAGTGGTACGAT
AAATTGGTGCTCTAGGAAGCAATATACAGAGGCAGAATACATTGCTGCAG
GAGAAGCGGGAAAGGAGGCGGTATACCTTAGGGAGTTACTAGGATCGATA
GGTTTCGGGTGCAGGGGGAGCACGACATTGTTTGAGGACAATAAATCAGC
TATCAATCTCAGTAAGGCATATGGTGCACACTGCAGGACAAATCACATCG
GATACAGAGGCAGAATACATTGCTGCAGGAGAAGCGGGAAAGGAGGCGGT
ATACCTTAGGGAGTTACTAGGATCGATAGGTTTCGGGTGCAGGGGGAGCA
CGACATTGTTTGAGGACAATAAATCAGCTATCAATCTCAGTAAGGCATAT
GGTGCACACTGCAGGACAAATCACATCGGAATTCGGGAAGGAATATTATT
GGCGTTGAAATACGTGCAGACTGGCGGCCAACTCGCTGACATTTTAACGA
AAGAGCTGAGCAGAGTGAAGTTTCAGAGACTTAGAAATTTACTGATGTGA
ATTCGGGAAGGAATATTATTGGCGTTGAAATACGTGCAGACTGGCGGCCA
ACTCGCTGACATTTTAACGAAAGAGCTGAGCAGAGTGAAGTTTCAGAGAC
TTAGAAATTTACTGATGTGA
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