mRNA_H-paniculata_contig24155.6539.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: D8LK70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK70_ECTSI) HSP 1 Score: 232 bits (591), Expect = 5.000e-74 Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 1
Query: 466 MSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
MSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEK+RKDGGDSAWIERTR+TEAELDWAKEMADRLDRVNQGL RENLRLKSQFKSQEDDRKFLI+QLVA+K
Sbjct: 1 MSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKTRKDGGDSAWIERTRRTEAELDWAKEMADRLDRVNQGLSRENLRLKSQFKSQEDDRKFLIKQLVAIK 128
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A482S3B0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3B0_9ARCH) HSP 1 Score: 204 bits (519), Expect = 2.660e-61 Identity = 113/165 (68.48%), Postives = 139/165 (84.24%), Query Frame = 1
Query: 355 LQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
L+ DL RRQESYI RERA+ MRI+ELEEE+++ + K WM+ + + L+ MH QIL NVE+VQDR+++ILQEQE+DLLRAFRARLFDVQTELEKEK +KD G +AWIER+RQ EAE++WAKE+ADRL+RVNQ L +EN RLKSQF SQE+DR FLI+QLVAVK
Sbjct: 63 LEKDLERRQESYITRERAYKMRIDELEEELAAQRETKTGWMKSDLKISKLRAMHGQILGNVELVQDRTARILQEQERDLLRAFRARLFDVQTELEKEKGKKDDGAAAWIERSRQLEAEVEWAKEVADRLERVNQTLLQENNRLKSQFTSQEEDRNFLIKQLVAVK 227
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A836C814_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C814_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.370e-52 Identity = 93/126 (73.81%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 472 WMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
WM+ + +M++LK+M + ILHNVE+VQ+R++ I+QEQE+DLLRAFRARLFDVQTELEKEK +KD G S WIERTR+ EAEL+WAKE ADRLDRVNQGLGREN RLK FKSQE+DR FLI+QLVAVK
Sbjct: 1 WMREDKNMQNLKSMQKNILHNVELVQERTATIMQEQERDLLRAFRARLFDVQTELEKEKQKKDDGASVWIERTRRIEAELEWAKETADRLDRVNQGLGRENARLKGHFKSQEEDRAFLIKQLVAVK 126
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A024USD1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USD1_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.650e-52 Identity = 105/181 (58.01%), Postives = 140/181 (77.35%), Query Frame = 1
Query: 307 SQDEEHLQVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
++DEE+L+ + ID L+ DL+RRQESY+RRER + +RI+ELE VS ++ K M +M SL+ +H+ IL ++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLVAVK
Sbjct: 47 AEDEEYLKSV---IDKLEQDLARRQESYVRRERQYQVRIDELERMVSDSRAKKAPSMSHEDTMASLRGLHKSILSSISQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVAVK 224
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A6V1XND5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XND5_HETAK) HSP 1 Score: 179 bits (454), Expect = 7.400e-52 Identity = 100/178 (56.18%), Postives = 141/178 (79.21%), Query Frame = 1
Query: 316 EEHLQVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
E+HL ++I+ L+ DL RRQE+Y+RRERA+ +R+EELE+E++ +K+G+ WM+ + M +LK +H++IL NV+ VQ+R++KILQEQE+DL R+F+ARLFDVQTELEKEK +KD G +A+IE+ +Q E E+D +EMA RVN L REN RLK+QF++QE+DR FLI+QLV VK
Sbjct: 58 EDHLN---KQIEQLKNDLKRRQETYVRRERAYTVRLEELEQELAEIKAGRTGWMKDDRHMAALKALHREILRNVDQVQERTAKILQEQERDLSRSFKARLFDVQTELEKEKGKKDDGAAAYIEKAKQLEEEVDRMREMAXXXXRVNGALVRENGRLKAQFQTQEEDRDFLIKQLVQVK 232
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: W4HAY6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAY6_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.570e-52 Identity = 106/181 (58.56%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 307 SQDEEHLQVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
++DEE+ MK ID L+ DL+RRQESY+RRER + +RIEELE VS ++ K S + +M SL+ +H+ IL ++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLV VK
Sbjct: 48 TEDEEY---MKSVIDKLEQDLARRQESYVRRERQYQVRIEELERMVSDSRAKKASSVSHEDTMTSLRGLHKSILGSISQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVTVK 225
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A6G0XQ07_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ07_9STRA) HSP 1 Score: 183 bits (464), Expect = 4.170e-51 Identity = 100/174 (57.47%), Postives = 137/174 (78.74%), Query Frame = 1
Query: 328 QVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
+ MK I+ L+ DL+RRQESY+RRER + +RIEELE +S ++ K S + + +M SL+++H+ I+ ++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLV+VK
Sbjct: 50 EYMKSVIEKLEQDLARRQESYVRRERQYQVRIEELERMLSDSRAKKSSSVSHDDTMNSLRSLHKNIMVSISQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVSVK 223
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A1W0A6J4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6J4_9STRA) HSP 1 Score: 182 bits (463), Expect = 4.820e-51 Identity = 101/179 (56.42%), Postives = 139/179 (77.65%), Query Frame = 1
Query: 313 DEEHLQVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
D E + MK I+ L+ DL+RRQESY+RRER + +RIEELE+ ++ K+ K + + +M SL+ +H+ I++++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLV+VK
Sbjct: 39 DAEDEEYMKSVIEKLEQDLARRQESYVRRERQYQVRIEELEKLLAESKAKKSTNASHDETMSSLRQVHKSIMNSIAQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVSVK 217
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A1V9ZRG7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRG7_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.100e-51 Identity = 100/172 (58.14%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 334 MKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
M+ ++ L+ DL+RRQESY+RRER + +RIEELE+ +S K+ K S + +M SL+ +H+ IL ++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLV+VK
Sbjct: 52 MRSVVEKLEQDLARRQESYVRRERQYQVRIEELEKLLSEAKTKKSSNVSHEDTMSSLRQVHKNILSSIAQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVSVK 223
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Match: A0A067CK96_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CK96_SAPPC) HSP 1 Score: 181 bits (460), Expect = 1.220e-50 Identity = 101/183 (55.19%), Postives = 139/183 (75.96%), Query Frame = 1
Query: 301 NSSQDEEHLQVMKQKIDTLQADLSRRQESYIRRERAFNMRIEELEEEVSSLKSGKMSWMQGNHSMESLKNMHQQILHNVEMVQDRSSKILQEQEKDLLRAFRARLFDVQTELEKEKSRKDGGDSAWIERTRQTEAELDWAKEMADRLDRVNQGLGRENLRLKSQFKSQEDDRKFLIRQLVAVK 849
N+ D + M+ ++ L+ DL+RRQESY+RRER + +RIEELE+ ++ K+ K+S +M SL+ +H+ IL ++ VQ+R+ KILQEQEKDLLRAFRARL+ VQ ELE EK++ D G SAWI++++Q E E++W KEMADRLDR+NQ L REN RLK+QF QE+DR+FL+RQLV+VK
Sbjct: 37 NAHLDPDDEDYMRSVVEKLEQDLARRQESYVRRERQYQVRIEELEKLLTEAKAKKVSSASHEDTMSSLRQVHKNILGSIAQVQERTGKILQEQEKDLLRAFRARLYSVQEELETEKNKTDDGASAWIDKSKQLETEVEWTKEMADRLDRLNQSLTRENQRLKTQFSMQENDREFLVRQLVSVK 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24155.6539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24155.6539.1 >prot_H-paniculata_contig24155.6539.1 ID=prot_H-paniculata_contig24155.6539.1|Name=mRNA_H-paniculata_contig24155.6539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp MPALRLAQHGAPGRLVGQKVGGSGDGAHGKHHHNSSQDEEHLQVMKQKIDback to top mRNA from alignment at H-paniculata_contig24155:703..3746+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24155.6539.1 ID=mRNA_H-paniculata_contig24155.6539.1|Name=mRNA_H-paniculata_contig24155.6539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3044bp|location=Sequence derived from alignment at H-paniculata_contig24155:703..3746+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24155:703..3746+ >mRNA_H-paniculata_contig24155.6539.1 ID=mRNA_H-paniculata_contig24155.6539.1|Name=mRNA_H-paniculata_contig24155.6539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig24155:703..3746+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |