mRNA_H-paniculata_contig24038.6506.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24038.6506.1
Unique NamemRNA_H-paniculata_contig24038.6506.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 3.750e-132
Identity = 226/402 (56.22%), Postives = 289/402 (71.89%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVCDK---DVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAIFLV 1191
            C+VCA+ YAPG  Y C  CS  S    VG+                 DLVRV  G  ++ ++  R L+ +   F A +V  FPLTT+KIVVV WQI+TQF  IAG VYP+ Y+ FL+ L+ +NLD+GF LSYSC+V TDF+DRLL ATIGP+VVLA+L  T+ V RKR I SE A+ A+++KHLSAALFV+FFIY SVS T+FQ FVCD     V YLRADYSL C T  + A+  YA +MVCVYPIGIPA  AW L  NR DL+K DR+ +A+L+P  +LW AY+PSR+YYE++E+VRRI LTGVAVF+LP S AQ+A+VLLLA+VFLFISESL+PF   +D  +YRWGNG++LAS+YVALL +   SEE S+T +AF + LI A++ M +T++VQ+  LV
Sbjct:  628 CSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDG--DDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLV 1027          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 8.990e-105
Identity = 198/407 (48.65%), Postives = 260/407 (63.88%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGFL-SYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVC---DKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREA--------MAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAI 1182
            CAVC E YA G  + C  C   + R  +G +V +  V ++G+   + DLVRV     E +        ++    R  +VK  PLT+IKIVVV WQIVTQF+ +   VYPD+YE FL+ L+++N D+GFL S SCIV  +FY RL F T+GPLVV   L +TY ++R R   S   M A + KHLS ALF+ F +Y SVS  IFQ FVC   D  V YLRADYSL C T  H A M YA LM+ VYP+GIP   +WWL  NR DL K             + HL+P R+LW++Y+P R+Y+EVLE  RRI LTG+A F+LPDS AQ+AI ++LA +F+ +S+ L+PF +  D  +YR G  II  SMY+ALL + +AS+EDSQ+  AF+  LIAAH+ MV+ VLVQA+
Sbjct:  657 CAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRV---VDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAV 1060          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 5.350e-99
Identity = 189/387 (48.84%), Postives = 248/387 (64.08%), Query Frame = 1
Query:   64 ASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRA-GRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVC---DKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDR--------EAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAI 1182
            A F  E G+ +  +LVV  GV   + +LVRV        V A G+ L       R  +    PLT+IKIV+V WQIVTQF+ +   VYPDVYE+FLS L+++N + GF LS SC+V T+FY RLLFATIGPLVVL  L  TY V+R R   S   +   +HKHLS ALF++F +Y SVS  IFQ FVC   D  V YLRADYSL C T TH A  VYA LM+ VYP GIPA    WL  NR DL K D         +++ +L+P R+LWA Y+P R+Y+EV+E  RRI LTG+AVFI P S AQ+A+ ++ A  F+ IS+ L+PF + +D  +YR G  +I  SM++ LL + +AS+EDSQ+   F+  LI+AH+ MV+ + VQA+
Sbjct:    2 ALFSNETGIAIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNS----LRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAV 384          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 5.380e-98
Identity = 192/401 (47.88%), Postives = 253/401 (63.09%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRAGRFLERKWYY----FRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVCDK---DVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQ 1176
            CAVCA  Y+PG    C+ C   S +  +     + L+ +  V   V  LV V      +Q        + W       +A + +  PLT +KIVVVVWQIVTQ++D+AG  YP  Y+ FLS + ++NLD+GF LS++C+  T+FYDRLL ATIGP++VL +L  TY VAR+R    E AM  ++ +HLS  LFV+F IY +VS TIF+ FVCD       YLRADYSL C T  H AY VYA L V VYP+GIP    WWL  NR +LK+ DRE  A L P  +LW  Y+PS +YYEV+E  RRI LTG AVFI PDS AQ+AIVLLLA VF+ +SE L+PF   V+  +YR G+ ++ ASMY+ALL + + S+E  Q+   FS  ++ AH+ M + V+VQ
Sbjct:  611 CAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQ 1011          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.860e-97
Identity = 192/398 (48.24%), Postives = 256/398 (64.32%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRV-EHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVCDK---DVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQ 1176
            CAVC+  Y+PG    C+ C   S +  +     +  + +  V   V  LV V E G  ++Q   G    R    ++A + +  PLT +KIVVVVWQIVTQ++D+AG  YP  Y+ FLS + ++NLD+GF LS++C+  T+FYDRLL ATIGP++VL +L  TY VAR+R    E AM  ++ +HLS  LFV+F IY +VS TIF+ FVCD       YLRADYSL C T  H AY VYA L V VYP+GIP    WWL  NR +LK+ DRE+ A L P  +LW  Y+PS +YYEV+E  RRI LTG AVFI PDS AQ+AIVLLLA VF+ +SE L+PF   V+  +YR G+ ++ ASMY+ALL + + S+E  Q+   FS  ++ AH+ M + V+ Q
Sbjct:  635 CAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKG--WRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQ 1030          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 4.320e-97
Identity = 191/397 (48.11%), Postives = 258/397 (64.99%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVCDK---DVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQ 1176
            CAVC   ++PG F+ C+ C   S RR   +   V ++V+L V      LV V    T    +A    ++K   ++A + K+ PLT IKIVVVVWQIVTQ++D+AG  YP  Y+ FLS + ++NLD+GF LS +C+  TDFYDRLL  TI P VVL +L  TY           +AM  ++H+HLS ALF++F IY +VS TIF+ FVCD       YLR+DYSL C T+TH AY VYA LM+ VYP+GIP    WWL  +R +LK+  RE  A L+P  +LW  Y+PS +YYEV+E  RRI LTG AVFI PDS AQ+AIVLLLA+VF+ +SE L+PF   V+  +YR G+ ++ ASMY+ALL + + S+E +Q+   FS  L+ AH  M++ V++Q
Sbjct:  641 CAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVV--ETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQ 1024          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 4.230e-90
Identity = 171/357 (47.90%), Postives = 231/357 (64.71%), Query Frame = 1
Query:  136 VLDLVRVEHGSTEEQVRAGRFLERKWYYF---RALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMG-FLSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVC---DKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMA----HLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVL 1170
            ++DLVRV       + R G     KW  F   R  +    PLT IKI++VVWQIVTQFA +    YP++YERFL+ L+++N ++G FLS+ C+V T+FY RL F+TI PL +L  L + + +A++    S+V M     KHLS ALF+VF IY SVS TIFQ F+C   D +V YLRADYSL C T TH    VYA LMV VYPIGIPA  AWWLA NR DL + DR        +L P ++LW  Y+P R++YE++E  RRI LTG+AVF+ P + AQ+AI +  A   L + E LAPF + +D  +YR G  ++  SMY+ALL + +AS+E+S++   F+  L+AAH+ MV+ VL
Sbjct:    5 IVDLVRVVDDGDGTKSRVG-----KWERFLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQ-DRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVL 355          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 6.980e-90
Identity = 180/399 (45.11%), Postives = 233/399 (58.40%), Query Frame = 1
Query:    1 CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLVRVEHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVCDKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAIFLV 1191
            C+VCA+ YAPG  Y C  CS  S    VG+                 DLVRV  G  +  ++  R L+ +   F+A +V  FPLTT+KIVVV WQI+TQF  IAG VYP+ Y+ FL+ L+ +NLD+GF LSYSC VTTDF+DRLL ATIGP+VVLA+L  T+ V RKR I+SE A+ A+  +H                                                                            DL+K DR+ + +L+P  +LW AY+PSR+YYE++E+VRRI LTGVAVF+LP S AQIA+VLLLA+VFLFISESL+PF   +D  +YRWGNG+ILASMYVALL +   SEE S+T +AF + LI A++FMV+TV+VQ+  LV
Sbjct:  387 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXAVVATDLVRVVDG--DRSIKDARTLKGRLSRFQAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNVLTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDLRHAK--------------------------------------------------------------------------DLQKADRDRLPNLQPLGDLWEAYKPSRYYYEIIEYVRRIMLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLV 709          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 7.940e-89
Identity = 164/332 (49.40%), Postives = 215/332 (64.76%), Query Frame = 1
Query:  223 RALLVKVFPLTTIKIVVVVWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVC---DKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDRE--------AMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALLQFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAI 1182
            R  +  V PLT+IKIV+V WQIVTQF+ +   VYP VYERFLS L+++N ++GF LS SCIV ++FY    FATI PLVV      TY V++ R   S   M A + KHLS  LF++F +Y SV   IFQ FVC   D  + YLRADYSL CYT  H+A MVYA LM+ VYP+GIPA  AWWL   R  L K             + HL+P R+LWA Y+P R+Y+EV+E   RI LTG+A F+LP+S AQ AI ++LA +F+ +S+ L+PF +  D  +YR G  I   SMY+AL+  + S+ED+Q+   F+  LIAAH  MV  ++VQA+
Sbjct:   17 RERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLALV--DVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAV 346          
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 4.370e-85
Identity = 153/308 (49.68%), Postives = 208/308 (67.53%), Query Frame = 1
Query:  277 VWQIVTQFADIAGNVYPDVYERFLSKLSIINLDMGF-LSYSCIVTTDFYDRLLFATIGPLVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSSTIFQVFVC---DKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALAWWLALNRVDLKKTDREAMA---HLEPFRNLWAAYRPSRFYYEVLEFVRRITLTGVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGIILASMYVALL-QFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQ 1176
            VWQIVTQFA +    YP++YERFL+ L+++N ++GF LS+ C+V T+FY RL F+T+ PL +L  L +T+ +A++    S+V M     KHLS ALF+VF  Y SVS TIFQ F+C   D +V YLRADYSL C T TH    VYA LMV VYPIGIPA  AWWLA NR DL +      A   +L P ++LW  Y+P R++YE++E  RRI LTG+AVF+ P + AQ+AI +  A   L + E LAPF + VD G+YR G  ++  SMY+ALL + +AS+E S++   F+  L+AAH+ MV+ VL++
Sbjct:   28 VWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLR 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24038.6506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSF5_9PHAE3.750e-13256.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI3_9PHAE8.990e-10548.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF7_ECTSI5.350e-9948.84Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5L324_9PHAE5.380e-9847.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI1.860e-9748.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTU5_ECTSI4.320e-9748.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHA3_9PHAE4.230e-9047.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWD7_ECTSI6.980e-9045.11Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G8S0_ECTSI7.940e-8949.40Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7FUB5_ECTSI4.370e-8549.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24038contigH-paniculata_contig24038:53..2425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.0
Seed ortholog evalue1.2e-86
Seed eggNOG ortholog2880.D7FTT9
Hectar predicted targeting categorysignal anchor
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1191
Cds size1191
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929690.1484458-CDS-H-paniculata_contig24038:52..3491622929690.1484458-CDS-H-paniculata_contig24038:52..349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24038 53..349 +
1691480968.5730884-CDS-H-paniculata_contig24038:52..3491691480968.5730884-CDS-H-paniculata_contig24038:52..349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24038 53..349 +
1622929690.164995-CDS-H-paniculata_contig24038:1531..24251622929690.164995-CDS-H-paniculata_contig24038:1531..2425Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24038 1532..2425 +
1691480968.5860634-CDS-H-paniculata_contig24038:1531..24251691480968.5860634-CDS-H-paniculata_contig24038:1531..2425Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24038 1532..2425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24038.6506.1prot_H-paniculata_contig24038.6506.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24038 53..2425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24038.6506.1

>prot_H-paniculata_contig24038.6506.1 ID=prot_H-paniculata_contig24038.6506.1|Name=mRNA_H-paniculata_contig24038.6506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=397bp
CAVCAEDYAPGVFYGCRRCSAASFRREVGMTVVVVLVVILGVTTFVLDLV
RVEHGSTEEQVRAGRFLERKWYYFRALLVKVFPLTTIKIVVVVWQIVTQF
ADIAGNVYPDVYERFLSKLSIINLDMGFLSYSCIVTTDFYDRLLFATIGP
LVVLAVLTSTYCVARKRYISSEVAMSAMRHKHLSAALFVVFFIYPSVSST
IFQVFVCDKDVFYLRADYSLECYTKTHRAYMVYAILMVCVYPIGIPAALA
WWLALNRVDLKKTDREAMAHLEPFRNLWAAYRPSRFYYEVLEFVRRITLT
GVAVFILPDSMAQIAIVLLLAMVFLFISESLAPFENWVDTGIYRWGNGII
LASMYVALLQFEASEEDSQTFTAFSIALIAAHIFMVVTVLVQAIFLV
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mRNA from alignment at H-paniculata_contig24038:53..2425+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24038.6506.1 ID=mRNA_H-paniculata_contig24038.6506.1|Name=mRNA_H-paniculata_contig24038.6506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2373bp|location=Sequence derived from alignment at H-paniculata_contig24038:53..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCAGTGTGTGCGGAAGACTATGCACCAGGCGTATTCTACGGCTGTCG CAGATGCTCCGCAGCAAGCTTTCGACGGGAAGTGGGGATGACAGTAGTGG TGGTGTTGGTAGTGATTCTAGGTGTCACCACATTCGTGCTGGACTTAGTG CGAGTTGAGCATGGCAGCACCGAGGAGCAGGTGAGGGCGGGAAGATTCTT GGAGCGAAAATGGTATTATTTCCGTGCCCTTCTCGTGAAGGTGTTTCCCC TGACCACCATCAAGATCGTCGTGGTCGTTTGGCAGATCGTCACCCAGGTA TGCCAAAGTTGCCCTCGTTTCTGCATGAAGCCGTTGCTTGTACTTTGATG TTTTCTTCGGGTAGAGACTGGCGACTCTTTGCAAACGGCAAGAGCCTCAT CAGGAATACGCGTGATACCGCTTGGGAGTCGATTCCAACTCCAAATCGAC TGATTTGAGAGGTATTGGTACATAATTTGTGCGATATCGCTGATATGTTA AAACATTCCCCTCAGTAATATTTCTGTACGGCATGAGTGTGCCATCTATT TTCACTACAGGTGGTTGACCCGGCACGGGTTTACGACACCTCAAGCCATC CAAGACTCGAAAAGTAGAATGGCACCATGGAAAAACTCGGGGATGGTCCA ACACTTGTTCGACGTCGAATTTAGCTCAACTATGTGAAATGTTTCAATCC CCCCATCCGCAATAGGGGCTGAACCGTCCCGATTTTCGAAGGAGGATAAT TGTTCACGGCGTTTGTACCTGTTAGGCAGCAAACATATTTACCACAACGT TCTACTCAACCCACAATGTATGGACTCGAAAAACGGGAAAACCAAGAGTC GAAGGTCATCGAGAATTCCTGGGGCAAAGGTCGGAATGCACGTTACAGGA TAAAGAAAGGAACGTGTGATTTCCGTTGGCTGAGCCAGGCCGTGGCTGAA CAGATAGAAGAATACGAGGAGAAAAACTTCTACTCAGCGTTGCGTGTGTT ACGGTTTTGAAGGAGTTAGGTGTTTTCTTGCCGTCGTTGCGATGAGGAAG AGAAGAACGCCTAGTAGTAGTCTTTGCACCCTGGCCTCGTAAAGATGCTA CCGCCTACGGCTAGGGATACGAGTCCCGCCCTCTTCAGATTATATACCAT GCTCTCAAGTACACGCATGTTGGTGTCTAACAAGCAAGTCAATGGTAGTT GTTGTTCGTTTGTAACCGATGTTGAATCTAAGGTTGATTACTTGTAGCAT GTCACGCCAGCGTTTTCGGTTTTTGTTGAGGCCAATCGGTAGGTCGTGCG AGAAAGAACGTTATTTCGACGCGTTCGCGACCGGACGATATCAAATGCCT CTCATTGCATATTTCACTTATTTCTTTGAAGCGTGCGAATCGCGCACGAG TCTGAATTTTGGACTTTTACACAATGGGTTGGTCGTATGACCCATACCAC CCCCGCTTTCTACTTACGATATCCGTCAGTTCGCTGACATCGCAGGAAAC GTCTACCCCGATGTGTACGAGAGATTCCTCTCCAAGCTGAGCATCATCAA CTTGGACATGGGCTTCCTGTCATACTCCTGCATCGTGACCACCGACTTCT ACGACCGTCTGCTGTTCGCCACGATCGGGCCGCTCGTGGTGCTGGCGGTG CTGACCAGTACCTACTGCGTGGCGAGGAAGAGATATATAAGCTCCGAAGT CGCTATGAGTGCGATGCGGCACAAGCATCTCTCCGCGGCGCTCTTTGTGG TGTTCTTCATCTACCCCTCAGTCTCCTCTACGATTTTCCAGGTGTTCGTC TGCGACAAAGACGTATTCTACCTTCGTGCCGATTACAGCCTAGAATGCTA CACCAAGACGCACCGCGCGTACATGGTGTACGCGATCCTCATGGTGTGCG TGTATCCCATCGGTATACCCGCCGCGCTCGCATGGTGGCTCGCTCTCAAC CGTGTGGATCTCAAGAAGACCGACAGAGAGGCGATGGCGCATCTGGAGCC GTTTCGCAATCTCTGGGCTGCGTACAGGCCGTCGCGGTTCTACTACGAGG TGCTCGAGTTTGTCCGTCGAATCACGCTGACCGGAGTCGCGGTTTTCATC CTCCCGGACAGTATGGCGCAGATAGCAATCGTTCTGTTGCTGGCGATGGT GTTCTTGTTTATTTCAGAGTCGCTGGCCCCCTTCGAAAACTGGGTAGACA CCGGCATATACCGTTGGGGAAACGGCATCATTCTGGCCAGCATGTACGTG GCCCTCCTGCAATTCGAGGCTTCCGAGGAGGACAGCCAGACCTTCACGGC CTTTTCGATTGCACTTATCGCGGCTCACATTTTCATGGTGGTTACCGTGC TTGTACAGGCAATCTTCTTGGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig24038:53..2425+

>mRNA_H-paniculata_contig24038.6506.1 ID=mRNA_H-paniculata_contig24038.6506.1|Name=mRNA_H-paniculata_contig24038.6506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at H-paniculata_contig24038:53..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCAGTGTGTGCGGAAGACTATGCACCAGGCGTATTCTACGGCTGTCG
CAGATGCTCCGCAGCAAGCTTTCGACGGGAAGTGGGGATGACAGTAGTGG
TGGTGTTGGTAGTGATTCTAGGTGTCACCACATTCGTGCTGGACTTAGTG
CGAGTTGAGCATGGCAGCACCGAGGAGCAGGTGAGGGCGGGAAGATTCTT
GGAGCGAAAATGGTATTATTTCCGTGCCCTTCTCGTGAAGGTGTTTCCCC
TGACCACCATCAAGATCGTCGTGGTCGTTTGGCAGATCGTCACCCAGTGT
GCAGTGTGTGCGGAAGACTATGCACCAGGCGTATTCTACGGCTGTCGCAG
ATGCTCCGCAGCAAGCTTTCGACGGGAAGTGGGGATGACAGTAGTGGTGG
TGTTGGTAGTGATTCTAGGTGTCACCACATTCGTGCTGGACTTAGTGCGA
GTTGAGCATGGCAGCACCGAGGAGCAGGTGAGGGCGGGAAGATTCTTGGA
GCGAAAATGGTATTATTTCCGTGCCCTTCTCGTGAAGGTGTTTCCCCTGA
CCACCATCAAGATCGTCGTGGTCGTTTGGCAGATCGTCACCCAGTTCGCT
GACATCGCAGGAAACGTCTACCCCGATGTGTACGAGAGATTCCTCTCCAA
GCTGAGCATCATCAACTTGGACATGGGCTTCCTGTCATACTCCTGCATCG
TGACCACCGACTTCTACGACCGTCTGCTGTTCGCCACGATCGGGCCGCTC
GTGGTGCTGGCGGTGCTGACCAGTACCTACTGCGTGGCGAGGAAGAGATA
TATAAGCTCCGAAGTCGCTATGAGTGCGATGCGGCACAAGCATCTCTCCG
CGGCGCTCTTTGTGGTGTTCTTCATCTACCCCTCAGTCTCCTCTACGATT
TTCCAGGTGTTCGTCTGCGACAAAGACGTATTCTACCTTCGTGCCGATTA
CAGCCTAGAATGCTACACCAAGACGCACCGCGCGTACATGGTGTACGCGA
TCCTCATGGTGTGCGTGTATCCCATCGGTATACCCGCCGCGCTCGCATGG
TGGCTCGCTCTCAACCGTGTGGATCTCAAGAAGACCGACAGAGAGGCGAT
GGCGCATCTGGAGCCGTTTCGCAATCTCTGGGCTGCGTACAGGCCGTCGC
GGTTCTACTACGAGGTGCTCGAGTTTGTCCGTCGAATCACGCTGACCGGA
GTCGCGGTTTTCATCCTCCCGGACAGTATGGCGCAGATAGCAATCGTTCT
GTTGCTGGCGATGGTGTTCTTGTTTATTTCAGAGTCGCTGGCCCCCTTCG
AAAACTGGGTAGACACCGGCATATACCGTTGGGGAAACGGCATCATTCTG
GCCAGCATGTACGTGGCCCTCCTGCAATTCGAGGCTTCCGAGGAGGACAG
CCAGACCTTCACGGCCTTTTCGATTGCACTTATCGCGGCTCACATTTTCA
TGGTGGTTACCGTGCTTGTACAGGCAATCTTCTTGGTCTTCGCTGACATC
GCAGGAAACGTCTACCCCGATGTGTACGAGAGATTCCTCTCCAAGCTGAG
CATCATCAACTTGGACATGGGCTTCCTGTCATACTCCTGCATCGTGACCA
CCGACTTCTACGACCGTCTGCTGTTCGCCACGATCGGGCCGCTCGTGGTG
CTGGCGGTGCTGACCAGTACCTACTGCGTGGCGAGGAAGAGATATATAAG
CTCCGAAGTCGCTATGAGTGCGATGCGGCACAAGCATCTCTCCGCGGCGC
TCTTTGTGGTGTTCTTCATCTACCCCTCAGTCTCCTCTACGATTTTCCAG
GTGTTCGTCTGCGACAAAGACGTATTCTACCTTCGTGCCGATTACAGCCT
AGAATGCTACACCAAGACGCACCGCGCGTACATGGTGTACGCGATCCTCA
TGGTGTGCGTGTATCCCATCGGTATACCCGCCGCGCTCGCATGGTGGCTC
GCTCTCAACCGTGTGGATCTCAAGAAGACCGACAGAGAGGCGATGGCGCA
TCTGGAGCCGTTTCGCAATCTCTGGGCTGCGTACAGGCCGTCGCGGTTCT
ACTACGAGGTGCTCGAGTTTGTCCGTCGAATCACGCTGACCGGAGTCGCG
GTTTTCATCCTCCCGGACAGTATGGCGCAGATAGCAATCGTTCTGTTGCT
GGCGATGGTGTTCTTGTTTATTTCAGAGTCGCTGGCCCCCTTCGAAAACT
GGGTAGACACCGGCATATACCGTTGGGGAAACGGCATCATTCTGGCCAGC
ATGTACGTGGCCCTCCTGCAATTCGAGGCTTCCGAGGAGGACAGCCAGAC
CTTCACGGCCTTTTCGATTGCACTTATCGCGGCTCACATTTTCATGGTGG
TTACCGTGCTTGTACAGGCAATCTTCTTGGTC
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