mRNA_H-paniculata_contig2394.6477.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2394.6477.1
Unique NamemRNA_H-paniculata_contig2394.6477.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: D7FV45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV45_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.550e-31
Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 
Query:    1 MAVKQIMVAMAVVLTCLVSGSSAFFVPLAPVAAGFRGPASFNTRTTSGTRG-MLMGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESNFMAQVFHTGMDDWEEVDIFNE 363
            MA KQ++      L CLV+ S AF  P+  +    R PA+ + R+T+  RG  LM CRVNAKKEKR RNR NMRKFNKRG SRKK++RVERQERAAE E+ F+A+VFH+GMDDWEEVDIF+E
Sbjct:    1 MAFKQLLA-----LACLVASSLAFVTPMTTL----RAPATTSARSTASARGGALMSCRVNAKKEKRTRNRLNMRKFNKRGTSRKKILRVERQERAAEDEAEFLAKVFHSGMDDWEEVDIFSE 113
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A835ZDX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.940e-10
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 1 
Query:   37 VLTCLVSGSSAFFVPLAPVAAGFRGPA-SFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESNFMAQV 315
            V+ CLV+ ++AF        + F G A S  T TT+    + M CR NAKK+K +RN+DNMRKF KRG S+KK++R +RQ+ A E E++FMA++
Sbjct:    9 VVLCLVAMATAF-------TSAFTGAALSQGTATTAAASPLTMACRNNAKKQKAKRNQDNMRKFRKRGTSKKKIVRGKRQQTAREKEADFMAKL 95
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7S2MH60_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MH60_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.960e-9
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:  112 PASFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKF-NKRGVSRKKVMRVERQERAAEAESNFMAQVFHTGMDDWEEVD 351
            PA+F  RT++     L GCRVNAKKEKRQRNR+NMRKF +KRG SR+K M+  +  +A  AE+ F+A+ F T     E  D
Sbjct:   24 PATFGVRTSTA----LNGCRVNAKKEKRQRNRENMRKFKSKRGTSRRKTMKKLQSNQARAAEAEFLAKCFITMPPPGETAD 100
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A835YKP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.120e-9
Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = 1 
Query:   82 LAPVAAGFRGPASFN----TRTTSGTRGML-MGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESNFMAQVF 318
            LA  A+ F  P++F     +++TS +   L M CR NAKK+K +RN+DNMRKF KRG S+KK++R +RQ+ A E E++FMA+++
Sbjct:   12 LAATASAFLAPSAFTGMQISQSTSTSESRLSMACRNNAKKQKAKRNQDNMRKFRKRGTSKKKIVRGKRQQTAREKEADFMAKLY 95
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7S4HRS8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRS8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.200e-9
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:  118 SFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESNFMAQVF 318
            SF  RT   +   L GCRVNAKKEKRQRNR+NMRKF +RG+S++K M+     +A +AE+ F+A+ F
Sbjct:   26 SFGVRTAVESTTELQGCRVNAKKEKRQRNRENMRKFQRRGLSKRKTMKKAFSAQARQAENEFLAKCF 92
[Close]
BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7R9YX41_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YX41_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 7.620e-9
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1 
Query:  118 SFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESNFMAQVF 318
            SF  R    +   L  CRVNAKKEKRQRNR+NMRKF KRG+SRKKVM+     +A +AE+ F+A+ F
Sbjct:   49 SFGVRNAVCSTTELEACRVNAKKEKRQRNRENMRKFQKRGLSRKKVMKKAFSAQARQAENEFLAKCF 115
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A6S9AXI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AXI8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.970e-8
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:  112 PASFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKF-NKRGVSRKKVMRVERQERAAEAESNFMAQVFHTG 327
            P+ F  RTTS T   L  CRVNAKKEKRQRNR+NMRKF +KRG SR+K M+  +   A  +E+ F+A+ F  G
Sbjct:   24 PSPFGLRTTSST--ALEACRVNAKKEKRQRNRENMRKFKSKRGTSRRKTMKKLQANAARASEAEFIAKCFALG 94
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BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7S1GM72_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM72_CYCTE)

HSP 1 Score: 62.0 bits (149), Expect = 3.060e-8
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1 
Query:  136 TSGTRGMLMGCRVNAKKEKRQRNRDNMRKFN---KRGVSRKKVMRVERQERAAEAESNFMAQVF-HTGMDDWE 342
            T+ T   L GCRVNAKKEKR+RNR+NMRKF    KRG+SR+K+++  +  +A + E+ FMA+ F H G+ D E
Sbjct:   30 TTSTSTRLFGCRVNAKKEKRKRNRENMRKFKSTGKRGMSRRKMLKKVQAAKARQEENEFMAKAFLHVGVTDVE 102
[Close]
BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7S2A5Y1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5Y1_TRICV)

HSP 1 Score: 58.5 bits (140), Expect = 4.660e-7
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 1 
Query:  118 SFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKFN-KRGVSRKKVMRVERQERAAEAESNFMAQVF 318
            SF  RT + +   L  CR NAKKEKRQRNR+NMRKF  KRG SRKK M+  +   A + E+ F+A+ F
Sbjct:   26 SFGVRTAAPSTTELEACRANAKKEKRQRNRENMRKFQRKRGTSRKKAMKKIQSNEARQKEAEFLAKCF 93
[Close]
BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Match: A0A7S4T0P1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T0P1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.730e-6
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 1 
Query:  112 PASFNTRTTSGTRGMLMGCRVNAKKEKRQRNRDNMRKF-NKRGVSRKKVMR 261
            P+ F  RTTS T   L  CRVNAKKEKRQRNR+NMRKF +KRG SR+K M+
Sbjct:   24 PSPFGLRTTSST--ALEACRVNAKKEKRQRNRENMRKFKSKRGTSRRKTMK 72
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2394.6477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FV45_ECTSI2.550e-3161.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDX5_9STRA9.940e-1046.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MH60_9STRA2.960e-951.85Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A835YKP5_9STRA3.120e-947.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4HRS8_9STRA3.200e-953.73Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9YX41_9STRA7.620e-956.72Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6S9AXI8_9STRA1.970e-854.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1GM72_CYCTE3.060e-852.05Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2A5Y1_TRICV4.660e-752.94Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4T0P1_9STRA3.730e-666.67Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2394contigH-paniculata_contig2394:10077..16033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score128.3
Seed ortholog evalue2.5e-27
Seed eggNOG ortholog2880.D7FV45
Hectar predicted targeting categorychloroplast
EggNOG OGs2E66M@1,2SCXT@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_005120.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1632
Cds size366
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2394.6477.1prot_H-paniculata_contig2394.6477.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2394 10077..14767 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929684.4744308-CDS-H-paniculata_contig2394:10076..102181622929684.4744308-CDS-H-paniculata_contig2394:10076..10218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 10077..10218 +
1691480966.5433881-CDS-H-paniculata_contig2394:10076..102181691480966.5433881-CDS-H-paniculata_contig2394:10076..10218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 10077..10218 +
1622929684.4879942-CDS-H-paniculata_contig2394:10641..106911622929684.4879942-CDS-H-paniculata_contig2394:10641..10691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 10642..10691 +
1691480966.5553856-CDS-H-paniculata_contig2394:10641..106911691480966.5553856-CDS-H-paniculata_contig2394:10641..10691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 10642..10691 +
1622929684.5043578-CDS-H-paniculata_contig2394:13712..137541622929684.5043578-CDS-H-paniculata_contig2394:13712..13754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 13713..13754 +
1691480966.5698612-CDS-H-paniculata_contig2394:13712..137541691480966.5698612-CDS-H-paniculata_contig2394:13712..13754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 13713..13754 +
1622929684.521176-CDS-H-paniculata_contig2394:14635..147671622929684.521176-CDS-H-paniculata_contig2394:14635..14767Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 14636..14767 +
1691480966.5878353-CDS-H-paniculata_contig2394:14635..147671691480966.5878353-CDS-H-paniculata_contig2394:14635..14767Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2394 14636..14767 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929684.5391848-UTR-H-paniculata_contig2394:14767..160331622929684.5391848-UTR-H-paniculata_contig2394:14767..16033Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2394 14768..16033 +
1691480966.60279-UTR-H-paniculata_contig2394:14767..160331691480966.60279-UTR-H-paniculata_contig2394:14767..16033Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2394 14768..16033 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2394.6477.1

>prot_H-paniculata_contig2394.6477.1 ID=prot_H-paniculata_contig2394.6477.1|Name=mRNA_H-paniculata_contig2394.6477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MAVKQIMVAMAVVLTCLVSGSSAFFVPLAPVAAGFRGPASFNTRTTSGTR
GMLMGCRVNAKKEKRQRNRDNMRKFNKRGVSRKKVMRVERQERAAEAESN
FMAQVFHTGMDDWEEVDIFNE*
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mRNA from alignment at H-paniculata_contig2394:10077..16033+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2394.6477.1 ID=mRNA_H-paniculata_contig2394.6477.1|Name=mRNA_H-paniculata_contig2394.6477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5957bp|location=Sequence derived from alignment at H-paniculata_contig2394:10077..16033+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGTCAAGCAGATAATGGTGGCAATGGCGGTGGTACTTACGTGCCT
TGTAAGCGGGTCTTCGGCCTTCTTTGTACCCCTCGCGCCGGTCGCGGCGG
GGTTCCGCGGCCCGGCATCCTTCAATACTCGAACAACCTCAGGTACAAAA
CACCCCAACATGTGCTGCCAAAAGTGAGGACAAGGTGCCTTCGCTTTGGT
TGTACGGCAATGCGTTATGCGGATGATGGTGTTGTGGTTCTTTCGACGGT
TGGTGGTATATTGCGAAACTGGGTGGGTTATGGATGAAAGTGTTTTCGAA
AAGGAACGGGGATGGTCGCTCTTCCCCACGTGGAACCAGAGGCTATTGTC
AAGTTTGCATGCGTATTTCAATTTCAAGTCGATCATGTGTTGGTGTAGTC
ATGTTATGTTCATCGTATGTCATGGTGTAGCAACTGCACCGCAGCCAATG
AGTTTTTCATGCGAGGATGTTGAGTAGTGTCAACCCGAGGCTGCATGCTC
TTTGTATCAAACTGTTGGAGCCATTGTCCTTTTGTCTGCTGTCCCTGCCA
CCTCTCCGTCGCAAGGTACTCGGGGCATGCTCATGGGGTGTCGAGTAAAC
GCCAAGAAGGAGAAGGTGCGTGTACCGTGAACCTGTAAATCTGTGTCATT
AGAGCATGCCAGCGAACAGCCGTAATCTAGGATATGGGTGTGTGGCAGCT
GATGGGATTTACACTAACCACCAGTCTTTCAGCCTGGTTGTCACCCTCGG
GCACTGGTGTATTGCACTTTTTGAAGTATTCGCCAGTACCATATGTCAAT
TTTTCAACCTGGGGTTTGCAAGTCTTCTCACAACATGCAACTAAGTGCTC
TATCCTCAGTTTACTGTTTTTCTCAATAAAATGTTCTATTGAAATATGAC
ACTCGCAGAAACTAAATGACATTATACTATATAACATGAATTCATCCATC
TGTAGAAGCAAGCATAAGACCAACTGTCAAGGCGATAATGAGAAAGATGA
AAATGGGCAGGGATGGGGTAGATACGCATTGATACCGAGTGAAAATCAAA
TAGCCCGTGACAAAAATGTGTAATTGTAAGGAAACGAGCCCCGTTTTTTG
TTGTGCACAAGTGGGACTTTTCACTTGGTGTTGGTGAGCATGCCTGCACC
ATTCCTGATCATTTTCATCTTCTCGTTTTCGCTGCCACAAGAGTTGGCCT
AAATCCTGATACCTGTAACAGAGTGTCCCCATACTTCAGTACAGGCCCTG
TGCTATTGGGACACCACACAAGTTAGGACTGATCGCCAATTGCCTGAATC
CTGAGCACATCGTATCACCATAAACAGTACAGCACCTGGTCTACTACAAC
ACACCAAAAGTTGCCACTGCTTGCTAGCGGAGTCAAGCATGCCGGGTCGA
ACCCCCCGCTCATTACCCGATAGGCTCGAGATTCAGCCCATGCGACGGAC
ATGAGATGAATTAGATCCTCCACGGCTCGTGCGGATGACTGCGTGGATAA
ATCTTGACGATCGGTATATAACTGTCATTGGGCGATCCATGTGTAGAATT
CGGATCGTTAAAATACTTTTAATCCTCATCGCGGTAAATTGTGATGAGAG
GACCTGCTCCATATCCTCTTGATCATGCTGAAGTCGTTGCTAGAGAAGGA
CCCACACTTTTTTTCATACGTGCGTGAGATGTGAGATGTAAAAAGTGGCG
ACGCTCGAAGGTTAAAGGCTCAACAAAATCAAAGGAATCCCCACGTACCT
ACGCCCGAACGGGTAGGGTAGGTCATGAACTGAGCATGACTGGGAGTCTA
GTCAGAGGTCTTTTAGTGGGTGCAACCCCCACACTGCCTACTTGGTTCGG
CCGAACCGGGGTGGCGCCTACTCCTCAGAGGTATAAATAACTCTGTTCTG
TTGAACTGCGTTGGTAAAATACTCAAGAATGGAAGCATTGGTAAAGGTTT
TTGCCTCAGCGTTCCGGGGGTTAAAGGAAAAGAAAGGCATCATAGATTCT
CTATTCCACCGTAGTACCCCTCGGTGCACATTATTCAAAGACAAGCACTT
TGATGTGATTGTGTTGAGCAAACGCCCACACCAGAAACAGGGAATGGTTA
CACCACCAAACAAATGGTGGGCCGTAAATCAAAACCAATCACTTATCAGT
GCACATTTCTTCCGGCACAAGACGATTCTGTACAGAAAGCATCTCACCAC
TGAGCTACCCAAACAGCGCTGACACAGTGGTTCAGTGTTGAGCCCTTTTT
GTCTGTTTTCATGGTTGTCCAAACTTGCAAATGTGCCAACATGGGATATC
AATTATTCTCCTCGCCTCTTGAACAGCCTATCAATACGCTCCAAAAGGTT
CTCGACTTGGCGCTCGACGTCTCGACTTATACGTATTTTCACCTTTACAT
TTTTGATTGTACTCGTAAAAATACCTGTGCCAGCACCACGAGGATCGAAC
CCAGTGCTCTGTCGAGCGTATTGTTCGGGGGAATTGATACCTGATGGTTA
TAGACGTGAAGGATTGGAAAACAGGAAAACCTGGGAACCACTCTCGCGAG
TGATGGGAAAGCGTTGCTGAATATAAACGGATTTGCGGTAGGCGTTTAAC
TCTGCAACTGAAACATCTTCGAGCCCTGTGACTTTTGATGGCTCAATATT
CCGCACTAACTATGTTTAGCGCGTGTCATGAAACTGAGAACCCACAGCGA
CCAGCTCGCCATGTATCCTTTTCAAAGGCTGGATATCTTGTGATAATGTA
CGTTTGTATGCGTAGTATATCCTTGTAGCTGGCTTCCGGTTGCAAAGACT
CCAAAATAGCGTTAGGAAACTGAACAGTAGCTGATACCATTCCAAGCATG
CTGGGTGAGACAATTAAGCCAAAAAATCTCTTGGAACAAAGAAATCACAC
ATTCAAAGACTACTTCGTTGGTTGCAGTAGATGTCTGCGACTGGATGCGG
AAAATGGAACCACGACTTCAACGCCCGCGGTAAGTCCCCGGCTTACCGGC
ACAGCTTGAACCAGATTACTCGGACTGCTGAAGTCTTGCCAATGCATTGT
AAAACTTGGCTACAAGAAAATCTGTACGCACAGTAGACATGGTGGGAGTC
GCCAGCACTGGTTGTTTAGCAACCGGCAATGATAGCTGCAGGTGACTATG
ATTCTGTGGGAATCTGGTCCGTACTCATGAACAAAAGAGAAGATGGGCAA
AAGCGATGGTCCACATTCGGGCAATCGAAATATCCTGTAAATTAATCAAA
TCCTGTACACGAACAATACACGTACCGCATGTAATGATTTAGTGGGGAAT
TTGCGAGAACTAACTGTAGAACGACTGTGTGTCAGACGGACGTCCTGGAA
TATGTCCTTGTAAAGACGCCCGAAGATGATACATCTCAACATCTTGACCG
TTTGTAATCGTCCCGTCGTGATTCACTATGTAGACTTCTCATTCAAGGTC
ATAGTGTGCGGCAACTCTGCTAACTACCCCCCTCACCACCGGTATTAAAT
TCACCTCTATGTCAAAGTTGACTATAACGCTATATATCCTATACACAACG
CCATTGAACCATTTCATATCTGATCGTCTTGTTTGTTGGCTATGTTCCTT
TCCCGCTCTACTTTATTCGTGTATTGCGGCGAGCAGAGGCAGCGCAATCG
GGACAACATGCGCAAGTTCAACAAGAGGGTAAGCGTGTATCCAGTAGTTG
TTCTATTTAGAGAAGTACAATGGCTACCATTCAGTCAACGTCTAAAGAAT
CAAAACTGGCAGTTGGCCTTCCTATTAATATATATGGTACAGCTCGTGTC
TTCACAGGTCATGAGTTTCTCTGCCGCTGACTCCCCTTTATTTTCCAGTG
TTCGGTCCGTGTTCTCTTCTTTGTAGCCTCTTGTTGAAGAATTTTCCTAC
GTGTGAGTCATCTGATCACCCGGAAGCCGCTCGCCTGTCTTGCTGTGTGA
AGTACGGTACCATAGCTCGCCACAAGAAGAGGAGACACTAAACCGGGGTA
GGCAACGACTTGACGCGCAATGAAGTAGCGTTATTTGTTTTATGGTATTC
GAAAGAGGCCCGTGTCAACTATTAGCAAAATATTTGATGACCCACAAGTC
ATGTTCCTGTACAATCAGCCGATCTGCGCCCTTCATCTCTCTCTCTATAT
ATATATCTGGTGGGTCACGGAGTTGACTTGCTTCGGTTTCTGTAGGATTC
GGGCGGAATTTGACACGTGCTTGATTCGGTCGTTCCAGCGGCCTCCAGAA
GATGGAATTTGTGACTAGTCTGTAGTCACTCCCCTGTGGTGCGTAGATTT
GAATATATATGCATATCTTTTTTTGTGACTCGAGGATGCCAGGCGAGCGA
TTGGTCCGACTACTGCCGCGGCGTTCTGTGTTTCTTTTTCTTGTAGGGGG
CGTCTGTAAACGTTCACCTAGACCCCGTGACTGCTGAGAAGGGATTTTCT
CGACTATCCTCTACCCGAACGCCCATTATATGCTTTCGTTATGTGACTGT
AGCTCGTAACCCTGACGCCTTTTCGGGCTGTCCCGGTTTTTTTACTTGGG
CGTGCGCAGGGTGTGTCGAGAAAGAAAGTTATGCGTGTCGAGCGTCAAGA
ACGAGCCGCTGAAGCTGAGTCGAATTTTATGGCTCAGGTTTTCCACACCG
GGATGGATGACTGGGAGGAGGTCGACATCTTCAACGAGTAAACGGCTCGA
AAGGGGGTTATTTAGGGGGAACAATAAGTCACAGGATTGTTTTTCGTCTC
TGGTTTCATCACATGTTCGTATCGGGCATTGTTTTAGGCTCTGACACAAG
GGATAGGAACTCGGGTCTAGTGAAGGGACTCTTTGGTGAAGATTCTGACG
CTGGAGTTTGGAAAAGCCGGACTGGTGTTAATGTACCATGGTCAACTGTG
CCAGGGCTGGCGTGGCTATGCCGCTGACGGTATTGAAGGTTGGCTGATGT
GTTTGCACTTGTCGTTGTCGCTCCCTTATGGCGTGCGGATGGCATGGAGG
CTGCATTAGCTCGCCGATATCAACTTCTTAGTCGACCACCAACCACACTG
TCTGTCTAGTTCTAAAAAAACGAGATACACCTGGGTGCAAGTGCTCGATG
GAGGTGTGACGTCGGCGATCATAATCCTTCGATAAGCAAGATAATCCAGA
ATAGGGTTTAGTGTTAGGGCGATACTGGTGAGCACGAGATCTGACCATAT
GGTCGGCGTTCTTGGGGGGCTCATCCGTGGGGGCGAGTGGCTTGTAAGGC
AGAGTTAGTTTATATCCGAATCTGGACGCCGATTTTTCTGATCCGTCCTA
GTGAGGCTTGAGACGGGCGTACTCTTGCTTTGCATGCCGTAGTGGAGAGG
CAATTGACCTCGTCCTGGAGAAGACGAAAAAGGGGTTTTGTATCGTCAGA
AAGCACGGGGCATGCTCCATCTTACCGGTGTGAGCAGTATTCGGTAACTT
TGGCGAGATTGACTCCCGTTTTACAACATGCCTACACTCAAGAAAACCAC
CGGCCAACCTAGCGGTAATGGGCGAGAGGGGAACAGCGGTTCTTCCGTCC
AAAACCGTTACCTGTTCCTATATACATGCTTATTTCACGCCGCACAAACC
GTTACTGAGATTACAGACTCTAGACGTACATTCTTGCCTGAGTCTATTTG
GAAGTAAAAATATTCCAGACCCTAGTTTAACACAATAACGCAATGCCGTA
CTTTTGTTCCCTGGCAGATGAGGTTGAAGGCTCCCACGCCGTGTACTGAC
AAGCTGTCCACGGGGGGAAGCGTGGCAGCGGTACGCAATACCCCTTTATG
TATATAACAGCACGATATTCGCAAAGCAACCATTTTGCTGAACTCAGAAA
CGTTCGGTATGTTCGCCCAGGCGGTTCGTCATGAGTCATGGGTTACATGA
AGTACGCGGCGGCTAATTCGATATTTCTTTACAACGAACAGCGTTCTGTA
TGCCTCT
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Coding sequence (CDS) from alignment at H-paniculata_contig2394:10077..16033+

>mRNA_H-paniculata_contig2394.6477.1 ID=mRNA_H-paniculata_contig2394.6477.1|Name=mRNA_H-paniculata_contig2394.6477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig2394:10077..16033+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGTCAAGCAGATAATGGTGGCAATGGCGGTGGTACTTACGTGCCT
TGTAAGCGGGTCTTCGGCCTTCTTTGTACCCCTCGCGCCGGTCGCGGCGG
GGTTCCGCGGCCCGGCATCCTTCAATACTCGAACAACCTCAGATGGCGGT
CAAGCAGATAATGGTGGCAATGGCGGTGGTACTTACGTGCCTTGTAAGCG
GGTCTTCGGCCTTCTTTGTACCCCTCGCGCCGGTCGCGGCGGGGTTCCGC
GGCCCGGCATCCTTCAATACTCGAACAACCTCAGGTACTCGGGGCATGCT
CATGGGGTGTCGAGTAAACGCCAAGAAGGAGAAGGTACTCGGGGCATGCT
CATGGGGTGTCGAGTAAACGCCAAGAAGGAGAAGAGGCAGCGCAATCGGG
ACAACATGCGCAAGTTCAACAAGAGGAGGCAGCGCAATCGGGACAACATG
CGCAAGTTCAACAAGAGGGGTGTGTCGAGAAAGAAAGTTATGCGTGTCGA
GCGTCAAGAACGAGCCGCTGAAGCTGAGTCGAATTTTATGGCTCAGGTTT
TCCACACCGGGATGGATGACTGGGAGGAGGTCGACATCTTCAACGAGTAA
GGTGTGTCGAGAAAGAAAGTTATGCGTGTCGAGCGTCAAGAACGAGCCGC
TGAAGCTGAGTCGAATTTTATGGCTCAGGTTTTCCACACCGGGATGGATG
ACTGGGAGGAGGTCGACATCTTCAACGAGTAA
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