mRNA_H-paniculata_contig2385.6448.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2385.6448.1
Unique NamemRNA_H-paniculata_contig2385.6448.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: D8LNC5_ECTSI (Nuclear nucleic acid-binding protein C1D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC5_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.630e-51
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 2 
Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQARNGSNSLPGSSAGAGIGRSNPAGQPVNNSAQ 466
            ++VRPLTLMSREEVG CVS  DRA LNLQ+AYGV+SLFYMFLKTQGVSPS HPVK ELDRI+GYFGRL+ VGKPPE+R LK+D +ASRRFIN+ALSGD+VW++A+  +   S     A AGIGR+NPAGQP + SAQ
Sbjct:   26 NSVRPLTLMSREEVGGCVSAKDRATLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKGELDRIRGYFGRLKNVGKPPEQRTLKVDQDASRRFINAALSGDSVWQNAKGTD-PKSAQQKRASAGIGRANPAGQPEDFSAQ 161
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A835ZH36_9STRA (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH36_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.990e-17
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:   62 VRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGD 349
            +RPLT  +REE+ + V+  + AKLN  MAYG++SL+YM L+T+G   ++H VK ELDRIKG  GRLQ V  P  +R + ++  A++RFI   L+G+
Sbjct:   39 LRPLTETTREELASQVTKQEMAKLNAAMAYGISSLYYMLLRTKGCDTTDHGVKKELDRIKGAMGRLQMVKVP--QRGIVVNVAAAQRFIKHGLAGN 132
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A2R2MU34_LINUN (Nuclear nucleic acid-binding protein C1D n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MU34_LINUN)

HSP 1 Score: 90.1 bits (222), Expect = 8.770e-17
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 2 
Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQAR 376
            DT++PL +    EV   ++P D AK+NL  AY V SLF+ +L  +G +P  HPVK ELDRI+GY  R++++ +  +E+  K+D  AS+RF+ SAL     W+ A A+
Sbjct:   32 DTLKPLLMTPLNEVHEKLNPLDCAKVNLVAAYAVNSLFWTYLNVRGENPKEHPVKQELDRIRGYMNRVKEIQE--KEKAPKLDKPASKRFVKSAL-----WQAAHAK 131
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A6B2LJS6_9EUKA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LJS6_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 2.670e-16
Identity = 41/95 (43.16%), Postives = 65/95 (68.42%), Query Frame = 2 
Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            + + PL      ++   ++P D AKLN+ +AY   +LFY+FLKTQGV  ++HPV  E++++K Y  +L+KV + PE  K++I+ EASRR I++AL
Sbjct:    6 NLLNPLFASKLSDLQTKLTPLDNAKLNITLAYTTYTLFYLFLKTQGVDTTDHPVINEINKVKSYIQKLKKVSEAPEGPKVRINQEASRRVISAAL 100
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A2D4BWA5_PYTIN (Nuclear nucleic acid-binding protein C1D n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWA5_PYTIN)

HSP 1 Score: 86.7 bits (213), Expect = 9.630e-16
Identity = 48/113 (42.48%), Postives = 75/113 (66.37%), Query Frame = 2 
Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSN---HPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQ 370
            L+A  + ++ L   S EE  A +SP ++AK+ + +AY + +L Y++LKTQGVS  +     VK ELDR+KG+  +++   +  +   LK+D EAS+RFIN+ALSGD V+ DA+
Sbjct:   16 LAAVEEHLQVLKNKSLEEFLAELSPIEKAKVQVSLAYSINALLYVYLKTQGVSSKDIRQTHVKQELDRVKGFIKKIKDTEELAKGPTLKLDKEASQRFINNALSGDQVYVDAK 128
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A485LE36_9STRA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE36_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.610e-15
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 2 
Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSN---HPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDA 367
            LSA  + +  LT    EE+ A + P D+AK+ + +AY + +L Y+ LK QGVS  +     +K ELDR+KGY  +++   +  + RK +IDAEA+ RFIN ALS D V+ DA
Sbjct:   12 LSAVEEYLDILTQKPIEELTATLPPIDKAKVQVGLAYSINALLYVLLKAQGVSSKDIRTTQIKQELDRVKGYIQKIKYSEEMAKGRKARIDAEAAGRFINHALSSDQVYTDA 123
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: UPI001F04DAC0 (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04DAC0)

HSP 1 Score: 84.0 bits (206), Expect = 4.750e-15
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 2 
Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            +T+ PL   S +E+   +   DRAKL+L + YG+ ++F+++L TQGV+P  H VK ELDRIK Y  +++ V +  ++  +KID +A+RRF+  AL
Sbjct:   31 ETLEPLLRSSNDELHEKLDVLDRAKLDLMVVYGINTMFWIYLITQGVNPKEHGVKHELDRIKNYMKKVKDVSER-KKASMKIDKDAARRFVKGAL 124
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A0L0GDR7_9EUKA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GDR7_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 1.410e-14
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:   62 VRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            + P+   ++EE+ A ++PA+RA+L L MAY  +S+F+M+L T GV P  H +K ELDR+K Y GRL++   P      K+D  A+ RFI   L
Sbjct:   30 LEPILNCNQEELKAKLTPAERAQLELAMAYAASSMFWMYLTTTGVDPRTHAIKGELDRVKAYMGRLKEATAPKNA--AKLDMAAAGRFIRGGL 120
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A024UHM0_9STRA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHM0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.510e-14
Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNH---PVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQA 373
            L A  + +  LT    +E+ A ++P D+AK+ + +AY + +L Y+ LK QGVS  +     VK ELDR+KGY  +++   +  + RK ++DAEA+ RFIN ALS D V+ +A A
Sbjct:   12 LGAVEEYLNVLTTKPIDELTAELAPIDKAKVQVGLAYSINALLYVLLKVQGVSSKDGRQTQVKQELDRVKGYVQKIKYSEEMAKGRKTRVDAEAAGRFINHALSSDQVYAEAVA 125
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BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A8J4PQY2_9MYCE (Nuclear nucleic acid-binding protein C1D n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQY2_9MYCE)

HSP 1 Score: 82.0 bits (201), Expect = 1.670e-14
Identity = 42/101 (41.58%), Postives = 69/101 (68.32%), Query Frame = 2 
Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEER-KLKIDAEASRRFINSAL 340
            L  +LD    ++L   +E    ++P + AKLN+ +AY + SLF+M+L+TQGVSP +H VK EL+RIK Y  +L+ +    EE+ K++ID++A++R I++ L
Sbjct:   24 LEGQLDPFFKVSLKEHQEK---LTPVESAKLNITVAYALNSLFFMYLQTQGVSPHDHQVKNELERIKPYILKLKSMTNKTEEKPKMQIDSDAAKRMIDNTL 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC5_ECTSI2.630e-5171.53Nuclear nucleic acid-binding protein C1D n=1 Tax=E... [more]
A0A835ZH36_9STRA2.990e-1747.92Nuclear nucleic acid-binding protein C1D (Fragment... [more]
A0A2R2MU34_LINUN8.770e-1742.99Nuclear nucleic acid-binding protein C1D n=1 Tax=L... [more]
A0A6B2LJS6_9EUKA2.670e-1643.16Nuclear nucleic acid-binding protein C1D n=1 Tax=A... [more]
A0A2D4BWA5_PYTIN9.630e-1642.48Nuclear nucleic acid-binding protein C1D n=2 Tax=P... [more]
A0A485LE36_9STRA1.610e-1542.86Nuclear nucleic acid-binding protein C1D n=1 Tax=A... [more]
UPI001F04DAC04.750e-1542.11nuclear nucleic acid-binding protein C1D-like n=1 ... [more]
A0A0L0GDR7_9EUKA1.410e-1443.01Nuclear nucleic acid-binding protein C1D n=1 Tax=S... [more]
A0A024UHM0_9STRA1.510e-1440.35Nuclear nucleic acid-binding protein C1D n=1 Tax=A... [more]
A0A8J4PQY2_9MYCE1.670e-1441.58Nuclear nucleic acid-binding protein C1D n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2385contigH-paniculata_contig2385:4346..8785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.0
Seed ortholog evalue5e-43
Seed eggNOG ortholog2880.D8LNC5
Preferred nameC1D
KEGG koko:K12592
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000176,GO:0000178,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003714,GO:0003723,GO:0003725,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016922,GO:0017053,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030234,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032069,GO:0032991,GO:0033036,GO:0034470,GO:0034472,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035257,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051336,GO:0051427,GO:0051641,GO:0060255,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071039,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140110,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901917,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905354,GO:1905777,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.maturation of 5.8S rRNA
EggNOG OGsKOG4835@1,KOG4835@2759
Ec32 ortholog descriptionExosome-associated factor Rrp47/DNA strand repair C1D
Ec32 orthologEc-04_004370.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Exons3
Model size3218
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2385.6448.1prot_H-paniculata_contig2385.6448.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2385 5017..6207 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929680.6197357-UTR-H-paniculata_contig2385:4345..44051622929680.6197357-UTR-H-paniculata_contig2385:4345..4405Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 4346..4405 +
1691480964.6794808-UTR-H-paniculata_contig2385:4345..44051691480964.6794808-UTR-H-paniculata_contig2385:4345..4405Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 4346..4405 +
1622929680.6309917-UTR-H-paniculata_contig2385:4997..50161622929680.6309917-UTR-H-paniculata_contig2385:4997..5016Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 4998..5016 +
1691480964.6962736-UTR-H-paniculata_contig2385:4997..50161691480964.6962736-UTR-H-paniculata_contig2385:4997..5016Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 4998..5016 +
1622929680.6763678-UTR-H-paniculata_contig2385:6207..87851622929680.6763678-UTR-H-paniculata_contig2385:6207..8785Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 6208..8785 +
1691480964.7295325-UTR-H-paniculata_contig2385:6207..87851691480964.7295325-UTR-H-paniculata_contig2385:6207..8785Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2385 6208..8785 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929680.6448991-CDS-H-paniculata_contig2385:5016..51771622929680.6448991-CDS-H-paniculata_contig2385:5016..5177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2385 5017..5177 +
1691480964.709055-CDS-H-paniculata_contig2385:5016..51771691480964.709055-CDS-H-paniculata_contig2385:5016..5177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2385 5017..5177 +
1622929680.6563697-CDS-H-paniculata_contig2385:5807..62071622929680.6563697-CDS-H-paniculata_contig2385:5807..6207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2385 5808..6207 +
1691480964.718194-CDS-H-paniculata_contig2385:5807..62071691480964.718194-CDS-H-paniculata_contig2385:5807..6207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2385 5808..6207 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2385.6448.1

>prot_H-paniculata_contig2385.6448.1 ID=prot_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAEL
DRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQARN
GSNSLPGSSAGAGIGRSNPAGQPVNNSAQDGDKFVFVGIPLGTGRKKRGL
LSGRAKDDNGDADDDDSSKKATNKKSKHNVSRSHKK*
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mRNA from alignment at H-paniculata_contig2385:4346..8785+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2385.6448.1 ID=mRNA_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4440bp|location=Sequence derived from alignment at H-paniculata_contig2385:4346..8785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGCGAAGAGACGAGTGGCATAGAAACCTTGAAGAATTTTGAGCGCGC
GCTTGGACACGTGCGTAACAGGTACTGACGATCCCTGTCCAAGTGTGGTG
CGGCTGTACAGTGTACCAATACCAATAAAGAGTAGGTAGTCCTGGTGCGG
AGAGCTATCGGATGTGTTGATGAATGATGCTGCAGGGATTCACGTGATGT
TACGGTCTTCATGCGCTGATAGACCTATGTGCAGCATGAAAGTGTGTATG
GCTTTATTAGAAAAGCCTTCGTGATTTGGTGTGGAAGCGATAGCTTTACT
CTATCATAAGAGAAAGTACTTGGAATTTGACATGGATGCTCTGTCGCCTA
CACCATAAAGAACAATCGGACACCACAGGTACATGGCGTCTATTTAGGTC
CATATTCGACAACGTTCTACGTGCCGATGCCAGGTGCACAGGCTACACAC
ACTCCATGGCCTCGTTTACCGCTTTCCTGACTCTAGTTGATGGAATGCAG
CATCTTATATATATTACTGCACCATCGTCCTCAATACGTGTTCCCCCGCA
CAAGTGTTTCGTGGAGAGGTCCGGCACGTGCCGCCGTTCCCCCCCCCGAT
ATCCTTATCCTCGTCCTCCAATACACGCACCAATCGTTATTTTGACCGTC
AGCGTTAGGCCGCTGACGCTTATGAGCCGGGAGGAAGTCGGTGCTTGCGT
TAGCCCTGCCGACCGTGCCAAGCTAAACCTACAGATGGCCTATGGCGTCA
CGTCCCTGTTCTACATGTTTTTGAAGACCCAGGGCGTGTCACCCTCGAAC
CATCCCGTCAAAGCAGAACTTGATCGGATAAAGTGAGTTTTTTCCTATCG
CCATAGCTGACACTATATTTACTTTCTTGTGCTCATGCAGACTCGATACG
AGGCTCGCTATCGCATCACATTGTCACAACAGACAGTGCGGTGCGGTGCG
GTCCGGTGGTAGATAGCACGCATCTACTGTGTGTGTTTGTGGCTTGTCGT
CTGCATATTGATATTGGTACATTGACTACAGACAGGTAACTTCAACGAAT
ATCGTTGAGAGCCAAAATAAGCAGGTTGGATAGCATTTGACCCAAGTAGG
TATTATGAGACTTGGAAGATACCAACCAATGACGATACTTTTGTCAGACG
TTAGCTTAATATGTTCACTTGTATTTCCTAGAATCAGAAGATAAATGTGA
CCTGCGAGTTGACCTCCTCCGTTTCTATGATAAGCGAGAAATTCCGCTCT
CTGCGTCAGTCGCCGGAGCTAATTCAGTTCCTTTCTAACTTTTGCACAAC
CAAAATCGGTTCACCCCGCACATATATCCCCTCCCTCGTTGTTTTTTGTA
CCTCTTAGGAGCGTTTGTTTTCATTATACCTGTTCTGATAATTCACTTAC
CCTCTACGTACGTCCTTGACAATTGTCGCGTAACACATGGGGTGGACTAT
GATGATGCGAAGAGGGTACTTCGGACGTCTTCAAAAGGTGGGCAAGCCGC
CGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCGACGCTTCATC
AACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGCAGGCCCGAAA
CGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGTATTGGACGTA
GTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGATGGAGACAAG
TTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGAAACGAGGATT
GCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGATGATGATGACT
CTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGTGTCGCGATCG
CATAAGAAATGATTTACCTGGCATTCGTGTATACATTATGGCTTCAAATT
TGCCGGGGGGCGGTGATCGGTGTAGAGCTCAAATCTTGACTCCTTTGGGG
CGCCATTATGACGAGAACACTTATCTCGCGGCTTTAACCCTTCGCGCAGG
TGTTGTGTGTATGTTCAAACGTTCGTACAGGGCCCGTTACCACAGGAGTT
AAGAGGCCAAGTGTTGCAGTCGTTGCGTGGCACCATGCTAACTCCCTATT
TGTGCTGTATTTTTTGTTCGGACTGGCTGTCTGAACGATAGCGACTCTCT
CCCATGACCACTTCATACACCTTATTCCCTGATTTTCAGGTGGGCGTTGG
GTGGTTAAGTGGAAGCCGGCACATAACGAGTTGATTGCTACACACGTAGT
CAGAGGGTACCTTGTGGGTACCTTGTTGCGGATATCACAATGTACCCACA
TTGCGGTGAAGTTGACATTGGGCATAATTTGTTTTATGACGTTGTGTGTA
CACTGTCAACCTCACCACAGCTTGGACGTTGGGATATCCGCAACAAGGTA
CGCCTCTGGCCACGGTTCTATCGGTGCACTATGTTGCTGTCATAATGCCC
CCCATTCATGAAATATTGGTCATACGGATGTTGTTTGTCCATTCTAAGGA
TTTGATGTGGGGTCCAGTCTAGAATCAGCGAGATTTGAAAACGGGAAAAT
CTTTAGAATCTTCTCGGTAGTAATACTAAGGGAAAACATTGCTGTATTGC
ACGGAATTCGGTATTGGCTACCGATACTGTGAAAAAGTCGTCTTCCCGTT
AACGGTCACCATGCATGGTACAGCCAAACATAATTATCACGGCGTCAGTG
ACATTTCCCGTTTACCGTACCCTGAAACCTCGTTACGGTACTGATGCTGT
GCCTTCAAACTAAAAACTTTATAAGTCGTTAAAGCGAGCTCTCGGAATGA
GAGAGTTACCTCCTTGTGGGACTCCCCGTACACATCATATACTACGCACA
TGGTTATATAGCAGTATTGTATAACTTGCGCTTGAGCAAAGCTTGGGCAC
CTAAATACTGTGCCAAATATTGATACCTTACCGCATAATGCCGAAAAGAC
GAAAACTATACCGTACCACGCGCGGGGAAACAACCGAATACCTCTTACCC
CACAAATATCGAAAAATCTGTATACCGTACCGTGCCGTGCTACCGATATA
CCGAATATCGAGTACTGACATGATACCGAAAAAGTAGTTTTACCGTTCTG
TTTATTCTTTTTCACAAAACCACTATCGAGAACACCCCTGAAAAACCTTG
CTGCGAACGAAATACCAAATTCGAAGGAATGCCAAGACTGTATTTGCAGA
CATTATCCAAAGTAATCACATAGGAAAAATGACACAGCTCTTGAGTGAAA
CAACAAAGAAGCGAAAAATGATGACCATGAAAACAACAAAAGGAATATGA
CGTATAACAACATCCTAACCATTTGATCGGCTATGATCGGTCACACCTCA
TTATTGGTTGCGACCGTAGTTTATGATACTTTCATTCGACCGATTCACCC
ATGCAGGCATCCAATTGGTGTGGCACCCCCGGTGAAAAATGCAGAAGTTC
TTAAGGGGGCCTAATCCAAGCCCTTTTTTGTGTGTAAATTGTCGACGTAT
GCACACACGGTGAAGATACTCCGCCAATATTAGTGTGTATACGTCATCGA
ATTTCCAAGCCATTCGCAACAAACACTACAACTCATCGAGTCGTATACAC
ATCGTAAACACACTCCGCCCCCGGTGCCTGCAAAACAACACAAAAAAGAG
GCTACCATCAATCGGCTAAAGCGACAAGAACTCCAGTATTCTTTCCTGCG
AAGACATGCACGTAGGAACGGACAGGCAGACGTAGGCATAAACGTGAACC
AAACTCCGTTTCTATGTTACTCCGGCCTATGATGCCGTTCAAAATCTGCA
CACAGACACCCAGCAGCCGCGCAACTGAGGCTTTATTCTCACACACCTAC
AAGTCTCGATTTCTACAAAAAAAGAAAAGCTTTCCCGTGTACGGCGATCG
CTTTTGGGGTAATGCAGTCGCTAAATCCACGCTGAGCCTACATCGAACAT
GCAACCTGGATAGGATGCCTACTCTACAGTTGAACTAGCAGAGAGAATGA
AGATGCCTGCAGTTTTCATGTCATATTTTCACATTATAATCCTATCGAAT
GATAACAGTCGTCTATGGCGAAGATTACCTTCAGACAAATTGACTTCATC
GATCGATCATGGTTTTTCGGCCACTCGGGTCATTCCTTGAAAAAAAATCT
CACCGAGAACAAAAAGTACTATTTCTCAGGTCATTCCTTGAAAAAAAAAC
TCACCAAGAAACAAAAGCACTGCTATCTTCGTCTCTTTCTACTGTCAACG
GTCGAGTATCCGACGTCCAACCCTTCACAAAGGATCCTTAGGTCGCATCG
ACTAATTTATCAAAAGCTGCCGAATGCGCTAACGCTACAAATAAACATTA
ATTTGTCGAAAATCTTCCACTGCGTGTACCATACGTCATCATCTACTACT
TGCCATCTTACTCGTTAAAGGTCGACTCTCGGTCTGATGG
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Coding sequence (CDS) from alignment at H-paniculata_contig2385:4346..8785+

>mRNA_H-paniculata_contig2385.6448.1 ID=mRNA_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig2385:4346..8785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCCGGGAGGAAGTCGGTGCTTGCGTTAGCCCTGCCGACCGTGCCAA
GCTAAACCTACAGATGGCCTATGGCGTCACGTCCCTGTTCTACATGTTTT
TGAAGACCCAGGGCGTGTCACCCTCGAACCATCCCGTCAAAGCAGAACTT
GATCGGATAAAATGAGCCGGGAGGAAGTCGGTGCTTGCGTTAGCCCTGCC
GACCGTGCCAAGCTAAACCTACAGATGGCCTATGGCGTCACGTCCCTGTT
CTACATGTTTTTGAAGACCCAGGGCGTGTCACCCTCGAACCATCCCGTCA
AAGCAGAACTTGATCGGATAAAAGGGTACTTCGGACGTCTTCAAAAGGTG
GGCAAGCCGCCGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCG
ACGCTTCATCAACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGC
AGGCCCGAAACGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGT
ATTGGACGTAGTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGA
TGGAGACAAGTTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGA
AACGAGGATTGCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGAT
GATGATGACTCTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGT
GTCGCGATCGCATAAGAAATGAAGGGTACTTCGGACGTCTTCAAAAGGTG
GGCAAGCCGCCGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCG
ACGCTTCATCAACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGC
AGGCCCGAAACGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGT
ATTGGACGTAGTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGA
TGGAGACAAGTTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGA
AACGAGGATTGCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGAT
GATGATGACTCTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGT
GTCGCGATCGCATAAGAAATGA
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