mRNA_H-paniculata_contig23786.6430.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.550e-42 Identity = 79/146 (54.11%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 7 ICAVSRPNASCDFDGKIGIWRICVIKQAQRSSTR-------------------RERG----QQYEFDVTIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDL 375
I A +RP+ + DFDGKIGIWRICVI+ AQRSS + R R ++YEFD TIDAEWY++WY D LPA+KEKMPWL + V+ Q+D A+PHTGK P LN G W LVTQPAQSPDLNINDL
Sbjct: 197 IVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDL 342
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI001C25717E (uncharacterized protein LOC121804947 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25717E) HSP 1 Score: 73.2 bits (178), Expect = 8.390e-13 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 1 IFICAVSRPNASCD----FDGKIGIWRICVIKQAQRSSTRRERGQ-QYEFDVTIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+F+ AVSRP D FDGKIGI+ A+R S R RG + + +++ E +E + +PA+K K P +E+ Q+D ATPH ++ + L + F+L++QP SPD N+ DL+F
Sbjct: 101 MFMGAVSRPQFGTDGKTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLEIKPIPSVNKEAMRECLLNQIIPAIKAKWPANASKEIYIQQDNATPHLN-SSDSQFEALSSSDGFKFHLISQPVNSPDTNLLDLDF 231
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3) HSP 1 Score: 73.2 bits (178), Expect = 1.440e-12 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 1 IFICAVSRP----NASCDFDGKIGIWRICVIKQAQRSSTRRERGQ-QYEFDVTIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+F+ AV+RP + +C FDGKIGI+ + A RS R RG + + +I ++ + +PA+K K P ++ Q+D A PH NT E+ + +N L QPA SPDLNINDL F
Sbjct: 226 MFMSAVARPRYDADGNCTFDGKIGIFPFTFDEPAARSIKNRARGVIEVKPIESITKVVIKQCLLEKIIPAIKAKWPLDCNRPIVIQQDNARPHIC-NTDLDFIEVAKSDGFNITLANQPANSPDLNINDLGF 356
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI000E70440D (uncharacterized protein LOC113337402 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E70440D) HSP 1 Score: 68.9 bits (167), Expect = 2.100e-11 Identity = 50/139 (35.97%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 1 IFICAVSRPN----ASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDVTIDAEWYQEWYK--------DSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+F+ AV+RP + FDGKIGIW + AQR+S R G TI+ + K + LPA+K+K P +G + Q+D A PH T R+ E R + + QPA SPDLN NDL F
Sbjct: 99 MFLSAVARPRFDAAGNVIFDGKIGIWAFVFMVAAQRTSKNRVAG-------TIEMRPMKSVTKIVTRSFLIEKLLPAIKQKWPH-DGSTIFVQQDNAKPHISI-TDREFCEAVRQSGMDVQMCFQPANSPDLNTNDLGF 228
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI00053FA15F (uncharacterized protein LOC104905014 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FA15F) HSP 1 Score: 68.6 bits (166), Expect = 6.060e-11 Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 1 IFICAVSRP----NASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDV-TIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+F+ AV+RP + SC FDGKIGIW AQRSS R RG + I + ++ + +PA++EK P + + Q+D A H + P G ++F L+ QP SPD+NI DL +
Sbjct: 232 MFMAAVARPRWNQDGSCAFDGKIGIWPFTKQVPAQRSSDNRPRGTLETKPIDAITKDVIRDMLVNKIMPAIREKWPNDLSKVIYIQQDNAPCHINNDDPVFQQHRLLHG-FDFRLIQQPPNSPDMNILDLGY 362
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.560e-10 Identity = 49/135 (36.30%), Postives = 66/135 (48.89%), Query Frame = 1
Query: 1 IFICAVSRPN----ASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDVTIDAEWYQEWYKDSFLPALKEKMP--WLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEFSA 387
+F+ AV RP S FDGK+GI+ + A+RSS + +G T+ + Y + + LPA+ K P W + + Q+D A PH P + G N LVTQPA SPDLNI DL F A
Sbjct: 192 MFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRW---KTLYIQQDGARPHCTDGCPELVASAASFG-LNIKLVTQPANSPDLNILDLGFFA 322
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI00053F43DC (uncharacterized protein LOC104894846 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F43DC) HSP 1 Score: 66.6 bits (161), Expect = 2.850e-10 Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 1 IFICAVSRP----NASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDV-TIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+FI AV+RP + SC F+GKIGIW AQR S R RG + I + ++ +PA++EK P + + Q+D A H + P DG ++F L+ QP SPD+N DL +
Sbjct: 226 MFIAAVARPRWNQDGSCAFNGKIGIWAFTKQVPAQRRSNNRPRGTLETKPIEAITKDVIRDMLVHKIMPAIREKWPDDLSKVIYIQQDNAPAHITNDDPIFQQHRLLDG-FDFRLIQQPPNSPDMNCLDLGY 356
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI00053F84DB (uncharacterized protein LOC104906780 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F84DB) HSP 1 Score: 66.2 bits (160), Expect = 3.970e-10 Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 1 IFICAVSRPN----ASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDV-TIDAEWYQEWYKDSFLPALKEKMPWLEGEEVI-AQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEF 381
+F V+RP C FDGKIGI+ + A+R+S RE+G V +++ + ++ + +PA+KEK P G I Q+D A H P +DG +NF L+ QP SPDLNI DL F
Sbjct: 270 MFTACVARPRYNSAGECTFDGKIGIFPFTYQEPAKRTSKNREKGTMITKVVESVNQKVTRDMLINEIIPAIKEKWPRDGGPTTIFIQQDNAKAHITHEDPEWQLIHEQDG-FNFILIQQPPNSPDLNILDLGF 401
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: A0A392MLK4_9FABA (Transposase n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MLK4_9FABA) HSP 1 Score: 65.5 bits (158), Expect = 4.560e-10 Identity = 47/135 (34.81%), Postives = 70/135 (51.85%), Query Frame = 1
Query: 1 IFICAVSRPNASCDFD----GKIGIWRICVIKQAQRSSTRRERGQQYEFDVT-IDAEWYQEWYKDSFLPALKEKMPWLEGEEVI-AQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDLEFSA 387
+F+ A++RP +F+ GKIG++ + A+RSS R G +T I E + + + LPA+KEK P E I Q+D A H + + +G ++F L+ QPA SPDLNI DL FS+
Sbjct: 59 MFLVAIARPRFDDEFNVTFTGKIGLFPLVEKVPAKRSSANRVAGTLETKPITSITKEVSRMFLINKVLPAIKEKWPREHAHETIFIQQDNAPCHVSPDD-EEFRRAASEGGFDFRLICQPANSPDLNILDLGFSS 192
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B) HSP 1 Score: 65.9 bits (159), Expect = 5.260e-10 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 1
Query: 1 IFICAVSRP----NASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDV-TIDAEWYQEWYKDSFLPALKEKMPWLEGEEVIAQKDEATPHTGKNTPRKLNELGRDGEWNFNLVTQPAQSPDLNINDL 375
+F+CAV+RP N FDGKIGI+ A+R+S R G + +I E ++ + +PA+ EK P + + Q+D A PH + P ++G +N +V QP SPD N+NDL
Sbjct: 202 MFMCAVTRPLFSDNGEVLFDGKIGIFPFTEQVPAKRNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNG-FNIQIVQQPPNSPDTNVNDL 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23786.6430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23786.6430.1 >prot_H-paniculata_contig23786.6430.1 ID=prot_H-paniculata_contig23786.6430.1|Name=mRNA_H-paniculata_contig23786.6430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp IFICAVSRPNASCDFDGKIGIWRICVIKQAQRSSTRRERGQQYEFDVTIDback to top mRNA from alignment at H-paniculata_contig23786:2287..2673- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23786.6430.1 ID=mRNA_H-paniculata_contig23786.6430.1|Name=mRNA_H-paniculata_contig23786.6430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=387bp|location=Sequence derived from alignment at H-paniculata_contig23786:2287..2673- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23786:2287..2673- >mRNA_H-paniculata_contig23786.6430.1 ID=mRNA_H-paniculata_contig23786.6430.1|Name=mRNA_H-paniculata_contig23786.6430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig23786:2287..2673- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |