mRNA_H-paniculata_contig2374.6419.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: A0A6P8QU01_GEOSA (Centrosomal protein of 76 kDa n=8 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8QU01_GEOSA) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-20 Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+EL+L+ L+++ R + GL+TIWDD++ YLL PA+ AYE ER +G+S GN++FQDAI+ AVPDKH FKG+P F
Sbjct: 550 IELQLRVLVSEHRKDL-GLTTIWDDQLSYLLSPALAAYETERTTGISAGNEEFQDAIRRAVPDKHTFKGFPIHF 622
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: A0A1S3I7T6_LINUN (centrosomal protein of 76 kDa n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I7T6_LINUN) HSP 1 Score: 93.2 bits (230), Expect = 1.910e-20 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+ELEL+ L+ + R ++GL+T WDD+M YLL PA+ AYE ER++GV GN+DFQDA++ AVPD H FKGYP F
Sbjct: 530 LELELRALVTEHRR-EQGLNTSWDDQMSYLLTPALAAYETERLTGVPAGNEDFQDAVRRAVPDGHTFKGYPVQF 602
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: A0A6G1RLY1_9GRUI (Centrosomal protein 76 (Fragment) n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1RLY1_9GRUI) HSP 1 Score: 89.0 bits (219), Expect = 4.170e-20 Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+EL+L+ L+++ R + GLST+WDD++ YLL PA+ AYE ER + VS GN++FQDA++ AVPD H FKG+P F
Sbjct: 96 IELQLRILVSEHRKDL-GLSTVWDDQLSYLLSPALAAYELERTTSVSAGNEEFQDAVRRAVPDGHTFKGFPIHF 168
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: G1KNT5_ANOCA (Centrosomal protein of 76 kDa n=7 Tax=Toxicofera TaxID=1329911 RepID=G1KNT5_ANOCA) HSP 1 Score: 91.3 bits (225), Expect = 7.760e-20 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+EL+L+ L+A+ R + GL+T+WDD++ YLL PA+ AYE ER +GVS GN++FQDAI+ AVPD H FKG+P F
Sbjct: 351 LELQLRILVAEHRKDL-GLATVWDDQLSYLLSPALAAYELERTTGVSSGNEEFQDAIRRAVPDGHTFKGFPIHF 423
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 8.880e-20 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDK 192
+E E+K +A WR K G T+WDD +GYLLGPAVFAYEQER+ G S G D+FQDA+QGAVPD+
Sbjct: 510 VESEVKRRVAAWREGK-GWPTVWDDALGYLLGPAVFAYEQERLCGASFGGDNFQDAVQGAVPDR 572
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: A0A2T7NGY0_POMCA (Centrosomal protein of 76 kDa n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NGY0_POMCA) HSP 1 Score: 91.3 bits (225), Expect = 9.080e-20 Identity = 39/74 (52.70%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+E++L+ L+A+ R ++ GL+T+WDD++ Y+L PA+ AYE ERV+GV+ GN++FQDA++ AVP+ H FKGYP F
Sbjct: 525 LEVQLRKLVAQHRQDQ-GLTTLWDDQLSYILTPALAAYETERVTGVTAGNEEFQDAVRQAVPEGHTFKGYPIQF 597
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: UPI001BF3ADBF (centrosomal protein of 76 kDa isoform X1 n=4 Tax=Alosa TaxID=34772 RepID=UPI001BF3ADBF) HSP 1 Score: 90.9 bits (224), Expect = 1.240e-19 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
MELEL+ L+A+ R + GL+TIWDD + YLL A+ AYE ER +GVS GN++FQDAI+ AVPD H FKG+P F
Sbjct: 523 MELELRHLLAEHRKDL-GLATIWDDNLSYLLSAALVAYELERCTGVSCGNEEFQDAIRRAVPDGHTFKGFPIQF 595
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: UPI001B7EE234 (centrosomal protein of 76 kDa isoform X1 n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EE234) HSP 1 Score: 90.9 bits (224), Expect = 1.240e-19 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+ELE+++++++ R + GL+T+WDD + YLL PA+ AYE ER +G+S GN++FQDAI+ AVPD H FKG+P F
Sbjct: 532 IELEIRNMVSEHRKDL-GLATVWDDHLSYLLSPALSAYEMERTTGISCGNEEFQDAIRRAVPDGHTFKGFPIHF 604
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: UPI0008550536 (centrosomal protein of 76 kDa isoform X2 n=2 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008550536) HSP 1 Score: 90.5 bits (223), Expect = 1.690e-19 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+EL+L+ L+++ R + GL+T+W+D++ YLL PA+ AYE ER +G+S GN++FQDAIQ AVPD H FKG+P F
Sbjct: 529 IELQLRVLVSEHRKDL-GLATVWEDQLSYLLSPALAAYEMERCTGISAGNEEFQDAIQRAVPDGHTFKGFPIHF 601
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Match: A0A8C5X2J7_9PASS (Centrosomal protein of 76 kDa n=2 Tax=Neognathae TaxID=8825 RepID=A0A8C5X2J7_9PASS) HSP 1 Score: 90.1 bits (222), Expect = 2.010e-19 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNDDFQDAIQGAVPDKHCFKGYPSCF 222
+E++L+ L++++R + G ST+WDD++ YLL PA+ AYE ER +GVS GN++FQDA++ AVPD H FKG+P F
Sbjct: 351 IEVQLRILVSEYRKDL-GFSTVWDDQLSYLLSPALAAYELERTTGVSAGNEEFQDAVRRAVPDGHTFKGFPIHF 423 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2374.6419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2374.6419.1 >prot_H-paniculata_contig2374.6419.1 ID=prot_H-paniculata_contig2374.6419.1|Name=mRNA_H-paniculata_contig2374.6419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp MELELKDLIAKWRNNKKGLSTIWDDEMGYLLGPAVFAYEQERVSGVSVGNback to top mRNA from alignment at H-paniculata_contig2374:1533..4793+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2374.6419.1 ID=mRNA_H-paniculata_contig2374.6419.1|Name=mRNA_H-paniculata_contig2374.6419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3261bp|location=Sequence derived from alignment at H-paniculata_contig2374:1533..4793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2374:1533..4793+ >mRNA_H-paniculata_contig2374.6419.1 ID=mRNA_H-paniculata_contig2374.6419.1|Name=mRNA_H-paniculata_contig2374.6419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig2374:1533..4793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |