mRNA_H-paniculata_contig23709.6408.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig23709.6408.1
Unique NamemRNA_H-paniculata_contig23709.6408.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.320e-95
Identity = 175/299 (58.53%), Postives = 212/299 (70.90%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPLLKGPPQDPNSWRILHDALA----AQLGTHRAMTVEARVQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            P +LP +A VP G ++L   +++RPSLL  AI ++TN A+ +APCVL GM G GK+VLASAVVRD +VR+HF AG+FW+R  ++AK+ LHA L G  L +A+      P L S+E+VTR+L AV A S   RLVVLDDVWE E+VDAL+ TGLQLLVTTRDR+VVSMPG  VEVG+MEE+EALEVLRVGCGA + +ELPR EALQ                        GPPQDP SWR LH+AL+     +LGT R M V  RV AVLE S GAMADDP +Q+RC+FLAVLAPGTLAP
Sbjct:  208 PPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ------------------------GPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAP 481          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 7.250e-79
Identity = 152/291 (52.23%), Postives = 189/291 (64.95%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPLLKGPPQDPNSWRILHDALAAQLGTHRAMTVEARVQAVLETSFGAMADDPRRQERCVFLAVLAPG 870
            P +LP +A VP G ++L   +++RPSLL  AI ++TN A+ +APCVL GM G GK+VLASAVV+  +VR+HF AG++W+R  ++AK+ LHA L GL L +A+      P L S+E+VTR+L AV A S   RL+VLDDVWE EVVD L+ TGLQLLVTTRDR+VVSMPG  VEVG+ME+ EALE+LRVGCGA + +ELPR E LQV     VDCG                                     R MTV  RV AVLE S GAMA+DP +Q RC+FLA  APG
Sbjct:  189 PPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQVV----VDCGN-----------------------------------DRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA--APG 436          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 3.980e-71
Identity = 128/205 (62.44%), Postives = 161/205 (78.54%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 612
            P +LP++A VP GA++L  ++V+RP +LE AI ++TN A  +APCVL GM GGGK+VLASAVVRD +VR+HF AGIFW RVG+ +K+ LH  L GLVL +A+     PP L S+E+VT +L A  A +   RLVVLDDVWE EVV+ALQ T LQLLVTTRDR+VVSMPG  +EVG+MEE+EALEVLRVGCGA + +ELPR++ALQ
Sbjct:  399 PPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 6.250e-57
Identity = 135/298 (45.30%), Postives = 179/298 (60.07%), Query Frame = 1
Query:   19 LADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKE----FPPQLESLEDVTRHL-TAVGAKSPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPL--LKGPPQDPNSWRIL---HDALAAQLGTHRAMTVEARVQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            +A VP GA+TL +SYV R ++ E A   +  P    AP  + GMGGGGKT+L SAVVR + VR+HFR G+FW+RVG++AK  L +LL+GL  E++A   +     P  LESLE V +HL T   A +  RLVVLDDVWE EVVDAL   GL++LVTTRDR+VV + GG +E+G+M E EALE+L       RTV  P  E     + V V CG L L L +A  +  +KG      +W  L    + +A ++      +   +V  VL TSF A+A   R+QE  + + VLA G LAP
Sbjct:    1 MAAVPAGALTLPQSYVERAAVQEVA-DGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL---LKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKV--VLGTSFDALA--ARKQEESLKMTVLAAGALAP 290          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 9.510e-56
Identity = 137/297 (46.13%), Postives = 178/297 (59.93%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLG-KSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFPPQ----LESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPL--LKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLA 864
            P SLP++A VP GA+ L   SYV R ++ E A   +T+P    AP  + GMGGGGK+VLASAVVR   VR+HFR GIFW+RVG+ AK  L ALL+GL  E+ A   + P      L+ LE V +HL AV +     RLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P G +EVG+M E EALE+LR   GA   V  P  +     + V   CG L L L +A  +  +KG      +W+ L + L       RA   ++  + AVLETSF ++A   R+QE  + LAVLA
Sbjct:  199 PPSLPDMAAVPAGALELPCSSYVERAAVQEVA-DGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGA---VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLA--VRKQEEFLKLAVLA 489          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 3.330e-54
Identity = 137/304 (45.07%), Postives = 180/304 (59.21%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTL-GKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKE----FPPQLESLEDVTRHLTAVGAK--SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPL--LKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            P SLP++A VP GA+ L   SYV R ++ E A   +T P    AP  + GMGGGGK+VLASA VR   VR+HFR GIFW+RVG+ AK  L ALL+GL  ++ A   +     P  L+ LE V +HL AV +   SP RLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P G +E+G+M E EALE+LR   G   TV  P  +     + V   CG L L L +A  +  ++G      +W  L   L       RA   ++  ++ VLETSF ++A   R+QE  + +AVLA G LAP
Sbjct:  253 PPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSP-RLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSG---TVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAP 549          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 3.400e-54
Identity = 135/303 (44.55%), Postives = 185/303 (61.06%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLG-KSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKE----FPPQLESLEDVTRHLTAVGA-KSPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPL--LKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            P SLP++A+VPVGA+ L   SYV R ++ E A   +TNP     P  + G+GGGGK+VLASAVVR   VR+HFR GI W+RVG+ AK  L  LL+GL  E+ A   +     P  L+SLE V +HL AV + ++  RLVVLDDVWE EVVDA    G +LL+TTRDR++V  P G +E+G+M E EALE+LR   G   TV+      +++T +VA+ CG L L L +A  +  +KG      +W  L           RA   ++  ++ VLET+F ++A   R+Q+  + +AVLA G LAP
Sbjct:   38 PPSLPDMAEVPVGALELPHSSYVERAAVQEVA-DGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSG---TVDPGDDVRMKMTKVVAL-CGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLAT--RKQKEFLMMAVLAAGALAP 333          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 4.700e-54
Identity = 137/303 (45.21%), Postives = 183/303 (60.40%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTL-GKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFP---PQ-LESLEDVTRHLTAVGAK-SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAAPL--LKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            P SLP++A VP GA+ L   SYV R ++ E A   +T P    AP  + GMGGGGK+VLASAVVR   VR+HFR GIFW+RVG+ AK  L ALL+GL  ++ A   + P   P+ L+SLE V +HL AV +  +  RLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P G +E+G++ E EALE+LR   GA   V  P  +     + V   CG L L L +A  +  ++G      +W  L   L       RA   ++  ++ VLETSF ++A   R+QE  + +AVLA G LAP
Sbjct:  236 PPSLPDMAAVPAGALELPSSSYVERAAVQEVA-DGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGA---VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAP 532          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 5.710e-54
Identity = 135/302 (44.70%), Postives = 175/302 (57.95%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKE----FPPQLESLEDVTRHLTAVGAK--SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAA--PLLKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLAPGTLA 879
            P SLP++A VP  AV L  S     + +      +TNP    AP  + GMGGGGK+VLASAVVR + VR+HFR GIFWL VG+ AK+ L  LL+GL  ++ A   +     P  L+SLE V RHL AV +   SP RLVVLDDVWE EVVDAL   G ++LVTTRDR+VV +P   +E+G+M E EALE+L    G   TV  P      V + V   CG+L L L +A   P++KG      +W  L D L   +    A   ++  +  VLETSF A+    R+++     AVLAPG +A
Sbjct:  130 PPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSP-RLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSG---TVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF--RKKQAFKKTAVLAPGAVA 425          
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 6.870e-53
Identity = 131/302 (43.38%), Postives = 181/302 (59.93%), Query Frame = 1
Query:    1 PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLELAARDKEFP---PQL-ESLEDVTRHLTAVGAK-SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQVTSLVAVDCGKLALALDLAA--PLLKGPPQDPNSWRILHDALAAQLGTHRAMTVEAR-VQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP 882
            P +LP+ A VP GA+ L +SYV RP + E A+  + +P    AP ++ GMGGGGKTVLASA+VR + V +HFR GIFW+ +G+ A + L   L+GL  E+ A   + P   P + +SLE V +HL AV ++ S  RLVVLDDVWE EVV A    GL++LVTTRDR++V +PGG +E+G+M E+EALE+L    G   TV  P        + V   CG+L L L +A   P++KG      +W  L +              E+R +  VL  SF A+A   R++E  + +AVLAPG +AP
Sbjct:  231 PPTLPQRAAVPTGALALPRSYVERPGVQE-AMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSG---TVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALA--ARKREEFLRMAVLAPGAVAP 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23709.6408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W2_ECTSI1.320e-9558.53NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE7.250e-7952.23NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KF10_9PHAE3.980e-7162.44NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE6.250e-5745.30NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KXS7_9PHAE9.510e-5646.13NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI3.330e-5445.07NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI3.400e-5444.55NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI4.700e-5445.21NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE5.710e-5444.70NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI6.870e-5343.38NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23709contigH-paniculata_contig23709:3..1092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.9
Seed ortholog evalue2.4e-84
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size882
Cds size882
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929675.1286733-CDS-H-paniculata_contig23709:2..2601622929675.1286733-CDS-H-paniculata_contig23709:2..260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23709 3..260 -
1691480962.0715308-CDS-H-paniculata_contig23709:2..2601691480962.0715308-CDS-H-paniculata_contig23709:2..260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23709 3..260 -
1622929675.145072-CDS-H-paniculata_contig23709:468..10921622929675.145072-CDS-H-paniculata_contig23709:468..1092Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23709 469..1092 -
1691480962.0831137-CDS-H-paniculata_contig23709:468..10921691480962.0831137-CDS-H-paniculata_contig23709:468..1092Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23709 469..1092 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23709.6408.1prot_H-paniculata_contig23709.6408.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig23709 3..1092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig23709.6408.1

>prot_H-paniculata_contig23709.6408.1 ID=prot_H-paniculata_contig23709.6408.1|Name=mRNA_H-paniculata_contig23709.6408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
PASLPELADVPVGAVTLGKSYVTRPSLLESAISHVTNPALVNAPCVLAGM
GGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHALLRGLVLEL
AARDKEFPPQLESLEDVTRHLTAVGAKSPLRLVVLDDVWEGEVVDALQHT
GLQLLVTTRDRAVVSMPGGSVEVGNMEENEALEVLRVGCGAFRTVELPRV
EALQVTSLVAVDCGKLALALDLAAPLLKGPPQDPNSWRILHDALAAQLGT
HRAMTVEARVQAVLETSFGAMADDPRRQERCVFLAVLAPGTLAP
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mRNA from alignment at H-paniculata_contig23709:3..1092-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig23709.6408.1 ID=mRNA_H-paniculata_contig23709.6408.1|Name=mRNA_H-paniculata_contig23709.6408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1090bp|location=Sequence derived from alignment at H-paniculata_contig23709:3..1092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAGCAAGTCTACCGGAACTGGCTGACGTACCTGTAGGCGCGGTCACCCT AGGTAAATCATACGTGACGCGACCTTCGTTACTCGAGAGCGCCATCAGCC ACGTCACGAATCCGGCCTTGGTCAATGCTCCCTGTGTGCTTGCCGGCATG GGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACGGGATACGAG GGTTCGGAAGCACTTTCGTGCGGGAATATTTTGGCTGAGGGTGGGACAAA ACGCTAAGGAAGATCTTCATGCTTTGTTGCGAGGGCTGGTCTTGGAGTTG GCGGCAAGGGATAAGGAATTTCCTCCCCAGCTCGAAAGCTTGGAAGACGT GACGCGTCACCTAACTGCAGTTGGTGCGAAAAGCCCACTGCGCTTGGTCG TGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATGCTCTACAACACACG GGGTTGCAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGTATCTATGCC AGGAGGGTCCGTTGAGGTAGGGAATATGGAGGAGAACGAGGCGCTGGAGG TTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGTTGAACTTCCGCGAGTG GAAGCATTGCAGGTGACAAGTCTGGTCTTGTGTGTTGATTTCTGGTGGCG GACAGATCCTAATACCTGTAATATCATACCTTGTAGCACATATTTGGGAA GACAGCTTGGTGCCTCGGACAGCGTTCGTGTATCCACTCTAATTATTCGG CTGTTGGTCGTTTTGCAGTTGTTCCCAGGATCCAGGTTACGGTTGATCGC ACTTGACACAAACGTCCACCTCGTCGTTCCAGGTCGCCGTTGACTGTGGG AAGCTGGCTCTCGCGCTTGACCTCGCCGCGCCGCTGCTAAAGGGCCCTCC ACAAGATCCGAACTCTTGGCGCATTTTACATGATGCTCTGGCAGCGCAAT TGGGGACGCACCGTGCCATGACTGTAGAAGCACGTGTGCAAGCTGTCCTT GAGACAAGCTTCGGTGCCATGGCAGATGACCCCCGCAGGCAGGAGAGATG CGTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCACCG
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Coding sequence (CDS) from alignment at H-paniculata_contig23709:3..1092-

>mRNA_H-paniculata_contig23709.6408.1 ID=mRNA_H-paniculata_contig23709.6408.1|Name=mRNA_H-paniculata_contig23709.6408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1764bp|location=Sequence derived from alignment at H-paniculata_contig23709:3..1092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAGCAAGTCTACCGGAACTGGCTGACGTACCTGTAGGCGCGGTCACCCT
AGGTAAATCATACGTGACGCGACCTTCGTTACTCGAGAGCGCCATCAGCC
ACGTCACGAATCCGGCCTTGGTCAATGCTCCCTGTGTGCTTGCCGGCATG
GGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACGGGATACGAG
GGTTCGGAAGCACTTTCGTGCGGGAATATTTTGGCTGAGGGTGGGACAAA
ACGCTAAGGAAGATCTTCATGCTTTGTTGCGAGGGCTGGTCTTGGAGTTG
GCGGCAAGGGATAAGGAATTTCCTCCCCAGCTCGAAAGCTTGGAAGACGT
GACGCGTCACCTAACTGCAGTTGGTGCGAAAAGCCCACTGCGCTTGGTCG
TGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATGCTCTACAACACACG
GGGTTGCAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGTATCTATGCC
AGGAGGGTCCGTTGAGGTAGGGAATATGGAGGAGAACGAGGCGCTGGAGG
TTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGTTGAACTTCCGCGAGTG
GAAGCATTGCAGGTGACAAGTCTGCCAGCAAGTCTACCGGAACTGGCTGA
CGTACCTGTAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTT
CGTTACTCGAGAGCGCCATCAGCCACGTCACGAATCCGGCCTTGGTCAAT
GCTCCCTGTGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGC
GTCCGCGGTTGTACGGGATACGAGGGTTCGGAAGCACTTTCGTGCGGGAA
TATTTTGGCTGAGGGTGGGACAAAACGCTAAGGAAGATCTTCATGCTTTG
TTGCGAGGGCTGGTCTTGGAGTTGGCGGCAAGGGATAAGGAATTTCCTCC
CCAGCTCGAAAGCTTGGAAGACGTGACGCGTCACCTAACTGCAGTTGGTG
CGAAAAGCCCACTGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAA
GTCGTGGATGCTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCG
CGACCGTGCCGTGGTATCTATGCCAGGAGGGTCCGTTGAGGTAGGGAATA
TGGAGGAGAACGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTT
CGAACAGTTGAACTTCCGCGAGTGGAAGCATTGCAGGTGACAAGTCTGGT
CGCCGTTGACTGTGGGAAGCTGGCTCTCGCGCTTGACCTCGCCGCGCCGC
TGCTAAAGGGCCCTCCACAAGATCCGAACTCTTGGCGCATTTTACATGAT
GCTCTGGCAGCGCAATTGGGGACGCACCGTGCCATGACTGTAGAAGCACG
TGTGCAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGATGACCCCC
GCAGGCAGGAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGGGTACGCTT
GCACCGGTCGCCGTTGACTGTGGGAAGCTGGCTCTCGCGCTTGACCTCGC
CGCGCCGCTGCTAAAGGGCCCTCCACAAGATCCGAACTCTTGGCGCATTT
TACATGATGCTCTGGCAGCGCAATTGGGGACGCACCGTGCCATGACTGTA
GAAGCACGTGTGCAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGA
TGACCCCCGCAGGCAGGAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGG
GTACGCTTGCACCG
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