mRNA_H-paniculata_contig2367.6397.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: D8LQ35_ECTSI (Galactinol--sucrose galactosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ35_ECTSI) HSP 1 Score: 910 bits (2351), Expect = 2.440e-315 Identity = 522/929 (56.19%), Postives = 606/929 (65.23%), Query Frame = 1
Query: 1 VQP-SLGRHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEGYVVLLPLSDTHARASLHSAARD---GDRTVNSWVAND---PLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQL---------------------GLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDALNTEQWDERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQPELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAI--GTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSL----EDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAP-------------MYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGA---GSCASGDIER--------DAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRD------DAGAMPRVGISVKGSGCFLALASRTPTRTTLT----------------TCQSASGNDD--QVGDSSDLA-LEASFTPLPRALVGGKDSAGRSRYERDLGDMGMVEVVIPAPWDGQERRLTFVWN 2538
+QP + GRHLCLHRFKLWWLKP HG SGLD+PPET+L LAE + YV LLP+SDTHARASLH A D G+ S A D P ALA+S+DTGD A LP+ +GVLLVA G DPF L + ++ EA L QL G G +EG+ P A FVD GWCTWDSFYTMVTPEG+L+GLS E G+RP+WVVIDDGWQRTTNDDALNTEQWDERLV LEANKRFRRFDEKGKLLLDLGDTV KMK+ +GVE VL WHAM GYWAGVE +A E+ F P VAKL+APEGIQ VDPEMQPELD K FGMV AFYRAYH YL++NGVDGVKV DAQSILDCMGGGNGGVPAV++AY EGL SVQA+F+EG +PA LIHCMCHAPSVLFHIA VS DR VIRGSDDFYPRE SHGPHLY+N++NALL +N+GV DWDMFQ+GLG +G G+A A + G SWFHAAARAISGGPVYVSD+ GQHN DIL KLVL+DGSV RA TNALPTLDCLMRDPQ +GGGLLQ+WALN L GTG+VGSFNVRG+SFSQ ER WV E AV+G VSPSDVHAF P D GA + PPAP +A+YLH R+E R+V L E+ IE+ L++ELATFSRV+ +RL + +G GS A+ +E DAQ+ ++ WA +GL DM N SAA+S Q+ +G+ D G +P V + VKGSG FLA+ASR P+R TL G DD + G S D+ L+ASF+ L A G S S G +G+VEVVIP PWDG+ER+LTF W+
Sbjct: 47 IQPGNFGRHLCLHRFKLWWLKPSHGHSGLDIPPETALFLAE----MQPQXXXXXXXYVALLPVSDTHARASLHRAGDDSSNGEGLSPSGAAVDEDSPSALAVSADTGDPATLLPDTLGVLLVATGPDPFRLVQRLVREATDRLSTQLVSLKEGARSATVAERVDPGACGEDRGSCDDEGKGRPV-ASFVDSLGWCTWDSFYTMVTPEGVLEGLSTLHEGGVRPRWVVIDDGWQRTTNDDALNTEQWDERLVGLEANKRFRRFDEKGKLLLDLGDTVGKMKRDFGVERVLAWHAMAGYWAGVEPEASEMVPFDPLVAKLLAPEGIQEVDPEMQPELDHKRFGMVRLGNVEAFYRAYHGYLRDNGVDGVKV-DAQSILDCMGGGNGGVPAVTKAYHEGLVQSVQATFKEGGRPAALIHCMCHAPSVLFHIACVSEDRAVIRGSDDFYPREDLSHGPHLYSNSFNALLLSNLGVQDWDMFQTGLGVQG------------------TGDAAGAAGLSEGANASWFHAAARAISGGPVYVSDRPGQHNADILRKLVLEDGSVPRASTNALPTLDCLMRDPQEEGGGLLQVWALNPLAGTGVVGSFNVRGASFSQSERAWVRAGRDDEARGGGAVEGTVSPSDVHAFRITKPHADRAGGAGEM-------------PPAPGDGVEENEDETRCCFALYLHRRRETRVVSLLEAVAIEVLPLSYELATFSRVIGLRLPPLGISTSGEQQQGSSAADVVESRDGDRPGYDAQEDTVRWAILGLSDMFNSSAAVSAQEPFQRGATTRSSGVECDGGMVPGVAVYVKGSGKFLAVASRQPSRVTLGGVGGDGAVGSAGLEQGVIHREDGRDDSGRAGGSGDVTVLDASFSALCAATPDGPPSTALSVGGGRAG-LGLVEVVIPGPWDGRERQLTFWWH 937
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE) HSP 1 Score: 436 bits (1121), Expect = 5.680e-132 Identity = 301/858 (35.08%), Postives = 420/858 (48.95%), Query Frame = 1
Query: 4 QPSLGRHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEGYVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPER-MGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRG-----------------EEGEPVP-----SSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDALNTEQWDERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQ-----PELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGD----KPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTW--VSLEDGKI--------PAVQ----------GVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDAGAMPRVGISVKGSGCFLALASRTPTRTTLT--TCQSASGNDDQVGDSSDLALEASFTPLPRALV 2415
+P+ + L RFKLWW+ P H ++PPET ++L + L + Y + +PL D A+ +L DR+ L L ++TG +P + L V V DPF L LR Q+ GS G G ++ E + +S DF + GWCTWDSFYT V + + GL+ +E GI PKW+V+DDGWQ T+N DA N EQW + L +++AN +FR DEK DL TV K ++++G++ L WHA+ GYWAGV+ D+ +L ++ P A L P GI VDP+M+ + K FG+VP EK +FY YH YLK GV GVKV DAQS+++ +G GNGG ++RA+ L SV+ F + D + +IHCMCH +L + A + VIRGSDDFYPR+ SH PH+Y NA+N+L+ ++ G+ DWDMFQ+ +G DA SW HAA+RA+SGGPVY+SD+ G HNT+IL ++VL+DG VL+ NALP L L DPQ + LL IW PG G+V FN+ GS++SQ RT+ V G + PA Q G V PSD H ++ E AG G + YA+Y H + L + P+ + E+A S+VL +G + WA+IGL DM N AI + + +G + ++VKGSG FLAL S P + + D + S +LAL +T PR+LV
Sbjct: 189 RPNATSMMALARFKLWWMMPKHTTKANEIPPETQMMLTK----LPPDPETGRQLYGLFIPLIDGQAKCNLKGLP---DRS-----------LQLFAETGCPDTPVPSSDVAGLYVGVDEDPFKLVEKSFKLVNTRLRNQVKAGSFGAGGLVPGLVHDAEKQLSRWKKSEVISKKVDNTSPDFSNYLGWCTWDSFYTSVDHDKVFKGLTSLREAGICPKWLVLDDGWQSTSNSDAPNGEQWMDHLTSIKANGKFR--DEKEGT--DLSRTVKKAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLKSQGVHGVKV-DAQSVVNFLGRGNGGSVMLARAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIG--------------------------DA-------SWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQREEDALLSIWNECEAPGHGVVAVFNLFGSAWSQGRRTYAPVRTSSGALSGVPVNGEPAGQNGGEGSLGVGGGVKPSDCHRLLRD--------------YRAEGKEAGIVGDDS-RYAVYFHFGDRLGVGGLDDEHPLVLSKGKCEVAAISKVLTF-------------DTVAGTEGK--------WASIGLVDMFNAGGAIVSEKLSYQGG-------RAQAEMTVKGSGRFLALCSLRPAAVLFDGKSVPFSHSRDSEGVPSLELALPTGYTGKPRSLV 947
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA) HSP 1 Score: 399 bits (1026), Expect = 7.690e-117 Identity = 320/1035 (30.92%), Postives = 444/1035 (42.90%), Query Frame = 1
Query: 31 LHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEGYVVLLPLSDTHARASLHSA--------------ARDGD---RTVNSWVANDPLA-------------LALSSDTGDEAIHLPERMGV-LLVAVGSDPFSL-ARTVLLEARRLLREQLGLGSGGRGEEGE---------------PVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDG----------------------------WQRTTNDDALNTEQW----------------------------------DERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQPELDA-----KHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGD------KPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVH----------------DWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLD-----------------------------------------DGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWV---SLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPM-------------------YAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDAGAMPRVGISVKGSGCFLALASRTPTRTTLTTCQSASGNDDQVGDSSDLALEASFTPLPRALVGGKDSAGRSRYERDLGDMGMVEVVIPAPWDGQERRLTFVWN 2538
LH+FKLWW+KP HG G DVPPET LLL+E + Y + +PL D A+ A+D D R + L L ++TG +P V L VAV DP+ L A++ L +R+ + G GG + E P S+ D + GWCTWDSFYT V + + +GLS + G++P+W+V+DDG WQ T+N A N EQW + L +L AN +FR ++ G LDL DTV K K ++ ++ L WHA+ GYWAGV+ DA +L +F P A+L AP I VDP+M+ K FG+VP E AFY YH YL+ENGVDGVKV DAQS+L+ +G NGG +SRAY L SV F +GD + +IHCMCH +L + + R +IRGSDDFYPR+ +SHG HLY+NA+NALL + G+ DWDMFQ+ LG +SW HAA+RAISGGPVY+SD+ G H+TDIL ++VL+ DG +LR NA+P L +PQ +GGGLL +W N PG G++G+FN+RGS+++QQ R + + D ++G +SP D + K+ + + ++P A A+ PA M +AMYLH R + ++ L + PI + + FELA +RV + AG + WA++GL DM N A+ + S GA + I +KG+G FLA S PT TL + A + V A + +EV +PA + G RRL +W+
Sbjct: 186 LHKFKLWWMKPTHGRRGSDVPPETQLLLSE----MPPDPETGRRLYSLFIPLLDGPAKCXXXXXXXXXXXXXRYVGIIAQDNDIEGRCLXXXXXXXXXXXXXXXMKGLPDQHLQLLAETGCSKTPVPSSDFVGLFVAVHDDPYELLAKSFKLVQKRMASQVKGGALGGLIRDAEHALYKMKRHEVVKRVPDRSAPDMCNYLGWCTWDSFYTAVDSDKVFEGLSSLEAAGVKPRWLVLDDGERYFKXXXXXXXXXXXXXXXXXXXXXXXWQSTSNIKAKNGEQWMQEALLVMPSVCSQSSTRRSATDAVALAAGACSGHDHLTSLVANSKFRN-EKHG---LDLRDTVQKAKTEHDIKYFLVWHAIAGYWAGVDMDAPDLFKFRPQRARLTAPLDIVAVDPDMKMFFRVCKFLNKRFGVVPPEHIRAFYDEYHRYLRENGVDGVKV-DAQSLLNFVGYNNGGSVEMSRAYHYALSKSVTRHFPDGDTARGSGRGGRIIHCMCHDNEILLTLPSCYARRPLIRGSDDFYPRDEASHGSHLYSNAFNALLIGHCGLQAKALDGFTHHALAGLRDWDMFQTTLG---------------------------------PVSWMHAASRAISGGPVYISDRPGAHDTDILKRIVLEAQRXXXXXXXXXXXXXVRQPRFSACVRSXXXXXXXXXXXXEDGGILRPVQNAMPAARTLFDNPQTQGGGLLTLWNENPAPGHGVLGAFNIRGSAWNQQRRAYAFNSASPDRAREEIRGSLSPRDCNVLIKQTR-------RPRHDHPLKTPHAHAT--PAVMEAAXXXXXXXXXXXDENEIFAMYLHRRGKLLLLRLSDEVPIALGASQFELAAIARVTTL------PGKAG-----------------VRWASVGLADMFNAGGAVLAER-----SSAAQNGAATTLSIDLKGAGRFLAHCSVRPTSVTLDGEELAFTHGPAVARPYSAAXXXXXXXXXXXXX---XXXXXXXXXXXXXGVPALEVEVPAGYAGTARRLQVMWS 1138
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A7S3Y1T0_HETAK (Galactinol--sucrose galactosyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1T0_HETAK) HSP 1 Score: 359 bits (921), Expect = 1.230e-106 Identity = 236/632 (37.34%), Postives = 315/632 (49.84%), Query Frame = 1
Query: 478 FVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDALNTEQWDERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQP-----ELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKP---------------AP-LIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGL-LQIWALNTLPGT--GIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDAGAMPRVGISVKGSGCFLALASRTP 2301
F+D FGWCTWDSFYT V P G+ GL + G P+W+V+DDGWQ T+N A N EQW ++L L AN +FR E G DLGD V ++K+ +GV++ L WHA+ GYWAGVE L+++ +PE + VD ++ L K GMV + +GAFY YH YL E GVDG+KV DAQSI++ MG G GG V+ AY + L S F K AP LIHCMCH +L +A + R ++RGSDD YPR+ +SHGPHLY NA+NALL + +G+ DWDMFQ+ LG SW H AARA+SGGPVYVSD+ G+H+ +L +LVL G VLR+ NALP L L DPQ G L +W + G G++G F+V G+ + + R + + A + V PSDVH+ A A E+E G A+ YA+Y H L E + A+E+ T R E+ + A + WA +GL DM N AA+ Q++ V+G A + ++G G LAL SR P
Sbjct: 23 FLDGFGWCTWDSFYTQVCPAGVRRGLQSLRAAGFAPRWLVLDDGWQSTSNPHAKNEEQWMDKLTDLRANAKFR-DPETG---TDLGDLVREVKRDFGVKEFLVWHALAGYWAGVER-TPALEKYAIVDTLPHSPEKLMQVDRDLWKLTLYLNLMNKKQGMVHPDHAGAFYEDYHRYLAEQGVDGIKV-DAQSIVNVMGNGLGGSVKVAAAYHKALQRSSMKHFSGRRKEGVEGXXXXXXXXQPRAPNLIHCMCHDSEILLLLAGLYEHRPLVRGSDDHYPRDPASHGPHLYFNAFNALLVSFVGLQDWDMFQTALGPG---------------------------------SWLHGAARAVSGGPVYVSDRPGEHDAALLRRLVLPGGGVLRSAHNALPVLGSLFEDPQAAGARRPLAVWNTHATAGNAAGVLGLFHVAGAGWHARRRKFAFHPGARPGAQEAEVRPSDVHSL------------ACAAHAEEEGEGGVAA---RRKYALYFHAAGRLAERGLDEPARCAVAPGAYEVVTVVRAAELMAAAARP---------------------VRWAPVGLPDMFNSGAAVLSQEV-VEGE------AHALAAVRLRGEGRALALCSRPP 572
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: D7FLK6_ECTSI (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK6_ECTSI) HSP 1 Score: 348 bits (894), Expect = 9.440e-104 Identity = 222/591 (37.56%), Postives = 312/591 (52.79%), Query Frame = 1
Query: 526 VTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDALNTEQWDERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQ-----PELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGD----KPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTW--VSLEDGKI--------PAVQ----------GVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKG 2211
V + + GL+ +E GI PKW+V+DDGWQ T+N DA N EQW + L +++AN +FR DEK DL TV + ++++G++ L WHA+ GYWAGV+ D+ +L ++ P A L P GI VDP+M+ + K FG+VP EK +FY YH YL+ GV GVKV DAQS+++ +G GNGG ++RA+ L SV+ F + D + +IHCMCH +L + A + VIRGSDDFYPR+ SH PH+Y NA+N+L+ ++ G+ DWDMFQ+ +G DA SW HAA+RA+SGGPVY+SD+ G HNT+IL ++VL+DG VL+ NALP L L DPQ + LL IW PG G+V FN+ GS++SQ RT+ V G + PA Q G V PSD H ++ +AE ++ AG G + YA+Y H + L + P+ + E+A S+VL +G + WA+IGL DM N AI + + +G
Sbjct: 23 VDHDKVFKGLTSLREAGICPKWLVLDDGWQSTSNSDAPNGEQWMDHLTSIKANGKFR--DEKEGT--DLSRTVKRAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKV-DAQSVVNFLGRGNGGSVMLARAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIG--------------------------DA-------SWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQREEDALLSIWNECEAPGHGVVAVFNLFGSAWSQGRRTYAPVRTSSGALSGVPVNGEPAGQNGGEGGVGVGGGVRPSDCHRLLRD----------HRAEVKE----AGVVGDDS-RYAVYFHFGDRLGVGGLDDEHPLVLSKGKCEVAAISKVLTF-------------DTVAGTEGK--------WASIGLVDMFNAGGAIVSEKLSYQG 539
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A0E0KKJ1_ORYPU (Galactinol--sucrose galactosyltransferase n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0KKJ1_ORYPU) HSP 1 Score: 335 bits (860), Expect = 8.030e-97 Identity = 262/822 (31.87%), Postives = 377/822 (45.86%), Query Frame = 1
Query: 19 RHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEG----YVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRT---TNDDALNT-----EQWDERLVALEANKRFRRFDEKGKLLLDLGDTVA----------KMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEM-QPELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDA----GAMPRVGISVKGSGCFLALASRTPTRTTLTTCQSASGNDDQVGDSSDLALEASFTPLP 2403
R +C RFKLWW+ G SG DVP ET +L E S AGA ++G Y+V+LPL + RA+L RD L + ++GD+A+ + ++ + G++PF + +A +++ L E + +PS F+D FGWCTWD+FYT VT +G+ GL E G P++++IDDGWQ+ +DA N Q+ RL ++ N +F++ EK + D G+T A + K+++GV+ V WHAM GYW GV+ AE ++ + +A V G+ P++ L G+V + AFY H YL GVDGVKV D Q+I++ +G G+GG +++RA+ L SV +F + I CMCH +L+ +R V+R SDDFYPR+ +SH H+ + AYN L DWDMF S + A + +H AARAI G P+YVSD+ G HN ++L KLVL DGSVLRAQ PT DCL DP G LL+IW +N TG+VG FN +G+ + + + + D + G V DV A DL G G +G +Y H E + + P+ + L FEL V+ + G + +A IGL DM N A+ E D+ D +A A V + V+G G F A +SR P R L + D +D L A P+P
Sbjct: 67 RFMCCFRFKLWWMTQRMGTSGRDVPLETQFMLLE------SRAGAGDDGGEPVYLVMLPLLEGQFRAALQGNDRD--------------ELEICIESGDKAVQTAQGTYMVYMHAGTNPFD----TITQAVKVVERHLQTF---HHREKKKLPS---FLDWFGWCTWDAFYTDVTADGVKQGLQSLAEGGTPPRFLIIDDGWQQIGSENKEDADNAVVQEGAQFASRLTGIKENSKFQK-KEKTTAMADGGETAAATAGLKALVKEAKEEHGVKYVYVWHAMAGYWGGVKPAAEGMEHYESALAFPVQSPGVMGNQPDIVMDSLSVLGLGLVHPRMALAFYGELHAYLASCGVDGVKV-DVQNIIETLGAGHGGRVSLTRAFHRALEASVARNFPDNG----CISCMCHNTDMLYS----ARQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHS------------------------LHPAAE----------YHGAARAIGGCPIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPTRDCLFADPARDGASLLKIWNVNKC--TGVVGVFNCQGAGWCRITKK-TRVHDAAPGTLTGSVRADDVDAIA------DLA-------------GTGWTGDAV----VYTHRSGELIRLPKGATLPVTLKVLEFELFHVCPVMTVA------------------------PGGVTFAPIGLLDMFNSGGAVEECDVRAIDGDGGEACTVAAAAAVVRLRVRGCGRFGAYSSRRPARCALDAAEVEFSYD------ADTGLVALDVPVP 758
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A6P5MCJ8_ARADU (Galactinol--sucrose galactosyltransferase n=4 Tax=Arachis TaxID=3817 RepID=A0A6P5MCJ8_ARADU) HSP 1 Score: 330 bits (845), Expect = 1.210e-94 Identity = 251/797 (31.49%), Postives = 371/797 (46.55%), Query Frame = 1
Query: 19 RHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEGYVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTN-----DDALNTE--QWDERLVALEANKRFRRFDEKGKLL-LDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEMQPELDAKH-FGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLREST--PIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDI--------------------GVKGSDRDDAGAMPRVGISVKGSGCFLALASRTPTRTTL 2316
R +C RFKLWW+ G G DVP ET +L E S+ S Y+V+LPL + RA L ND L + ++GD+ + + + ++ + G++PF V+ +A + + ++ S E + +PS FVD FGWCTWD+FYT VT +G+ +GL + G P++++IDDGWQ+ + DD + E Q+ RL ++ N +F++ +E+ L L V + KK Y V+++ WHA+ GYW GV+ AE ++ + +A V GI P++ + A H G+V +K FY H YL GVDGVKV D Q+I++ +G G+GG ++R+Y H+++AS I CMCH L+ S+ V+R SDDFYP + +SH H+ + AYN L DWDMF S + A + +HAAARAI G P+YVSD+ G H+ D+L KLVL DGSVLRAQ PTLDCL DP G LL+IW LN +G+VG+FN +G+ + + E+ + + D + VS SDV + GAG G + + + I+ L T P+ ++ L +EL F V EI SI +A IGL DM N A+ + +I S+R A A + + V+GSG F +S+ P + T+
Sbjct: 67 RFMCCFRFKLWWMTQRMGKCGRDVPLETQFMLIE-SNGNEIDEDNSATIYIVMLPLLEGQFRAVLQG--------------NDKNELEICLESGDKDVVTRQGLNLVYIHAGTNPFE----VINQAVKAVENRMQTFSH---REKKRLPS---FVDWFGWCTWDAFYTDVTADGVEEGLKSLSDGGTPPRFIIIDDGWQQIESEPNEADDCVVQEGAQFATRLTGIKENAKFQKKNEQNNEQDLGLKHVVDEAKKNYNVKNIYVWHALAGYWGGVKPAAEGMEHYESALAYPVQSPGILGNQPDIVMDSLAVHGLGLVHPKKVFDFYNDLHAYLASCGVDGVKV-DVQNIIETLGAGHGGRVMLTRSYH----HALEASIAHNFPDNGCIACMCHNTDSLYS----SKQTAVVRASDDFYPHDPASHTIHVSSVAYNTLFLGEFMQPDWDMFHS------------------------LHPAAE----------YHAAARAIGGCPIYVSDKPGNHDFDLLKKLVLPDGSVLRAQLPGRPTLDCLFADPARDGTSLLKIWNLNKY--SGVVGAFNCQGAGWCRVEKR-IRIHDASPGTLSSFVSASDVDLIAQ-------------------VAGAGWRGD------VIAYAYRSGDIIRLSNGTSVPVILNVLEYELFHFCPVEEIT-------------------------SSISFAAIGLLDMFNTGGAVEQVEIHKVSENNMELYDDEASSEVTNDPSSNRSAAAAAATMSLKVRGSGRFGVYSSQRPLKCTV 742
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A0D9WWR2_9ORYZ (Galactinol--sucrose galactosyltransferase n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WWR2_9ORYZ) HSP 1 Score: 327 bits (838), Expect = 6.360e-94 Identity = 250/811 (30.83%), Postives = 362/811 (44.64%), Query Frame = 1
Query: 19 RHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSP------AGASNEGYVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDALNTE---------QWDERLVALEANKRFRRFDEKGKLLLDLGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEM-QPELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDAGAMPRVGISVKGSGCFLALASRTPTRTTLTTCQSASGNDDQVGDSSDLALEASFTPLP 2403
R +CL RFKLWW+ G SG DVP ET +L E S AGA YVV+LPL + RA+L ND L + ++GD+A+ + + ++ + G++PF + +A + + + L + + +PS F+D FGWCTWD+FYT VT +G+ GL G P++++IDDGWQ+ D ++ Q+ RL ++ N +F D L + V ++K+ GV V WHAM GYW GV E+ R+ +A + G+ P++ L G+V + FY H YL GVDGVKV D QSI++ +G G+GG A++RAY L SV SF + + CMCH +L+ SR+ V+R SDDFYPR+ +SH H+ + AYN++ DWDMF S + A + +H AARAI G +YVSD+ G H+ ++L KLVL DGSVLRA+ PT DCL DP G LL+IW LN G +VG FN +G+ + + + + D + V +DV A + A A+ Y HC E + + P+ + +L +E+ F V I ++ + +A IGL DM N A+ E D+ D D G V + V+G G F A SR P R C+ G++ D L A P+P
Sbjct: 63 RFMCLFRFKLWWMTQRMGSSGRDVPMETQFMLIEVPASAGGDGHDGAGAGAGEPVYVVMLPLLEGQFRAALQG--------------NDDDELQICIESGDKAVQTEQGVNMVYLHAGTNPFD----TITQAVKAVEKHLQTF---HHRDKKKLPS---FLDWFGWCTWDAFYTDVTADGVKQGLHSLAAGGAPPRFLIIDDGWQQIGTDSDETSKPAVAVQEGAQFASRLTGIKENSKFHPNDS------GLKNLVTQVKRTQGVRQVYVWHAMAGYWGGVSPSPSEMSRYEAALAFPIQSPGVTANQPDIVMDSLSVLGLGLVHPRRVHTFYGELHAYLATCGVDGVKV-DVQSIIETLGAGHGGRVALTRAYTRALEASVARSFPDNG----CVSCMCHNTDMLYS----SRNTAVVRASDDFYPRDPASHTVHVASVAYNSVFLGEFMQPDWDMFHS------------------------LHPAAE----------YHGAARAIGGCAIYVSDKPGNHDFNLLKKLVLPDGSVLRARLPGRPTRDCLFSDPARDGATLLKIWNLNKFGG--VVGVFNCQGAGWCRVAKK-TRVHDASPGTLTAAVRAADVDAIS-----------------------AAAAAEWTGDAVAYAHCAGELVRLPRGAAIPVTLGALQYEIFHFCPVRVIAIA------------------------GVEFAPIGLIDMFNAGGAVEECDVI---GDVDSGGG--GVEMRVRGCGRFGAYLSRRPAR-----CE-VDGDEVDFAYDDDTGLVAVELPVP 739
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: A0A6J1IZD0_CUCMA (Galactinol--sucrose galactosyltransferase n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IZD0_CUCMA) HSP 1 Score: 329 bits (843), Expect = 6.780e-94 Identity = 247/794 (31.11%), Postives = 367/794 (46.22%), Query Frame = 1
Query: 19 RHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEG---YVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRTTNDDAL------NTEQWDERLVALEANKRFRRFDEKGKLLLD----LGDTVAKMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDP-EMQPELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDRDDAGAMPRVGISVKGSGCFLALASRTPTRTTLTTCQSASGNDDQVG 2358
R LC RFKLWW+ G SG ++P ET ++ E N G + EG Y V LP+ + RA L ND L + ++GD A+ E ++ V GSDPF + + L+ + + +P D ++ FGWCTWD+FYT V +G+ GL F+ GI PK+V+IDDGWQ D A NT + RL ++ N +F++ ++G+ + D L V+ MK+K+ + + WHA+TGYW GV S +E+++F +A VA G+ + +P E + G+V EK FY H+YL GVDGVKV D Q+IL+ +G G+GG ++R Y + L S+ +F++ +I CM H+ L+ S+ VIR SDDF+PR+ +SH H+ + AYN+L DWDMF S + D +H AARA+ G +YVSD+ GQH+ ++L KLVL DGS+LRA+ PT DCL DP G LL+IW LN L +G+VG FN +G+ + + + + + D + GV+ DV +K G G +G A ++ H E + S PI + +E+ T V E+ SI +A IGL M N A+ E + S+ + + V+GSG F A +S P R + + + G D++ G
Sbjct: 140 RFLCAFRFKLWWMTQRMGTSGQEIPFETQFMVVEARDGSNF-TGNAEEGAAVYTVFLPILEGDFRAVLQG--------------NDNNELEICLESGDPAVDGFEGSHLVFVGAGSDPFETITYAVKSVEKHLQTFAH-------RDRKKMP---DILNWFGWCTWDAFYTEVDSDGVKKGLESFESGGIPPKFVIIDDGWQSVAKDSASADCKADNTANFANRLTNIKENYKFQKDGKEGERVEDPELGLQHMVSYMKEKHATKYIYVWHAITGYWGGVSSGVKEMEQFESKLAYPVASPGVDSNEPCEALNSITKTGLGLVNPEKIFNFYNEQHSYLASAGVDGVKV-DVQNILETLGAGHGGRVKLARKYHQALEASISRNFRDNG----IISCMSHSTDALYS----SKRNAVIRASDDFWPRDPASHTIHIASVAYNSLFLGEFMQPDWDMFHS-----------LHPMAD-----------------------YHGAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFMDPARDGKSLLKIWNLNDL--SGVVGVFNCQGAGWCKVGKKNL-IHDENPDTITGVIRAKDVSYLSK-------------------VAGNGWTGDAA----IFSHLAGEVVYLPQDSSMPITLKPREYEIFTVVPVKELA-------------------------NSIKFAPIGLIKMFNSGGAVKELHHQPESSN---------ISLKVRGSGPFGAYSSSKPKRVAVDSEEVEFGYDEESG 805
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Match: Q6ATP7_ORYSJ (Galactinol--sucrose galactosyltransferase n=11 Tax=Oryza TaxID=4527 RepID=Q6ATP7_ORYSJ) HSP 1 Score: 327 bits (839), Expect = 7.130e-94 Identity = 258/818 (31.54%), Postives = 371/818 (45.35%), Query Frame = 1
Query: 19 RHLCLHRFKLWWLKPCHGFSGLDVPPETSLLLAERSHSLNSPAGASNEGYVVLLPLSDTHARASLHSAARDGDRTVNSWVANDPLALALSSDTGDEAIHLPERMGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADFVDKFGWCTWDSFYTMVTPEGILDGLSGFQERGIRPKWVVIDDGWQRT---TNDDALNT-----EQWDERLVALEANKRFRRFDEKGKLLLDLGDTVA----------KMKKKYGVEDVLTWHAMTGYWAGVESDAEELQRFHPFVAKLVAPEGIQTVDPEM-QPELDAKHFGMVPSEKSGAFYRAYHTYLKENGVDGVKVVDAQSILDCMGGGNGGVPAVSRAYEEGLCHSVQASFQEGDKPAPLIHCMCHAPSVLFHIAAVSRDRVVIRGSDDFYPREASSHGPHLYTNAYNALLFANIGVHDWDMFQSGLGCKGKDAVVIGDSRDGVVDDCKVGEAEDATAIGTKISWFHAAARAISGGPVYVSDQLGQHNTDILSKLVLDDGSVLRAQTNALPTLDCLMRDPQLKGGGLLQIWALNTLPGTGIVGSFNVRGSSFSQQERTWVSLEDGKIPAVQGVVSPSDVHAFTKEPPGTDLEQGAEQAEQEQESPGAGASGPPAPMYAMYLHCRKEARIVCLRESTPIEIDSLAFELATFSRVLEIRLSQAHSNGAGAGSCASGDIERDAQDGSIFWATIGLRDMLNPSAAISEQDIGVKGSDR----DDAGAMPRVGISVKGSGCFLALASRTPTRTTLTTCQSASGNDDQVGDSSDLALEASFTPLP 2403
R +C RFKLWW+ G SG DVP ET +L E G YVV+LPL + RA+L RD L + ++GD+A+ + ++ V G++PF + +A +++ L E + +PS F+D FGWCTWD+FYT VT +G+ GL E G P++++IDDGWQ+ +DA N Q+ RL+ ++ N +F++ + D G+T A + KK++GV+ V WHAM GYW GV+ AE ++ + VA V G+ P++ L G+V + AFY H YL GVDGVKV DAQ+I++ +G G+GG +++RA+ L SV SF + I CMCH +L+ +R V+R SDDFYP + +SH H+ + AYN L DWDMF S + A + +H AARAI G P+YVSD+ G HN ++L KLVL DGSVLRA+ PT DCL DP G LL+IW +N TG+VG FN +G+ + + + + D + G V DV A + G G +G +Y H E + + P+ + L FEL V+ + + G G G + +A IGL DM N A+ E D+ V+ D + V + +G G F A +SR P R L + D +D L A P+P
Sbjct: 67 RFMCCFRFKLWWMTQRMGTSGRDVPLETQFMLLESRDG----GGGGEAVYVVMLPLLEGQFRAALQGNDRD--------------ELEICIESGDKAVQTAQGTYMVYVHAGANPFD----TITQAVKVVERHLQTF---HHREKKKLPS---FLDWFGWCTWDAFYTDVTADGVKQGLQSLAEGGTPPRFLIIDDGWQQIGSENKEDAGNAVVQEGAQFASRLIGIKENTKFQKTTTTA--MADGGETAASAAGLKALVEEAKKEHGVKYVYVWHAMAGYWGGVKPAAEGMEHYESAVAFPVQSPGVMGNQPDIVMDSLSVLGLGLVHPRMALAFYGELHAYLASCGVDGVKV-DAQNIIETLGAGHGGRVSLTRAFHRALEASVARSFPDNG----CISCMCHNTDMLYS----ARQTAVVRASDDFYPLDPASHTIHISSVAYNTLFLGEFMQPDWDMFHS------------------------LHPAAE----------YHGAARAIGGCPIYVSDKPGNHNFELLKKLVLPDGSVLRARLPGRPTRDCLFVDPARDGASLLKIWNVNKC--TGVVGVFNCQGAGWCRITKK-TRVHDAAPGTLTGSVRADDVDAIA-------------------DVAGTGWTGDAV----VYAHRSGELIRLPKGATLPVTLKVLEFELFHVCPVMTV------APGGGGGG--------------VTFAPIGLLDMFNSGGAVEECDV-VRALDAAGEAEXXXXXXVVRLRARGCGRFGAYSSRRPARCALDAVEVEFSYD------ADTGLVALDVPVP 758 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2367.6397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2367.6397.1 >prot_H-paniculata_contig2367.6397.1 ID=prot_H-paniculata_contig2367.6397.1|Name=mRNA_H-paniculata_contig2367.6397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=738bp MGVLLVAVGSDPFSLARTVLLEARRLLREQLGLGSGGRGEEGEPVPSSADback to top mRNA from alignment at H-paniculata_contig2367:1390..9677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2367.6397.1 ID=mRNA_H-paniculata_contig2367.6397.1|Name=mRNA_H-paniculata_contig2367.6397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8288bp|location=Sequence derived from alignment at H-paniculata_contig2367:1390..9677+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2367:1390..9677+ >mRNA_H-paniculata_contig2367.6397.1 ID=mRNA_H-paniculata_contig2367.6397.1|Name=mRNA_H-paniculata_contig2367.6397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4428bp|location=Sequence derived from alignment at H-paniculata_contig2367:1390..9677+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |