mRNA_H-paniculata_contig236.6375.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE) HSP 1 Score: 357 bits (915), Expect = 5.360e-112 Identity = 228/505 (45.15%), Postives = 268/505 (53.07%), Query Frame = 1
Query: 157 EVDTARTETGTYKMQTPDFEACF-PAVS-------FQESGSLEPPSRPMQWGLWSPKDRRWMQICQENYDANH---GRQDADRPYQIPRKIHQIWLGRPLPEAFGRLQESWKAWHEG-----------------WELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGETC----TPRQPDSIGVPVSLSLPA---MGAVAXXXXXXXXXXXXSRQRETV-DPLAALTGGLGGLGGTRGEGLLADLLGGDDRASLKQAVEVEPGSATETIVKTGPGVFTLAVMNWMSAAATSSATASAIAARSTFPTDGAPSPRVHETFDDKVAAA------------------------------------------------AVAVGSTTMVLPPSYFYPVPNNTT----GDLIGNGREDEIRASGAGRWFREESLAAHLWAKSWQ 1407
+VD + G P F CF P+ + + S+ ++WGLWSP D WMQ+ Q+NY+ +H G D IP KIH IWLG PLP AF RL ESW A H G WE+RLWTD+D+ FGL+N+ AYDAA NFGQ+SDILRYEILLR GGLYVD+DF+CL FD LHRRY+FY+G+S T TFELNNGLIGCRPGHPI+RDIV+RI +C + P G P S S+ A + V TV DPL+AL G LG GG G LLA LLGGDDRA L+QAVEVE SATETIVKTGPGVFT AVM WM SSAT AA +T G S + F AA A+A M+LPPSY YP+PNN G LIG+G E +R AG + ESLAAHLW +SWQ
Sbjct: 8 DVDEGAHDVGPAAPLRPVFSDCFSPSPTSXXXXXXXXXAASILSARAKIRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIREDGEPLIPLKIHHIWLGSPLPAAFARLCESWLARHSGPSSQGLGHEMSKSSSTPWEVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLSSFDDLHRRYEFYAGVSNTGTFELNNGLIGCRPGHPIMRDIVNRIKSSCCSLPSSTPPSHPGKPSSSSVAAGVLLSGVGVAGSVTDAGGDGXXXGTTVGDPLSALMGALGEEGGAGG--LLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWM----VSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAARDADAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAATRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRER-AGGYLSSESLAAHLWGRSWQ 505
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: D7FIJ5_ECTSI (Surface protein Sur1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ5_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.390e-63 Identity = 104/171 (60.82%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 277 MQWGLWSPKDRRWMQICQENYDANH---GRQDADRPYQIPRKIHQIWLGRPLPEAFGRLQESWKAWHEG-----------------WELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIG 729
M+WGLWSP D WMQ+ Q+NY+ +H G D IP KIH IWLG PLPEAF RL+ESW A H G WE+RLWTD+DV+ FGL+N+ AYDAA NFGQ+SDILRYE+LLR GGLYVD+DF+CLG FD LH+RY+FY+G+S T TFELNNGLIG
Sbjct: 1 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 171
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A836C8H1_9STRA (Surface protein Sur1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H1_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.330e-46 Identity = 83/189 (43.92%), Postives = 111/189 (58.73%), Query Frame = 1
Query: 199 QTPDFEACFPAVSFQESGSLEPPSRPMQWGLWSPKDRRWMQICQENYD------------ANHGRQDADRPYQIPRKIHQIWLGRPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIG 729
Q P FE C P+ RP++W LWS +DRRW+ + +Y+ A G+Q IP +HQ+WLG +P F L+ESW H+GWELRLW DVE FGL+N+ A+DAA N+G++SDI RYEIL R GG+YVD+DF+CL + DF++GL+ E+NNGLIG
Sbjct: 6 QWPAFEDCLPS------------DRPLKWALWSTEDRRWLHLASLHYEHTWRQRCSGDATAAIGQQPC-----IPHTLHQVWLGGSMPSKFRDLRESWAKLHDGWELRLWGGGDVEDFGLENRAAFDAATNYGEKSDIFRYEILHRHGGIYVDVDFLCLQSLQVMADNLDFFAGLANVGAVEINNGLIG 177
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A6G0WYT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYT2_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.900e-46 Identity = 92/200 (46.00%), Postives = 121/200 (60.50%), Query Frame = 1
Query: 277 MQWGLWSPKDRRWMQICQENYDANHGRQDADR---PYQIPRKIHQIWLGRPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRR--YDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGETCTPRQ--PDSIGVPVSLSLPAMGAVA 855
M++ LW +D W E +D +A P IP++IHQIWLG L + F +SWK H WE LWT+ ++E + LQN+ AYD A NFG++SDILRYEIL GGLYVD+DF CL FD LH +FY+GLS T + E+NN LIGC P HPI++ ++S I RQ D GVPV+ +P +G +A
Sbjct: 1 MRYKLWGAEDMAWHFHLSERFDEQRDLWEAPPSPGPPVIPKRIHQIWLGPALMDEFHSYIQSWKNHHPDWEYTLWTEREIENWKLQNQAAYDMATNFGEKSDILRYEILETFGGLYVDVDFECLKPFDQLHENPTCEFYAGLSNTRSVEINNALIGCVPNHPILKAVISAIQRETKRRQLIADYAGVPVN-DIPKLGTIA 199
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: F0W3M3_9STRA (Surface protein Sur1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3M3_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.310e-41 Identity = 80/177 (45.20%), Postives = 106/177 (59.89%), Query Frame = 1
Query: 265 PSRPMQWGLWSPKDRRWMQIC----QENYDANHGRQDADRPYQIPRKIHQIWLG-RPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGE 780
P+ +W WSP DR W Q E N D +IP IHQIWLG P+P + E+W+ H WE +LWTD+ V LQNK +D AGN+G++SDILRYEILL+ GG+YVD+DF CL +F L + + F +G+S T ELNNGLI C HPI+R++V+ +
Sbjct: 36 PNPECKWNFWSPDDRDWNQALLSQSTERLCDNQMFPTVDNAVRIPFIIHQIWLGPHPIPAFCLQQMETWRQIHPQWEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDLLQAFSFITGISNTDVVELNNGLIACTRNHPIVRELVASLAS 212
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A7V1HDM7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Dependentiae bacterium TaxID=2030827 RepID=A0A7V1HDM7_9BACT) HSP 1 Score: 155 bits (391), Expect = 3.220e-39 Identity = 76/160 (47.50%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 301 KDRRWMQICQENYDANHGRQDADRPY-QIPRKIHQIWLGRPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGL-SGTATFELNNGLIGCRPGHPIIRDIVSRI 774
++ RW Q + YD + Y +IP+ IHQIW+G LPE + QESW+ H WE +LWTD D+E+FGL NK YD N+ Q++DI RYEIL REGGLYVD DF C+ FD H DFY+G+ F L N LIG PGHPI+ + I
Sbjct: 59 EEDRWWQQAKNLYDTYVVNKVEHAEYARIPKIIHQIWIGSSLPEKYYLWQESWQTRHPDWEYKLWTDKDIEEFGLTNKYWYDQTTNYAQKADIARYEILYREGGLYVDTDFECIHSFDIFHHTCDFYAGIMQWKEGFRLCNALIGSAPGHPILEACIENI 218
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A485KRR7_9STRA (Aste57867_10970 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRR7_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.880e-37 Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 382 IPRKIHQIWLGRPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRR--YDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGETCTPRQPDSIGVPVSLSLPAM 843
IP++IHQIWLG +AF +SW A H WE LWT+ D+ Q+ L N++A+DAA N+G++SDI RYEIL R GG+YVD+DF CL D +H FY+GLS T T E+NN LIG P HPI++ +++ I T RQ I L L AM
Sbjct: 23 IPKRIHQIWLGPAPLDAFREWMKSWGALHPDWEYTLWTERDLGQWTLTNQMAFDAATNYGEKSDIWRYEILERHGGVYVDIDFECLRPLDAMHEHDGCSFYAGLSNTNTVEVNNALIGVVPHHPILQALIASI--TVQARQDHLIAQYAGLPLSAM 176
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A812RTB0_9DINO (Cilia- and flagella-associated protein 299 n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A812RTB0_9DINO) HSP 1 Score: 157 bits (398), Expect = 1.900e-36 Identity = 86/185 (46.49%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 253 SLEPPSRP--MQWGLWSPKDRRWMQICQENYDANHGRQDADRPYQ-IPRKIHQIWLG-RPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQF-----GLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGE 780
SLE P R ++W LWSPKDR W++ +E + R ++ P IPR+IHQIWLG R PE R WKA H WE RLWTD D + GL AY+AA N ++SDILR I+LR GGLYVD+DF CL D LH R FY GLS E+NNGL GHP++ + +G+
Sbjct: 13 SLELPERSNEVRWNLWSPKDRSWLEELKELWQDAVSRLESTPPQNMIPRRIHQIWLGPRRWPEPCERFAGEWKARHPTWEYRLWTDDDAGEELRGHPGLAK--AYEAADNPAEKSDILRLAIILRHGGLYVDVDFECLKPLDVLHSRASFYCGLSNVGAVEVNNGLFAATAGHPLVSYLCDHLGK 195
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A7V1MPV4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Dependentiae bacterium TaxID=2030827 RepID=A0A7V1MPV4_9BACT) HSP 1 Score: 147 bits (371), Expect = 9.110e-36 Identity = 70/141 (49.65%), Postives = 92/141 (65.25%), Query Frame = 1
Query: 382 IPRKIHQIWLG-RPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLAYDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTAT---FELNNGLIGCRPGHPIIRDIVSRIGETCTP 792
IP+ IHQIW+G P P LQ++WK H W+ +LWTD+DV++ L N+ AY+ A N+GQ+SDILRYEIL + GGLYVD DF C FD H DFY+G++G + F L N LIGC PGHPII+ + + + P
Sbjct: 77 IPKIIHQIWVGPHPFPNKCKVLQKTWKKHHPDWKYKLWTDADVKELDLINEAAYEKAKNYGQKSDILRYEILYKYGGLYVDTDFECFRAFDIFHHCLDFYTGIAGLSNKGAFGLINALIGCAPGHPIIKACIETMNISDKP 217
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Match: A0A812NYH8_SYMPI (RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812NYH8_SYMPI) HSP 1 Score: 155 bits (391), Expect = 1.080e-35 Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 277 MQWGLWSPKDRRWMQICQENYD---ANHGRQDADRPYQ-IPRKIHQIWLG-RPLPEAFGRLQESWKAWHEGWELRLWTDSDVEQFGLQNKLA--YDAAGNFGQQSDILRYEILLREGGLYVDLDFVCLGVFDGLHRRYDFYSGLSGTATFELNNGLIGCRPGHPIIRDIVSRIGE 780
++WGLWSP DR+W++ +E + A G P IP+ IHQIWLG R PE SW++ H GWE RLWTD+DV + LA Y+AA N ++SDILR I+LR GGLYVD+DF CL LH R FY GLS E+NNGL PGHP++ + R+G+
Sbjct: 524 IRWGLWSPNDRQWLEELKELWQDAVAQLGSAPGLDPRPAIPQCIHQIWLGGRSRPEPCEGFTASWRSRHPGWEYRLWTDADVAEELTHPGLAQAYEAASNPAEKSDILRLAIILRHGGLYVDVDFECLQPLGALHSRASFYCGLSNVGAVEVNNGLFAATPGHPLVSYLCDRLGK 698 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig236.6375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig236.6375.1 >prot_H-paniculata_contig236.6375.1 ID=prot_H-paniculata_contig236.6375.1|Name=mRNA_H-paniculata_contig236.6375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp MQTPDFEACFPAVSFQESGSLEPPSRPMQWGLWSPKDRRWMQICQENYDAback to top mRNA from alignment at H-paniculata_contig236:8904..17296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig236.6375.1 ID=mRNA_H-paniculata_contig236.6375.1|Name=mRNA_H-paniculata_contig236.6375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8393bp|location=Sequence derived from alignment at H-paniculata_contig236:8904..17296+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig236:8904..17296+ >mRNA_H-paniculata_contig236.6375.1 ID=mRNA_H-paniculata_contig236.6375.1|Name=mRNA_H-paniculata_contig236.6375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at H-paniculata_contig236:8904..17296+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |