mRNA_H-paniculata_contig2336.6301.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2336.6301.1
Unique NamemRNA_H-paniculata_contig2336.6301.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: D7FR55_ECTSI (Cilia- and flagella-associated protein 206 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR55_ECTSI)

HSP 1 Score: 911 bits (2355), Expect = 0.000e+0
Identity = 478/667 (71.66%), Postives = 548/667 (82.16%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRD----------LADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGD---NGKARSKSVLTAPEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAGE 1979
            MD IQELVRKVVRQCASRG  VSEVLAAFV RTVI+KPG + Q L++L+SPL+ EG+ DL+DRSVDRLLE DSPSLETIKMQV  DSSYITEEE L+N +QRR++RL+EMQRTI TMRPKDGADFDALTALHRQIFSYLLRH SD+S++GRGVEREVAAALESVFPRISLKAFINL +EEKYAQLDELANIVLGIRVFNQHIGKGGVNIP+PEQEA  LL  +   LS+E+E+AQ TC +LQ+IIVHS L  PQGVT +MLSRWKDEL N+RQYLSYLQSLQEDM VS RKVG LR+TI S M DL++LVGNRASVPKE VYPKFYEIA  WTALY EYKVI GRTRTT VLR F +SYTP++R GM+ Q+G  +ALEE+A AAEAAV +T    +          L      K  + E + GD    +  +P  +P     A +    +D ++E+PVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRY+NRFFVFAH+VAI+TFM +P++F++  L+RAV SPELIHLLRLQ++FP TCITRMLQG    NGK R    L  PEKR+AGT+TP+HF++K ++  YHWNEWVLRRRALQVANLRNCVTKSQQT+ SHFRR ND QVYL RAKHTQTNR+SG+KPP+HVQYF GE
Sbjct:    1 MDEIQELVRKVVRQCASRGVTVSEVLAAFVARTVIQKPGLNGQALFSLNSPLTQEGLGDLIDRSVDRLLEVDSPSLETIKMQVAVDSSYITEEEGLMNSHQRRTARLREMQRTIATMRPKDGADFDALTALHRQIFSYLLRHASDDSRLGRGVEREVAAALESVFPRISLKAFINLGSEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPHPEQEAATLLLDMGRVLSDELEQAQQTCAELQQIIVHSELRHPQGVTADMLSRWKDELTNKRQYLSYLQSLQEDMAVSDRKVGLLRDTIRSEMRDLEELVGNRASVPKEHVYPKFYEIATHWTALYREYKVISGRTRTTDVLRAFRDSYTPTIRGGMDIQSGELSALEENARAAEAAVGITSTNVEPTGATENKPPLGYTNEGKDADEEGRRGDTSDHIEEQP--VPGGQEPAIVR--REDQSIEQPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHEVAISTFMSDPELFLKATLERAVASPELIHLLRLQDSFPETCITRMLQGGKNGNGKVRPSLALAPPEKREAGTDTPVHFIEKCIDPEYHWNEWVLRRRALQVANLRNCVTKSQQTDGSHFRRVNDTQVYLPRAKHTQTNRNSGTKPPRHVQYFGGE 663          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A6H5JGH8_9PHAE (Cilia- and flagella-associated protein 206 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH8_9PHAE)

HSP 1 Score: 673 bits (1737), Expect = 3.950e-235
Identity = 371/587 (63.20%), Postives = 431/587 (73.42%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQ-----------------------------------------------------IFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRD----------LADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAV 1589
            MD IQELVR+VVRQCASRG  VSEVLAAFV RTVI+KPG + Q L++L+SPL+ EG+ DL+DRSVDRLLE DSPSLET+KMQV  DSSYI+EEE L+N +QRR++RL+EMQRTI TMRPKDGADFDALTALHRQ                                                     IFSYLLRH SD+S+VGR VEREVAAALESVFPRISLKAFINL +EEKYAQLDELANIVLGIRVFNQHIGKGG+N+PNPEQEA  LL  +   LS+E+E+AQ TC +LQ++IVHS L  PQGVT +MLSRWKDEL N+RQYLSYLQSLQEDM VS RKV  LR+TI S M DL++LVGNRASVPKE VYPKFYEIA  WTALY EYKVI GRTRTT VLR F +SYTP++R G++ Q+G  +ALEE+A AAEAAV +T    +          L D    K  + E + GD    +  +P    +  PA       +D + E+PVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRY+NRFFVFAHQVA+ TFM +P++F++  L+R +
Sbjct:    1 MDEIQELVRQVVRQCASRGVTVSEVLAAFVARTVIQKPGLNGQALFSLNSPLTQEGLSDLIDRSVDRLLEVDSPSLETMKMQVAVDSSYISEEEGLMNSHQRRTARLREMQRTIATMRPKDGADFDALTALHRQVPLIPTYFYSFTVEMPIVDVNNRKHCVRSYPLSLRCTAAAHLGLGYARGMSMQIFSYLLRHASDDSRVGREVEREVAAALESVFPRISLKAFINLGSEEKYAQLDELANIVLGIRVFNQHIGKGGINVPNPEQEAATLLLDMGRVLSDELEQAQQTCAELQQVIVHSELRHPQGVTADMLSRWKDELTNKRQYLSYLQSLQEDMAVSDRKVSLLRDTIRSEMRDLEELVGNRASVPKEHVYPKFYEIATHWTALYREYKVISGRTRTTDVLRAFRDSYTPTIRGGLDIQSGELSALEENARAAEAAVGITSTNVEPTGATENKPPLGDTNEGKDADEEGRRGDTSDHIEEQPGPGGQ-GPAIVR---REDQSTEQPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHQVAMATFMTDPELFLKATLERFI 583          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A835YXN0_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN0_9STRA)

HSP 1 Score: 635 bits (1639), Expect = 3.800e-219
Identity = 348/665 (52.33%), Postives = 460/665 (69.17%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKP-GHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGR-DLADIGSAK-TTEFEVKTG-----DQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDN-----GKARSKSVLTAPEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFA 1973
            M+ I +L+ ++V+QCA+RG AV EVLAA V RTVIE   G  S PL++LD+PLS EG++ L+D SV RLL  DSP +ET++MQV FD++Y+ EE+ L     RR++RLKE+QR I  ++P+DGADF+ALT +HRQIF+YLL+H  + S+  R VEREVAAALESVFPRISLKAFI L++EEKYAQL+ELA+IV GIR+FN+HIGKGG  +P+ + +A  LL +L   L  EVE+ Q  C + Q++IV  ++H+PQG+T  ++ RWKDEL NRRQYL+YLQS+QED+ +S RKV S+RE +   + DL+QLV N+ASVPKE VYPKF E++ QW AL+ E +V+  R     VLR +  SYT +L   M+       A  E+   AE+     +E   D   +GS + ++    K G     D         +D+   +    M+      A ++PV+LSIESTPEFMQLPLE+QGFC WTIV R+GLLLPG+PELGV R++N  +VFAH+VA   F  +P+  V G L+RA+ SPELIHLLRLQ++FP+  I RML+GD      G   +K    A  K DAGTETP+HF DK ++  Y WNEW LRR+ALQ+ANLR C T +QQT+ SHFRR N  QV+L R   TQT RSSG+ PP+ V++ A
Sbjct:    1 MEEIDKLIAEIVQQCAARGIAVPEVLAALVARTVIETANGAHSMPLFSLDAPLSSEGINKLIDVSVARLLADDSPPMETLRMQVAFDTTYVREEKELEVKASRRAARLKELQRAIVQLKPRDGADFEALTTMHRQIFTYLLKHAHEGSEADRTVEREVAAALESVFPRISLKAFITLTSEEKYAQLEELASIVFGIRLFNKHIGKGGNRVPDADADAAALLAELSAELLVEVEQTQIACRRYQDVIVLMYMHQPQGLTIEVVDRWKDELANRRQYLAYLQSVQEDVIISERKVRSVRERLARELSDLRQLVENKASVPKEHVYPKFDEVSTQWRALFRELQVLRSREAAYAVLRKYKASYTSTLVESMDV----VRAAYEEQAPAESKDAPAIEAHSDSKSVGSGRGSSRGSNKPGSSAQQDDPRTAAVTAADVTPIASTDEMIDTAAARAKDKPVRLSIESTPEFMQLPLEFQGFCPWTIVNRRGLLLPGRPELGVQRWRNAHYVFAHKVAAEAFQKSPEALVHGVLERAMQSPELIHLLRLQDSFPNVSIMRMLRGDGLLADGGAGAAKG--PAAVKCDAGTETPLHFADKNIDHSYSWNEWTLRRKALQIANLRKCATTAQQTDDSHFRRENTTQVWLPRLTGTQTMRSSGNNPPRQVRFTA 659          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN)

HSP 1 Score: 504 bits (1297), Expect = 4.750e-163
Identity = 301/678 (44.40%), Postives = 396/678 (58.41%), Query Frame = 3
Query:   48 VVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLR----------HPS------DESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALA---------AEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRML--QGDNGK--------ARSKSVLTAPEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            + + CA RG  V  VLAAF+ RT++E    S   L++ +  L+ EGVD L+  S+ RL E D+PSLETIKMQV FDS+Y+  EE L    + R  + +E+ R I  ++P+   DF+ LTAL+RQIF+YLL            PS      D   + R VERE+AAALESVFPRI LK+F+ LS+EEK  QL+ELA IV GIR+FN+  GKGG  + + E      +  L  +L  E  +     ++ QE +V+ HL +P GV P  L RW  EL NRRQY +YL SL ED   SAR+V   RE   + MD+LQ LVG RASVPKE VYPKF  IA  W AL  E +V+  R  T   L  F  SY  ++  G          LE  A           AE A  V+  G D A    A   E     G   +    E  D    + A   LP       + PV+LS+E+TPEFMQLPLEYQGFC WT+  R GLLLPGKP LGV++Y+   +VFAH VA+  FMD P+   +G + +A L+PEL+HLLRLQ+++P T I ++L  +   GK        A +K++L     RDA T+TP+HFV+K ++  Y WN+W LRRRAL++A L++C T SQQT+ SHFRR N  QV+L +   TQ+ +   + PP  +QYF G
Sbjct:  345 ICQGCAGRGQRVPAVLAAFIARTILE----SDPLLFSPEKELTSEGVDTLIRMSIARLCEKDAPSLETIKMQVAFDSTYVRFEEELDKSRKAREEKKRELVRAILAVKPRGSTDFETLTALYRQIFTYLLHVSRGGSGLPGAPSNTTAAEDPGSMERAVEREIAAALESVFPRIGLKSFVQLSSEEKRLQLEELARIVTGIRLFNREGGKGGAGLDHVEDAVATTVSDLRDALDAETAEQHDLALRYQETLVYCHLRQPPGVAPAQLERWAQELANRRQYGAYLTSLAEDAAASARRVQVHRERFATEMDELQALVGGRASVPKEHVYPKFDAIATAWFALDDELRVVESRVATLEELHQFRESY--NMTCGANHPVYRAARLESHAKPDGGGAVDDEAEMAEAVSKLGGDQAAAAVAAPVE-----GAPSAASAAEDDD----AKALDDLPTGARDNADVPVRLSVETTPEFMQLPLEYQGFCGWTVANRHGLLLPGKPALGVVKYRGSCYVFAHAVALKAFMDAPEAVREGVVAQATLAPELVHLLRLQDSYPGTSIAKILASRAITGKGAEPGQATAVAKALLAPAATRDASTDTPVHFVEKHIDPAYEWNDWALRRRALRLAQLKHCATTSQQTDESHFRRNNTTQVFLPKIASTQSRKDGETNPPVRIQYFKG 1007          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A1V9Z5I6_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5I6_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 3.210e-155
Identity = 274/657 (41.70%), Postives = 399/657 (60.73%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVT-PNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQE-SVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDNGKARSKSVLT--APEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            MD I +++  V+ +C   G  VS+ LAAFV RT++++    +  +++L+  +   G+  L ++SVD LL+ DSPSLETIKMQ+ FD  Y+  EE +      +  ++  + R+I  ++P    DF+ LT L+RQIF+ L+ H + +    R +EREVAAALESVFPRI LK+F+++S E+K  QL ELANIV GIR+FN+ IGKGG  I        E ++ +   +S+EVE+   TC    E+++H H +  Q    P  + RW++EL N+RQ+LSY+QSL ED+ VS+ K+  L  T  + ++ L+ LVG+R+S+PK QVYP F  ++  W  L  E++++  R+R+   L  F +SYT +L    E+            L A+ A     E  +  +        F + T        +GE ++   +  A   L +E  ++   PV++S++STPEFMQLPLEYQG+C WTIV+R GLLLPG P LGVI+Y N + VF ++ A+N FM NPD ++       V  PELI+LLRLQE+FP T +  +++  N K +   +L   A  K DA T TP+HFV+K ++  Y WNEW LRRRAL+VANLRNC T S QT +S+FR  N+ QV+L +   TQT    G+ P + V YFAG
Sbjct:    1 MDRIGKVIGDVIARCKYEGVVVSDTLAAFVCRTIVQE----NTNVFSLEGEIDAAGITQLTEKSVDMLLQKDSPSLETIKMQLDFDLCYVKYEEEVEKAQTLKDKKVTNLHRSIVALQPSGTGDFETLTTLYRQIFTLLMVHANADKANDRNIEREVAAALESVFPRIGLKSFVSMSPEDKKFQLKELANIVGGIRLFNREIGKGGAGITLSLDTIRENVKSISQLVSQEVEEVNQTCTDYTEVLLHIHHYNVQVTGGPVNVKRWQEELNNKRQFLSYMQSLHEDIDVSSEKIQRLIATFENELNTLKSLVGSRSSLPKGQVYPVFEALSKAWEELGLEHQLLLARSRSIKALMEFKDSYTRTLAQQSEW-----------ILKAKRAGMPPQE--EWFEHSEPDNQIFALSTATNAIQKDSGEATEGNFYKAANNNLYVEGTVSESGPVRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYHNAYHVFVNEHALNDFMANPDKYIAAVHAYVVHKPELIYLLRLQESFPETSMASLMKLLNNKTQVHPLLAPHAVLKVDASTSTPVHFVEKNIDVNYEWNEWSLRRRALRVANLRNCKTVSAQTTLSNFRANNETQVWLPQDNTTQTGHDKGTNPTKTVTYFAG 640          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A8J2WV84_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WV84_9STRA)

HSP 1 Score: 470 bits (1209), Expect = 3.490e-154
Identity = 282/682 (41.35%), Postives = 385/682 (56.45%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLL-------------RHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQ-----------GDNGKARSKSV-----LTAPEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            M+ I ++V  + + CA +G  V +VLAAF+ RT++E    S   L++ +  LS EG++ LV   + R  + D P+LETIKMQV FDS+Y+  EE L    + R+++ K++ R+I  +RPK G DF+ LTAL+RQIFSYL                 +D + V R VERE+AAALESVFPRI LK+F+ L AEEK  QL+ELA IV GIR+FN+  GKGG  + + E      +  L  +L  EV +    C + QE +V+ HL +P   T   L RW  EL NRRQY +YL SL ED   SAR+V + R+   S MD+LQ +VG RA+VPKE VYPKF  +AA W AL  E +V+  R      L  F  SY  +L        G  +A+   A          +EG  + D  +    + E            +  DLP+                  PV+LS+E+TPEFMQLPLEYQGFC WT   + GLLLPGKP LGV+RY+   +VFA   A+  F  +P+   QG +  A   PEL+HLLRLQ+ +P T I ++L            G  G+  ++       L  P  +DA  ETP+HFV+K ++  Y +NEW LRRRAL++A L+   T S QT+ S +RR N +QV+L +   TQT + SG++PP  +QY  G
Sbjct:    1 MEEIDDIVTDIAQGCAGKGQRVPKVLAAFIARTILE----SDPVLFSPEKELSNEGIETLVRMGIARCCQKDDPALETIKMQVTFDSTYVRYEEELAQSNEARANKTKDLIRSIIGVRPKGGTDFETLTALYRQIFSYLQFVSRGQGGLDGKGLSQADPAAVERAVERELAAALESVFPRIGLKSFVLLGAEEKRLQLEELARIVTGIRLFNREQGKGGAGLDHVEDAVATTVSDLREALDAEVAEQHEVCTRYQETLVYCHLRKPDEATAENLERWAQELANRRQYCAYLASLAEDAAASARRVAAQRDAFASEMDELQGMVGGRAAVPKEHVYPKFDAVAAAWFALDEELRVVESRVAVLEELHAFRESYAATL--------GPHSAVSRQA---------RLEGPPIQDEAAPSPDKPEXXXX----XXXXDFDDLPQGDEGG-------------PVRLSVETTPEFMQLPLEYQGFCGWTCANKGGLLLPGKPGLGVVRYRGAHYVFASAEALRDFFKDPEGARQGVVAAATKRPELVHLLRLQDQYPGTSIAKILAAAASKRAASRGGVEGQRTAQGXXXXXXLAPPVMKDAACETPLHFVEKNMDPSYEFNEWALRRRALRLAALKKSATTSCQTDASSYRRDNASQVFLPKISSTQTRKESGTQPPLRIQYLQG 644          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A067BWK6_SAPPC (Cilia- and flagella-associated protein 206 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWK6_SAPPC)

HSP 1 Score: 462 bits (1189), Expect = 3.270e-151
Identity = 272/657 (41.40%), Postives = 393/657 (59.82%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNM-LSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVER-PVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDNGKARSKSVLT--APEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            +D I ++V  ++ +C   G  VS+ LAAF+ RT++++  +    ++ LD  +   G+ +L  RSVD LL  DSPSLETIKMQ+ FD  Y+  EE++      +  ++  + ++I  ++P   +DF+ALT L+RQIF+ L+ H   +    R +EREVAAALESVFPRI LK+F+++S ++K  QL ELANIV GIR+FN+ IGKGG  I        + +  +  S++ EV++    C    E+++H H +  Q  +    L RW++EL N+RQ+LSY+QSL ED+ VS+ K+G L  +  + +  L+ LVG+R S+PK QVYP F  ++  W  L  E++++  R+R+   L  F +SYT +L    E+            L A+ A     E              FE    D ++ +    S       AAT    +   AV+  P+++S++STPEFMQLPLEYQG+C WTIV+R GLLLPG P LGVI+Y N + VF ++ A++ FM +PD ++       V  PELI+LLRLQE+FP T +  +++  N KA    +L   A  K DA T TP+HFV+K ++S Y WNEW LRRRAL+VANLRNC T S QT +S+FR   DAQV+L     TQT    G+ P + V YFAG
Sbjct:    2 LDRIGKVVADIIARCKYEGVLVSDTLAAFICRTIVQEDSN----VFCLDGDIDAAGLAELTKRSVDMLLRKDSPSLETIKMQLDFDLCYVKHEEDVEKAAAMKEKKIANLHKSIVALQPSGTSDFEALTTLYRQIFTMLMVHADADKANDRTIEREVAAALESVFPRIGLKSFVSMSPDDKKFQLKELANIVGGIRLFNKEIGKGGAGIVLSIDTIRDNVASISKSVALEVDEVNQICTDYTEVLLHIHHYNAQSASGVANLKRWQEELNNKRQFLSYMQSLHEDIDVSSDKIGRLVTSFETELHTLKSLVGSRTSLPKGQVYPIFEALSKAWDELEVEHQLLLARSRSIKALMEFKDSYTRTLGQQSEW-----------ILKAKRAGMPPQE------------EWFEHSEPDNQAYLVSSASTASHKDSAATAHG-DASAAVDNVPIRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYHNAYHVFVNERALSDFMASPDTYISAVHAFVVHRPELIYLLRLQESFPDTSMASLMKLLNNKAHVHPLLAPHAVLKVDASTSTPVHFVEKNIDSTYDWNEWSLRRRALRVANLRNCKTTSAQTTLSNFRSDVDAQVWLPAENATQTGTDRGTNPTKTVTYFAG 630          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A485LQG7_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQG7_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 5.820e-151
Identity = 270/664 (40.66%), Postives = 391/664 (58.89%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIP---NPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQ-GVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEF-----QAGSTTALEEDALAAEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDNGKARSKSVLT--APEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            MD I ++V  ++ +C   G  VS+ LAAF+ RT +++  +     + LD  +  +GV  L  RSV  LL+ DSPSLETIKMQ+ FD  Y+  EE +  F   ++ ++  + R+I  ++P    DF+ LT L+RQIF+ L+ H   E    R +EREVAAALESVFPRI LK+F++++ ++K  QL ELA+IV GIR+FN+ IGKGG  I     P     + +  +    SEEVE+A   C +  E+++H H +  +  VT   + RW++EL N+RQ+LSYLQSL ED+ VS  K+  L  +  + ++ L+ LVG+R S+PK QVYP F  +A  W  L  E++++  R+R+   L  F +S+T +L    E+     +AG     +ED      +     E +    +G+    E +  T D  +                           + PV++S++STPEFMQLPLEYQG+C WTIV+R GLLLPG P LGVI+Y+N + VF ++ A++ FM NP ++V       V  PELI+LLRLQE+FP T +  +++  N +     +L   A +K DAGT TPIHFV+K L+  Y WNEW LRRRA+++ANLRN  T S QT +S+FR+  D QV+L     TQT    G+ P + + YFAG
Sbjct:    1 MDRISKIVADIIARCKYEGVEVSDTLAAFICRTAVQEDSNR----FCLDGDVDSDGVAALTQRSVTSLLQKDSPSLETIKMQLDFDLCYVKHEEEVEKFRAAKAKKISNLHRSIVLLQPSGTGDFETLTTLYRQIFTLLMVHADAEKSGDRNIEREVAAALESVFPRIGLKSFVSMAPDDKKFQLKELASIVGGIRLFNKEIGKGGAGISLSLGPSHTIRDNVTSVSKLASEEVEEANQVCTEYTEVLLHIHHYNVKDNVTAERVKRWQEELNNKRQFLSYLQSLYEDIDVSTEKISRLTSSFDNELNTLKALVGSRTSLPKGQVYPVFEALAKAWDELEAEHQLLLARSRSIKSLMEFKDSFTRTLSPQSEWILKAKRAGMPP--QEDWFEHSES-----ENQPKNALGAVTRHEAKEGTADDSN-------------------------GNDVPVRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYKNAYHVFVNERALDEFMANPQLYVSAVHDFVVRKPELIYLLRLQESFPDTSMASLMKMTNNRTHVHPLLAPNAVQKVDAGTSTPIHFVEKNLDVNYEWNEWSLRRRAIKIANLRNYKTVSAQTTLSNFRKDVDQQVWLPTDNTTQTGHDKGTNPTKTITYFAG 628          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A1V9Z275_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z275_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 1.300e-149
Identity = 271/659 (41.12%), Postives = 393/659 (59.64%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAV-ELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVT-PNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRDLADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAV--ERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDNGKARSKSVLT--APEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAG 1976
            +D I ++V  ++ +C   G  VS+ LAAF+ RT++++    +  ++ LD  +   G+++L  RSVD LL  DSPSLETIKMQ+ FD  Y    E +      +  ++  + R+I  ++P   +DF+ LT L+RQIF+ L+ H   +    R +EREVAAALESVFPRI LK+F+++S ++K  QL ELANIV GIR+FN+ IGKGG  I     + + + +  +  S+ +EVE A  TC    E+++H H +  Q  +  + L RW++EL N+RQ+LSY+QSL ED+ VS+ K+  L  T  + +  L+ LVG+R S+PK QVYP F  +A  W  L  E++++  R+R+   L  F +SYT +L    E+            L A+ A     E              FE    D ++++T   +   R    A       D A   + P+++S++STPEFMQLPLEYQG+C WTIV+R GLLLPG P LGVI+Y+N + VF ++ A+  FM +PD ++       V  PELI+LLRLQE+FP T +  +++  N K     +L   A  K DA T TP+HFVDK ++  Y WNEW LRRRAL+VANLRNC T S QT +S+FR+  D+QV+L +   +QT    G+ P + V YFAG
Sbjct:    2 LDRIGKVVGDIIARCKYEGVVVSDTLAAFICRTIVQE----NTNVFCLDGDIDAAGINELTQRSVDMLLRKDSPSLETIKMQLDFDLCY----EEVEKAQAMKDKKIANLHRSIVALQPSGTSDFETLTTLYRQIFTLLMVHADADKANDRNIEREVAAALESVFPRIGLKSFVSMSPDDKKFQLKELANIVGGIRLFNREIGKGGAGITLSLADTIRDNVTSIAKSVDQEVEDANQTCTDYTEVLLHVHHYNAQSASGASALKRWQEELNNKRQFLSYMQSLHEDIDVSSDKIQRLITTFETELSTLKSLVGSRTSLPKGQVYPIFEALAKAWDELDVEHQLLLARSRSIKALMEFKDSYTRTLGPQSEW-----------ILKAKRAGMPPQE------------EWFEHSEPDNQALLTSSSASTGRKDSDAAA---HDDGAAPDDVPIRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYRNAYHVFVNERALGDFMASPDKYINAVHSFVVHRPELIYLLRLQESFPDTSMASLMKLLNNKTHVHPLLAPHAVLKVDASTSTPVHFVDKNIDVNYDWNEWSLRRRALKVANLRNCKTVSVQTTLSNFRKDVDSQVWLPQNNASQTGHDKGTNPTKTVTYFAG 626          
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Match: A0A6G0W5D4_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5D4_9STRA)

HSP 1 Score: 452 bits (1162), Expect = 9.360e-147
Identity = 278/683 (40.70%), Postives = 390/683 (57.10%), Query Frame = 3
Query:   18 MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDSPLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFYQRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVGRGVEREVAAALESVFPRIS-------------------LKAFINLSAEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHLHRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETITSLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTGVLRTFCNSYTPSLRSGMEF--QAGSTTALEEDALAAEAAVCVTMEGRD---LADIGSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFAHQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQGDNGKARSKSV--LTAP---EKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQVANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQYFAGE 1979
            MD +Q++V  +V +C   G  VS+ LAAFV RTV+    H     + LD  +  +G+ DL  RSV  LL+ DSP+LETIKMQ+ FD  Y+  EE +      ++ ++  + R+I  ++P   +DFD LT L+RQIF+ L+ H   E    R +EREVAAALESVFPRI                    LK+F+ +S ++K  QL ELA+IV GIR+FN+ IGKGG  I        + + ++    SEE+E+A   C +  E+++H H H    V    + RW++EL N+RQ+LSYLQSL ED+ VS  K+  L  T  + +  L+ LVG R S+PK QVYP F  ++  W  L +E++++  R+R+   L  F +S+T +L    E+  QA  T    +D   A+    + M        A   S+  T  + K  D             RH               + PV++S+ESTPEFMQLPLEYQG+C WTIV+R GLLLPG P LGVI+++N + VF ++ A++ FM NP  +V+      V  PELI+LLRLQE+FP T +  +++  +  A    V  L AP   EK DA T TP+HFV+K L+  Y WNEW LRRRA+Q+ANLRN  T S QT +S+FR+  D QV+L     TQT    G+ P + + YFAG+
Sbjct:    1 MDRMQKIVADIVARCKYEGVDVSDTLAAFVCRTVV----HEDTNRFCLDGDVDADGIADLTARSVTVLLQKDSPALETIKMQLDFDLCYVKHEEEVDKVRAVKAKKIANLHRSIALLQPNGTSDFDTLTTLYRQIFTLLMVHADAEKSNDRNIEREVAAALESVFPRIGWVFFLPRSRLSYVARALCRLKSFVTMSGDDKKLQLKELASIVGGIRLFNREIGKGGAGITLTLDTIHDHVAQVTRLASEEMEEASQVCTEYTEVLLHMH-HAKHNVPRERIDRWQEELNNKRQFLSYLQSLYEDIDVSTEKIRRLIATFDTELSALKALVGARTSLPKGQVYPAFEALSKAWDELDNEHQLLLARSRSIKALMQFKDSFTRTLSPQSEWILQAKRTGMPPQDEWFADNQQSLEMAAPSKPPTATSSSSHGTHHDAKHQDDNES---------RHD--------------DVPVRMSVESTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQFRNAYHVFVNERALDAFMANPAWYVESVHDFVVRKPELIYLLRLQESFPDTSMASLMRWTSNPAHRAHVHPLLAPHAVEKVDASTATPVHFVEKNLDVNYEWNEWSLRRRAVQIANLRNYKTVSVQTTLSNFRKDVDQQVWLPADHATQTGHDKGTNPTKTIAYFAGK 655          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2336.6301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR55_ECTSI0.000e+071.66Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A6H5JGH8_9PHAE3.950e-23563.20Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A835YXN0_9STRA3.800e-21952.33Cilia- and flagella-associated protein 206 n=1 Tax... [more]
F0Y6B2_AURAN4.750e-16344.40Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A1V9Z5I6_9STRA3.210e-15541.70Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A8J2WV84_9STRA3.490e-15441.35Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A067BWK6_SAPPC3.270e-15141.40Cilia- and flagella-associated protein 206 n=2 Tax... [more]
A0A485LQG7_9STRA5.820e-15140.66Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A1V9Z275_9STRA1.300e-14941.12Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A6G0W5D4_9STRA9.360e-14740.70Cilia- and flagella-associated protein 206 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2336contigH-paniculata_contig2336:14705..17323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score921.0
Seed ortholog evalue3.1e-265
Seed eggNOG ortholog2880.D7FR55
Preferred nameCFAP206
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001534,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032838,GO:0032991,GO:0035082,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.cilium movement
EggNOG OGs2CN2C@1,2QTGJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1979
Cds size1962
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2336.6301.1prot_H-paniculata_contig2336.6301.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2336 14722..17323 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929662.3202527-UTR-H-paniculata_contig2336:14704..147211622929662.3202527-UTR-H-paniculata_contig2336:14704..14721Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2336 14705..14721 +
1691480956.5484395-UTR-H-paniculata_contig2336:14704..147211691480956.5484395-UTR-H-paniculata_contig2336:14704..14721Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2336 14705..14721 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929662.3312585-CDS-H-paniculata_contig2336:14721..148201622929662.3312585-CDS-H-paniculata_contig2336:14721..14820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 14722..14820 +
1691480956.5578296-CDS-H-paniculata_contig2336:14721..148201691480956.5578296-CDS-H-paniculata_contig2336:14721..14820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 14722..14820 +
1622929662.3453393-CDS-H-paniculata_contig2336:15039..153421622929662.3453393-CDS-H-paniculata_contig2336:15039..15342Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 15040..15342 +
1691480956.5668743-CDS-H-paniculata_contig2336:15039..153421691480956.5668743-CDS-H-paniculata_contig2336:15039..15342Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 15040..15342 +
1622929662.355776-CDS-H-paniculata_contig2336:15763..173231622929662.355776-CDS-H-paniculata_contig2336:15763..17323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 15764..17323 +
1691480956.5765734-CDS-H-paniculata_contig2336:15763..173231691480956.5765734-CDS-H-paniculata_contig2336:15763..17323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2336 15764..17323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2336.6301.1

>prot_H-paniculata_contig2336.6301.1 ID=prot_H-paniculata_contig2336.6301.1|Name=mRNA_H-paniculata_contig2336.6301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=654bp
MDGIQELVRKVVRQCASRGFAVSEVLAAFVIRTVIEKPGHSSQPLYNLDS
PLSPEGVDDLVDRSVDRLLESDSPSLETIKMQVGFDSSYITEEENLINFY
QRRSSRLKEMQRTITTMRPKDGADFDALTALHRQIFSYLLRHPSDESKVG
RGVEREVAAALESVFPRISLKAFINLSAEEKYAQLDELANIVLGIRVFNQ
HIGKGGVNIPNPEQEAVELLRKLEISLSEEVEKAQSTCVQLQEIIVHSHL
HRPQGVTPNMLSRWKDELINRRQYLSYLQSLQEDMTVSARKVGSLRETIT
SLMDDLQQLVGNRASVPKEQVYPKFYEIAAQWTALYHEYKVIGGRTRTTG
VLRTFCNSYTPSLRSGMEFQAGSTTALEEDALAAEAAVCVTMEGRDLADI
GSAKTTEFEVKTGDQESVVTGEPSDLPRHSPAATMLPLEKDMAVERPVKL
SIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYQNRFFVFA
HQVAINTFMDNPDVFVQGALQRAVLSPELIHLLRLQEAFPHTCITRMLQG
DNGKARSKSVLTAPEKRDAGTETPIHFVDKKLESGYHWNEWVLRRRALQV
ANLRNCVTKSQQTNMSHFRRANDAQVYLHRAKHTQTNRSSGSKPPQHVQY
FAGE
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mRNA from alignment at H-paniculata_contig2336:14705..17323+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2336.6301.1 ID=mRNA_H-paniculata_contig2336.6301.1|Name=mRNA_H-paniculata_contig2336.6301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2619bp|location=Sequence derived from alignment at H-paniculata_contig2336:14705..17323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCAAAAGAGGCACACATGGACGGAATACAAGAGCTTGTGCGAAAGGTA GTAAGACAATGCGCCTCTCGAGGATTCGCTGTTTCAGAAGTACTGGCTGC GTTTGTCATAAGGACGGTGAGTTATTTGTGACCCCCTCATTGTACATGTA ACAGCTACCAATAATCGCATTAAGTTCAACGAGACACATGCTTACAGATA GACGTACACAACAGCAACATTTATTACAGCTATATGTGTTCCACAACGGC CACATGTCCTTCTCCGCCTGTCACGTTCCACCTCTGATCAATCGAGCCTT TCTGACTTTGATCCAACACCTATGATAATAATCAGGTGATAGAAAAGCCA GGACACAGCAGCCAGCCGCTGTATAATCTAGACAGTCCACTGAGTCCAGA AGGAGTGGACGACCTAGTCGATCGAAGTGTAGACAGGTTGCTCGAGTCAG ATTCCCCATCGCTGGAAACGATCAAGATGCAGGTTGGCTTTGACTCGAGC TACATCACTGAGGAGGAGAATCTTATTAACTTTTACCAGCGGCGAAGCTC ACGTTTGAAGGAAATGCAAAGGACTATAACAACCATGAGGCCAAAGGATG GCGCTGATTTTGACGCACTGACAGCTCTTCACCGGCAGGTGCATTGCATC CCATAGTTGTGCCCCTCGTCAGACGGACGGAGAGCGGGAATGTATCCACT GCTAAGTCGCATGTGCAGGTTGCAATCAGAAATGCTGTTGAATTATATGT ACTCGATAGAGCTTCCTACTCCCTCCAATAGGGCCTACTCTTTACGGAGC GGGTCGTGAAAAACCCGCACTCAAATCGAGAATCAAGTGTAATCTTCGAG TTACAACTTGAACGACAAATGCAAGTACCCCTCCCACGCACCCCTTTTGG ATTTGGAAATTGCTGATAACTATGTCGGGTTATAGCCATGATTGGCCATC GGAAATCGCGTTGACAGGAACAAAGTTCTATCCTCCCGACGACGCGTGGT CTACGGTCTAACTACTACGGCGTGCAAAACATGAGCAACCCCCTGTTTCG GCCCCACAGATATTTTCATATCTACTTCGTCACCCCAGTGACGAGAGTAA GGTGGGGCGAGGAGTCGAGCGAGAGGTGGCGGCAGCACTTGAGAGCGTTT TTCCTCGCATAAGCCTGAAAGCATTCATCAACTTGAGCGCCGAGGAAAAA TACGCTCAACTGGACGAACTCGCAAATATTGTGCTTGGTATTCGGGTGTT CAACCAGCACATCGGCAAAGGAGGCGTGAATATCCCTAACCCTGAACAGG AGGCCGTTGAGCTATTGCGAAAGCTTGAAATCTCGCTATCCGAAGAAGTG GAGAAGGCTCAGAGCACCTGTGTACAACTTCAGGAAATAATTGTGCACAG CCATTTGCACCGACCTCAAGGGGTCACACCCAATATGCTCAGCCGATGGA AGGATGAGCTCATCAACCGTCGTCAGTATTTGTCGTATCTACAGAGCTTG CAAGAAGATATGACGGTTTCGGCACGCAAGGTTGGCTCGCTGCGCGAAAC TATTACATCCCTAATGGATGATCTACAACAGCTAGTTGGTAACCGTGCTT CTGTGCCCAAGGAGCAAGTATATCCCAAGTTCTACGAAATCGCTGCGCAG TGGACAGCTCTCTACCATGAATACAAAGTGATCGGCGGACGTACCAGAAC CACGGGAGTGCTGCGGACGTTCTGTAACTCATACACGCCTTCTCTCCGTA GTGGAATGGAATTTCAAGCTGGTAGCACCACAGCATTGGAGGAAGATGCG CTTGCAGCTGAAGCCGCTGTTTGTGTGACCATGGAAGGTAGAGATCTGGC TGACATAGGGTCAGCAAAAACAACGGAATTTGAAGTGAAAACCGGTGATC AAGAGAGCGTTGTCACTGGCGAACCCAGCGACTTACCCCGACATAGTCCA GCGGCGACAATGTTACCCCTTGAAAAGGACATGGCGGTAGAGCGTCCTGT AAAATTGTCGATTGAATCTACGCCGGAGTTCATGCAGCTGCCCCTGGAAT ACCAGGGTTTTTGCTCATGGACCATTGTGAAGAGGCAAGGGCTGCTTCTC CCAGGAAAGCCTGAGCTGGGCGTAATTCGTTACCAGAATAGGTTTTTTGT TTTTGCCCATCAGGTAGCGATCAACACATTCATGGATAATCCCGACGTTT TCGTTCAGGGAGCCCTACAGCGCGCAGTACTCTCCCCGGAGTTGATTCAC CTGCTGCGTCTTCAGGAAGCATTTCCGCACACATGTATTACTCGCATGCT GCAAGGAGACAATGGCAAGGCTCGCTCGAAGTCCGTCTTGACTGCCCCTG AGAAACGCGATGCTGGCACCGAGACCCCGATCCATTTTGTCGACAAAAAA CTGGAGTCGGGGTACCATTGGAACGAATGGGTACTCAGGCGGCGGGCTCT CCAAGTTGCCAACTTGCGAAATTGTGTCACAAAATCGCAACAAACAAATA TGTCTCACTTCCGGAGAGCCAACGACGCCCAAGTTTATCTACATCGCGCC AAGCACACTCAAACCAACAGGAGTAGCGGCAGCAAGCCACCGCAACATGT CCAGTACTTTGCAGGTGAA
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Coding sequence (CDS) from alignment at H-paniculata_contig2336:14705..17323+

>mRNA_H-paniculata_contig2336.6301.1 ID=mRNA_H-paniculata_contig2336.6301.1|Name=mRNA_H-paniculata_contig2336.6301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3924bp|location=Sequence derived from alignment at H-paniculata_contig2336:14705..17323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGGAATACAAGAGCTTGTGCGAAAGGTAGTAAGACAATGCGCCTC
TCGAGGATTCGCTGTTTCAGAAGTACTGGCTGCGTTTGTCATAAGGACGA
TGGACGGAATACAAGAGCTTGTGCGAAAGGTAGTAAGACAATGCGCCTCT
CGAGGATTCGCTGTTTCAGAAGTACTGGCTGCGTTTGTCATAAGGACGGT
GATAGAAAAGCCAGGACACAGCAGCCAGCCGCTGTATAATCTAGACAGTC
CACTGAGTCCAGAAGGAGTGGACGACCTAGTCGATCGAAGTGTAGACAGG
TTGCTCGAGTCAGATTCCCCATCGCTGGAAACGATCAAGATGCAGGTTGG
CTTTGACTCGAGCTACATCACTGAGGAGGAGAATCTTATTAACTTTTACC
AGCGGCGAAGCTCACGTTTGAAGGAAATGCAAAGGACTATAACAACCATG
AGGCCAAAGGATGGCGCTGATTTTGACGCACTGACAGCTCTTCACCGGCA
GGTGATAGAAAAGCCAGGACACAGCAGCCAGCCGCTGTATAATCTAGACA
GTCCACTGAGTCCAGAAGGAGTGGACGACCTAGTCGATCGAAGTGTAGAC
AGGTTGCTCGAGTCAGATTCCCCATCGCTGGAAACGATCAAGATGCAGGT
TGGCTTTGACTCGAGCTACATCACTGAGGAGGAGAATCTTATTAACTTTT
ACCAGCGGCGAAGCTCACGTTTGAAGGAAATGCAAAGGACTATAACAACC
ATGAGGCCAAAGGATGGCGCTGATTTTGACGCACTGACAGCTCTTCACCG
GCAGATATTTTCATATCTACTTCGTCACCCCAGTGACGAGAGTAAGGTGG
GGCGAGGAGTCGAGCGAGAGGTGGCGGCAGCACTTGAGAGCGTTTTTCCT
CGCATAAGCCTGAAAGCATTCATCAACTTGAGCGCCGAGGAAAAATACGC
TCAACTGGACGAACTCGCAAATATTGTGCTTGGTATTCGGGTGTTCAACC
AGCACATCGGCAAAGGAGGCGTGAATATCCCTAACCCTGAACAGGAGGCC
GTTGAGCTATTGCGAAAGCTTGAAATCTCGCTATCCGAAGAAGTGGAGAA
GGCTCAGAGCACCTGTGTACAACTTCAGGAAATAATTGTGCACAGCCATT
TGCACCGACCTCAAGGGGTCACACCCAATATGCTCAGCCGATGGAAGGAT
GAGCTCATCAACCGTCGTCAGTATTTGTCGTATCTACAGAGCTTGCAAGA
AGATATGACGGTTTCGGCACGCAAGGTTGGCTCGCTGCGCGAAACTATTA
CATCCCTAATGGATGATCTACAACAGCTAGTTGGTAACCGTGCTTCTGTG
CCCAAGGAGCAAGTATATCCCAAGTTCTACGAAATCGCTGCGCAGTGGAC
AGCTCTCTACCATGAATACAAAGTGATCGGCGGACGTACCAGAACCACGG
GAGTGCTGCGGACGTTCTGTAACTCATACACGCCTTCTCTCCGTAGTGGA
ATGGAATTTCAAGCTGGTAGCACCACAGCATTGGAGGAAGATGCGCTTGC
AGCTGAAGCCGCTGTTTGTGTGACCATGGAAGGTAGAGATCTGGCTGACA
TAGGGTCAGCAAAAACAACGGAATTTGAAGTGAAAACCGGTGATCAAGAG
AGCGTTGTCACTGGCGAACCCAGCGACTTACCCCGACATAGTCCAGCGGC
GACAATGTTACCCCTTGAAAAGGACATGGCGGTAGAGCGTCCTGTAAAAT
TGTCGATTGAATCTACGCCGGAGTTCATGCAGCTGCCCCTGGAATACCAG
GGTTTTTGCTCATGGACCATTGTGAAGAGGCAAGGGCTGCTTCTCCCAGG
AAAGCCTGAGCTGGGCGTAATTCGTTACCAGAATAGGTTTTTTGTTTTTG
CCCATCAGGTAGCGATCAACACATTCATGGATAATCCCGACGTTTTCGTT
CAGGGAGCCCTACAGCGCGCAGTACTCTCCCCGGAGTTGATTCACCTGCT
GCGTCTTCAGGAAGCATTTCCGCACACATGTATTACTCGCATGCTGCAAG
GAGACAATGGCAAGGCTCGCTCGAAGTCCGTCTTGACTGCCCCTGAGAAA
CGCGATGCTGGCACCGAGACCCCGATCCATTTTGTCGACAAAAAACTGGA
GTCGGGGTACCATTGGAACGAATGGGTACTCAGGCGGCGGGCTCTCCAAG
TTGCCAACTTGCGAAATTGTGTCACAAAATCGCAACAAACAAATATGTCT
CACTTCCGGAGAGCCAACGACGCCCAAGTTTATCTACATCGCGCCAAGCA
CACTCAAACCAACAGGAGTAGCGGCAGCAAGCCACCGCAACATGTCCAGT
ACTTTGCAGGTGAAATATTTTCATATCTACTTCGTCACCCCAGTGACGAG
AGTAAGGTGGGGCGAGGAGTCGAGCGAGAGGTGGCGGCAGCACTTGAGAG
CGTTTTTCCTCGCATAAGCCTGAAAGCATTCATCAACTTGAGCGCCGAGG
AAAAATACGCTCAACTGGACGAACTCGCAAATATTGTGCTTGGTATTCGG
GTGTTCAACCAGCACATCGGCAAAGGAGGCGTGAATATCCCTAACCCTGA
ACAGGAGGCCGTTGAGCTATTGCGAAAGCTTGAAATCTCGCTATCCGAAG
AAGTGGAGAAGGCTCAGAGCACCTGTGTACAACTTCAGGAAATAATTGTG
CACAGCCATTTGCACCGACCTCAAGGGGTCACACCCAATATGCTCAGCCG
ATGGAAGGATGAGCTCATCAACCGTCGTCAGTATTTGTCGTATCTACAGA
GCTTGCAAGAAGATATGACGGTTTCGGCACGCAAGGTTGGCTCGCTGCGC
GAAACTATTACATCCCTAATGGATGATCTACAACAGCTAGTTGGTAACCG
TGCTTCTGTGCCCAAGGAGCAAGTATATCCCAAGTTCTACGAAATCGCTG
CGCAGTGGACAGCTCTCTACCATGAATACAAAGTGATCGGCGGACGTACC
AGAACCACGGGAGTGCTGCGGACGTTCTGTAACTCATACACGCCTTCTCT
CCGTAGTGGAATGGAATTTCAAGCTGGTAGCACCACAGCATTGGAGGAAG
ATGCGCTTGCAGCTGAAGCCGCTGTTTGTGTGACCATGGAAGGTAGAGAT
CTGGCTGACATAGGGTCAGCAAAAACAACGGAATTTGAAGTGAAAACCGG
TGATCAAGAGAGCGTTGTCACTGGCGAACCCAGCGACTTACCCCGACATA
GTCCAGCGGCGACAATGTTACCCCTTGAAAAGGACATGGCGGTAGAGCGT
CCTGTAAAATTGTCGATTGAATCTACGCCGGAGTTCATGCAGCTGCCCCT
GGAATACCAGGGTTTTTGCTCATGGACCATTGTGAAGAGGCAAGGGCTGC
TTCTCCCAGGAAAGCCTGAGCTGGGCGTAATTCGTTACCAGAATAGGTTT
TTTGTTTTTGCCCATCAGGTAGCGATCAACACATTCATGGATAATCCCGA
CGTTTTCGTTCAGGGAGCCCTACAGCGCGCAGTACTCTCCCCGGAGTTGA
TTCACCTGCTGCGTCTTCAGGAAGCATTTCCGCACACATGTATTACTCGC
ATGCTGCAAGGAGACAATGGCAAGGCTCGCTCGAAGTCCGTCTTGACTGC
CCCTGAGAAACGCGATGCTGGCACCGAGACCCCGATCCATTTTGTCGACA
AAAAACTGGAGTCGGGGTACCATTGGAACGAATGGGTACTCAGGCGGCGG
GCTCTCCAAGTTGCCAACTTGCGAAATTGTGTCACAAAATCGCAACAAAC
AAATATGTCTCACTTCCGGAGAGCCAACGACGCCCAAGTTTATCTACATC
GCGCCAAGCACACTCAAACCAACAGGAGTAGCGGCAGCAAGCCACCGCAA
CATGTCCAGTACTTTGCAGGTGAA
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