mRNA_H-paniculata_contig2307.6196.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: D7FXG1_ECTSI (ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG1_ECTSI) HSP 1 Score: 898 bits (2320), Expect = 0.000e+0 Identity = 477/508 (93.90%), Postives = 482/508 (94.88%), Query Frame = 2
Query: 2 KRALVTTGVPLTA-RSSFHASAAVHAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISEDSTLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLAESA 1522
KRAL P+ A RSSFHASA AGSVGRVTQVIGAVVDVQFDKDLPPIFNALEV V +GASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGC DTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKA PIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKI+EDST GSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQ+IIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGT GVFVSL DTIKGFQEILSGAHDDLPEGAFYMVGDI SV KA+QLAESA
Sbjct: 10 KRALAA---PVAAGRSSFHASALAQAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCTDTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKA-------PIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKITEDSTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMVGDIASVGVKAKQLAESA 507
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A836CJ45_9STRA (ATP synthase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ45_9STRA) HSP 1 Score: 832 bits (2149), Expect = 1.510e-298 Identity = 438/500 (87.60%), Postives = 458/500 (91.60%), Query Frame = 2
Query: 23 GVPLTARSSFHASAAVHAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISEDSTLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLAESA 1522
G L+ R A A++ + + GR+TQVIGAVVDVQFDK LPPI NALEV+V +G RLVLEVAQHLGENTVRTIAMEATEGLTRGQ C DTG+PIMVPVG ETLGRIMNVIGEPVDERGPI SKAKA PIHN AP+F EQGK+QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGG+SVFAGVGERTREGNDLYHEMIEGGVIKI+E T GSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPR+IGDEHY+ ARATQKLLQDYK LQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGT GVFV L DTI GF+EILSGAHDDLPE AFYMVGDI SV+AKA++LAES+
Sbjct: 15 GHSLSGRVGVQACASM-SSNAGRITQVIGAVVDVQFDKKLPPIMNALEVDVAKGEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQKCLDTGSPIMVPVGAETLGRIMNVIGEPVDERGPIESKAKA-------PIHNVAPSFAEQGKTQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKINEKDTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGDEHYKVARATQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVKLEDTISGFKEILSGAHDDLPEAAFYMVGDITSVVAKAKKLAESS 506
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A7S2SJ94_9STRA (ATP synthase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ94_9STRA) HSP 1 Score: 799 bits (2063), Expect = 2.060e-285 Identity = 417/489 (85.28%), Postives = 440/489 (89.98%), Query Frame = 2
Query: 50 FHASAAVHAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISEDSTLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLAE 1516
FHA+A G G+VTQVIGAVVDVQFD +LPPI NALEV+V EG SRLVLEVAQHLGENTVRTIAM+ATEGL RGQ CADTGAPIM+PVG ETLGRI+NV+G+ VDE+GP+ SKA+A PIH SAP F EQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGG+SVFAGVGERTREGNDLYHEMIE GVIK++ DS GSKA LVYGQMNEPPGARARVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IA LGIYPAVDPLDSTSRMLDPRV+GD HYE ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGT G FVSL DTIKGF EIL+G HDD+PE AFYM GDI V+ A+ +A+
Sbjct: 30 FHAAAPA-LGGTGKVTQVIGAVVDVQFDGELPPILNALEVKVAEGESRLVLEVAQHLGENTVRTIAMDATEGLVRGQDCADTGAPIMIPVGPETLGRIVNVVGDAVDEKGPVISKARA-------PIHKSAPLFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIESGVIKVNGDSLAGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRNIASLGIYPAVDPLDSTSRMLDPRVLGDTHYEMARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGKFVSLEDTIKGFGEILAGEHDDIPEAAFYMKGDIAEVLESAKAMAQ 510
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A7S2EIC6_TRICV (ATP synthase subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIC6_TRICV) HSP 1 Score: 782 bits (2020), Expect = 4.860e-279 Identity = 408/474 (86.08%), Postives = 432/474 (91.14%), Query Frame = 2
Query: 86 GRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISED--STLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKA 1501
G+VTQVIGAVVDVQFD LP I NALEVEV EG+ RLVLEVAQHLGENTVRTIAME+T+GL RGQ CADTGAPI VPVG ETLGRI+NVIGEPVDE+GPI +K K + AP+H SAP+F EQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINN+A NHGG+SVFAGVGERTREGNDLYHEMIEGGVIKI+ + ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRML PRVIGDEHYE ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPF VAEVFTGT G FVSL TI+GF++I++G HDDLPEGAFYMVG+++ V KA
Sbjct: 26 GKVTQVIGAVVDVQFDGKLPKILNALEVEVPEGSERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCADTGAPIQVPVGPETLGRIINVIGEPVDEKGPIFAKGKETY----APLHRSAPSFSEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKINAETGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLTPRVIGDEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEQTIQGFKQIINGEHDDLPEGAFYMVGNVDEVKEKA 495
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A7R9UFC7_9STRA (ATP synthase subunit beta n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFC7_9STRA) HSP 1 Score: 780 bits (2014), Expect = 2.520e-277 Identity = 411/494 (83.20%), Postives = 442/494 (89.47%), Query Frame = 2
Query: 47 SFHASAAVHAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISE--DSTLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLAESA 1522
SFHAS A+ A +VG+VTQVIGAVVDVQFD +LPPI NALEV+V EG RLVLEVAQHLGENTVRTIAM++TEGL RGQ C DTG PIMVPVG LGRI+N+IGEPVDERGP+ + + APIH APTF EQGKS EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGG+SVFAGVGERTREGNDLY+EM+EGGVIKI + +ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPR++G+EHYE ARA QKLLQDYK LQDIIAILGMDELSEDDKLTVARARKV+RF+SQPF VAEVFTGTPG FV+L D+IK F+EILSGAHD+LPEGAFYMVG I+ V+ KA+ +A S+
Sbjct: 65 SFHASPAMCA-AVGKVTQVIGAVVDVQFDSELPPILNALEVKVAEGEPRLVLEVAQHLGENTVRTIAMDSTEGLVRGQPCEDTGNPIMVPVGPAALGRIINIIGEPVDERGPVPTD-------KFAPIHAPAPTFTEQGKSAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMMEGGVIKIDDANNSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDQEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRIVGEEHYELARAIQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVERFLSQPFHVAEVFTGTPGKFVALDDSIKAFKEILSGAHDELPEGAFYMVGGIDDVIQKAKDMAASS 550
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A1Z5JNL5_FISSO (ATP synthase subunit beta n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JNL5_FISSO) HSP 1 Score: 776 bits (2005), Expect = 9.250e-277 Identity = 409/478 (85.56%), Postives = 431/478 (90.17%), Query Frame = 2
Query: 86 GRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISED--STLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLA 1513
G+VTQVIGAVVDVQFD LP I NALEVEV +G+ RLVLEVAQHLGENTVRTIAME+T+GL RGQ C DTGAPI VPVG +TLGRI+NVIGEPVDE+GPI K KAS + AP+H SAPTF EQG++Q+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGG+SVFAGVGERTREGNDLY+EMIEGGVIKI E ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG HY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPF VAEVFTGT G FVSL DTI GF EI+SGA+D LPEGAFYMVG+I V AKA +A
Sbjct: 25 GKVTQVIGAVVDVQFDDKLPKILNALEVEVPKGSERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPI-FKDKAS--EKFAPLHRSAPTFNEQGRTQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTINGFSEIISGAYDSLPEGAFYMVGNIEDVKAKASTMA 499
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A7S2GC43_9STRA (ATP synthase subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC43_9STRA) HSP 1 Score: 769 bits (1987), Expect = 6.750e-274 Identity = 406/491 (82.69%), Postives = 436/491 (88.80%), Query Frame = 2
Query: 47 SFHASAAVHAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISEDST---LGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQL 1510
SFHA A + A S G+VTQVIGAVVDVQFD LP I NA+EV+V EG RLVLEVAQHLGENTVR IAM+ATEGL RGQ DTG PIMVPVG E+LGRI+NV+G+P+DERGP+ +K K P+H +AP F EQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGG+SVFAGVGERTREGNDLYHEMIE GVIK+ E + GSKA LV+GQMNEPPGARARVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IA+LGIYPAVDPLDSTSRMLDP+VIG EHY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPFTVAEVFTGT G FVSLAD+IKGF EI+SGAHDD+PEGAFYM G+I SV+ A+ +
Sbjct: 27 SFHA-APLSAAS-GKVTQVIGAVVDVQFDGALPRILNAMEVKVAEGQPRLVLEVAQHLGENTVRAIAMDATEGLVRGQEVEDTGDPIMVPVGPESLGRIVNVVGDPIDERGPVKTKVKL-------PLHRAAPLFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIESGVIKVDEGAENVFAGSKAALVFGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRNIAQLGIYPAVDPLDSTSRMLDPKVIGSEHYDLARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFTVAEVFTGTKGEFVSLADSIKGFSEIISGAHDDVPEGAFYMKGNIESVLEAAKNM 508
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A7S3PZB6_9STRA (ATP synthase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB6_9STRA) HSP 1 Score: 767 bits (1981), Expect = 5.310e-273 Identity = 402/480 (83.75%), Postives = 428/480 (89.17%), Query Frame = 2
Query: 80 SVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISED--STLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLA 1513
S G+VTQVIGAVVDVQFD+ LP I NALEVEV EG RLVLEVAQHLGENTVRTIAME+T+GL RGQ C D+GAPI VPVG TLGRI+NVIGEPVDE+GPI + K + AP+H SAPTF EQGK+Q+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGG+SVFAGVGERTREGNDLYHEMIEGGVIKI E S GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG EHY+ AR+TQKLLQDYKGLQDIIAILGMDELSEDDK+ V+RARKVQ+FMSQPF VAEVFTGT G FVSLA+TI GF++I+ G +DDLPEGAFYMVG+I V KA +A
Sbjct: 30 SAGKVTQVIGAVVDVQFDEKLPKILNALEVEVAEGNERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDSGAPIQVPVGPLTLGRIINVIGEPVDEKGPIFVEKKDE---KWAPLHRSAPTFSEQGKTQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKIDEKTGSCEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTEKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLDPRVIGQEHYDVARSTQKLLQDYKGLQDIIAILGMDELSEDDKIIVSRARKVQKFMSQPFHVAEVFTGTAGKFVSLAETISGFKDIIEGGYDDLPEGAFYMVGNIEEVKLKASSMA 506
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: B7FS46_PHATC (ATP synthase subunit beta n=7 Tax=Sar TaxID=2698737 RepID=B7FS46_PHATC) HSP 1 Score: 767 bits (1980), Expect = 6.030e-273 Identity = 402/478 (84.10%), Postives = 427/478 (89.33%), Query Frame = 2
Query: 86 GRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISED--STLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQLA 1513
G+VTQVIGAVVDVQFD+ LP I NALEVEV GA RLVLEVAQHLGENTVRTIAME+T+GL RGQ C DTGAPI VPVG +TLGRI+NVIGEPVDE+GPI +A + AP+H +APTF EQG+SQ+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGG+SVFAGVGERTREGNDLY+EMIEGGVIKI E ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG HY+ AR+TQKLLQDYK LQDIIAILGMDELSEDDKLTV+RARKVQ+FMSQPF VAEVFTGT G FVSL TI GF +I++G +DDLPEGAFYMVGDI V KA Q+A
Sbjct: 26 GKVTQVIGAVVDVQFDEKLPKILNALEVEVVAGAERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPIFLSKEAE---KYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQDYKSLQDIIAILGMDELSEDDKLTVSRARKVQKFMSQPFHVAEVFTGTAGKFVSLEKTIDGFSQIINGDYDDLPEGAFYMVGDIEDVKEKAGQMA 500
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Match: A0A1E7FRE4_9STRA (ATP synthase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7FRE4_9STRA) HSP 1 Score: 759 bits (1961), Expect = 4.810e-270 Identity = 402/479 (83.92%), Postives = 425/479 (88.73%), Query Frame = 2
Query: 80 SVGRVTQVIGAVVDVQFDKDLPPIFNALEVEVEEGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKASICHEAAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKISE--DSTLGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTPGVFVSLADTIKGFQEILSGAHDDLPEGAFYMVGDINSVMAKAQQL 1510
+ G+VT VIGAVVDVQF LP I NALEVEV EG RLVLEVAQHLGENTVRTIAME+T+GL RGQ C D+GAPI VPVG TLGRI+NVIGEPVDE+GPI K + + AP+H SAPTF EQG+SQ+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGG+SVFAGVGERTREGNDLYHEMIEGGVIKI E ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG+EHYE ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTV+RARKV +FMSQPF VAEVFTGT G FVSL D+IKGF+EI+SG +D LPE AFYMVG I+ V KA +
Sbjct: 25 NTGKVTTVIGAVVDVQFPDKLPKILNALEVEVAEGNERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDSGAPIQVPVGPLTLGRIINVIGEPVDEKGPIFPDKKIA---KYAPLHRSAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKIDEASGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGNEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVSRARKVMKFMSQPFHVAEVFTGTAGKFVSLEDSIKGFKEIISGDYDHLPELAFYMVGGIDDVKEKAANM 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2307.6196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2307.6196.1 >prot_H-paniculata_contig2307.6196.1 ID=prot_H-paniculata_contig2307.6196.1|Name=mRNA_H-paniculata_contig2307.6196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=426bp MEATEGLTRGQGCADTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAback to top mRNA from alignment at H-paniculata_contig2307:7281..16625- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2307.6196.1 ID=mRNA_H-paniculata_contig2307.6196.1|Name=mRNA_H-paniculata_contig2307.6196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9345bp|location=Sequence derived from alignment at H-paniculata_contig2307:7281..16625- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2307:7281..16625- >mRNA_H-paniculata_contig2307.6196.1 ID=mRNA_H-paniculata_contig2307.6196.1|Name=mRNA_H-paniculata_contig2307.6196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at H-paniculata_contig2307:7281..16625- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |