mRNA_H-paniculata_contig2306.6193.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: D8LGZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGZ6_ECTSI) HSP 1 Score: 309 bits (791), Expect = 3.320e-101 Identity = 181/329 (55.02%), Postives = 220/329 (66.87%), Query Frame = 1
Query: 1 SFFSGKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLAFDMGELASLE-EQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQ-----------APQLGGT----------------------------------------KDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALKSGE 831
++ GKV+WITGASSGLGEQLAI+AA GG+ G+ILSGRR+DALERV+ A + +E R+L FD+ +L E E AA+A+ FGRV+ L LNAG+STR SV ET LEV + VM VNYFG V LAKGLL A A G T + + FV+VNSVQGKFG+A RSSYAASKHAL+GFFD LRAE A GV + + PGY+RT LS+NALT DG++HAQMD +TA GRDPREVA+ +W+AV+E +DEVVIADLK KVAVLLRALAP++LFR+MAKRALK+ E
Sbjct: 37 AYLPGKVIWITGASSGLGEQLAISAAAGGAEGLILSGRREDALERVKGACEATAKDREVRVRLLPFDVADLEFAEKEAAARALGMFGRVDALVLNAGISTRGSVAETPLEVDRRVMAVNYFGPVGLAKGLLEATRDLPPPETRKTATSTGATAVLATPTTPPEATAADTFAKGSXXXXXXXXXXXXXXXXXSEGVRFVVVNSVQGKFGMANRSSYAASKHALVGFFDSLRAEQARRGVGVLNIFPGYVRTSLSVNALTADGTKHAQMDATTAQGRDPREVADEIWQAVSEDQDEVVIADLKTKVAVLLRALAPRVLFRIMAKRALKAKE 365
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A835ZHH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHH6_9STRA) HSP 1 Score: 239 bits (611), Expect = 4.370e-75 Identity = 140/271 (51.66%), Postives = 184/271 (67.90%), Query Frame = 1
Query: 16 KVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLA--FDMGELASLEEQAAKAVSEF--GRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRA 816
+VVW+TGASSGLGEQLAI AA G +I+SGR +DAL RV A + +RVL FD+ + A E+AAK V E G V++L AGVS RA+V+ TS+EV + +M+ N++ AV L K +L Q G+ + +NSVQGK G+A+R+ Y+ASKHAL G+ D LRAE A GVR+ + PGY+RT L +NAL GDGSRHA+MD STA G DP +VA ++WR AEGR E+V+A L V+VA +LRALAP ++FR A+RA
Sbjct: 16 RVVWVTGASSGLGEQLAIQAAAGAPKLLIISGRNEDALRRVAEACAAAASPAATDSRVLVVPFDVSD-AGARERAAKEVLEAAGGAVDVLVNCAGVSVRAAVESTSMEVDRMLMETNFYSAVDLTKAVLPGMVNQKSGS----IIAINSVQGKLGLAYRAGYSASKHALSGYCDALRAEVAPHGVRVLSACPGYVRTALCLNALRGDGSRHARMDASTAAGADPADVAASIWRGDAEGRGELVLAPLYVRVACVLRALAPWVVFRAAARRA 281
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: L8GSK3_ACACA (Dehydrogenase/reductase SDR family protein 7like, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSK3_ACACA) HSP 1 Score: 211 bits (538), Expect = 3.620e-64 Identity = 131/270 (48.52%), Postives = 168/270 (62.22%), Query Frame = 1
Query: 7 FSGKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRA 816
F GKVVWITGASSGLGE LA+ G A +ILS RR+D LER T G VL D+ ELASLE + A + GR+++L NAGVS LEV + VM++NYFG +AL K L+ A Q G H V+++SVQGK GI FRS+YAASKHAL GFFD R E G+ +T V PGYI+T LS+NALTG G+ + +MD++TA G +P VA V +AV+E RDE+++A V L+ L P +L ++ KRA
Sbjct: 31 FKGKVVWITGASSGLGEALALELQAAG-ARLILSARREDQLER-----TPAGEEPS----VLPLDVAELASLEGKVKDATAIHGRIDVLINNAGVS---------LEVDQRVMNINYFGTIALTKALVPAMTKQTTGG---HIVVISSVQGKLGIPFRSAYAASKHALHGFFDSARFELEKQGIAVTLVCPGYIKTDLSLNALTGSGTSYGKMDETTAKGYEPAYVAQRVMQAVSEKRDEIMVAKPDATAGVFLKVLCPSLLKTILRKRA 278
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A0A9WVM2_LYGHE (Dehydrogenase/reductase SDR family protein 7-like n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WVM2_LYGHE) HSP 1 Score: 213 bits (542), Expect = 4.830e-64 Identity = 126/271 (46.49%), Postives = 173/271 (63.84%), Query Frame = 1
Query: 13 GKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEG-ITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALK 822
GKVV ITGASSGLGE LA G +IL+ RR LERVR + ++ + + +L D+G++ S+EE+AA A + FG V++L N G+S R + +T++ V +MDVNY G VAL KGLL + G H V V+SVQG+ I +RS+YAASKHAL F D LRAE AH GV +T V PGYI+T LS+NA+T G+++ MD +T G +P +VA + RAV G E+ +A K+A++LRA+AP + F +M +RALK
Sbjct: 47 GKVVLITGASSGLGEALAHAFYACGCK-LILAARRSKELERVRDELVNLKDVRNNSVPAILTLDLGDVDSMEEKAATAQAIFGCVDVLVNNGGISYRGKITDTTMSVHSKIMDVNYLGQVALTKGLLGRMIERKSG----HIVTVSSVQGRISIPYRSAYAASKHALQAFMDSLRAEVAHEGVDVTVVSPGYIKTNLSLNAVTSVGNKYGVMDDATENGLEPSDVAGQIVRAVRYGEPELTVAPTMPKLAIILRAVAPALYFIIMRRRALK 312
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A087T299_STEMI (Dehydrogenase/reductase SDR family protein 7-like protein (Fragment) n=4 Tax=Stegodyphus TaxID=175340 RepID=A0A087T299_STEMI) HSP 1 Score: 212 bits (540), Expect = 1.080e-63 Identity = 126/268 (47.01%), Postives = 179/268 (66.79%), Query Frame = 1
Query: 16 KVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVI-VNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRA 816
KVV ITGASSG+GE LA + G A VIL+ RR++ALE+V+ + S+ +K T VL D+ L + +A +A++ +G ++IL N G+S+R + +T+LEV VM NYFG VAL K +L + +D F+I ++SVQGK I FRSSYAASKHA FFD L++E +H VR+ V PGY++T LS+NA+TGDGSR+ +MD++TATG DP+EVA +V A A + E+++A + K+A+LLR L P + F +M RA
Sbjct: 70 KVVLITGASSGIGEALAHAFYKAG-AKVILAARRREALEKVKEDLMSMYPSKHEPT-VLTLDLHNLKEIPAKAQEALNVYGYIDILINNGGISSRGEITDTALEVDLRVMVTNYFGPVALTKAILPSMLE-----RDSGFIIAMSSVQGKIAIPFRSSYAASKHATQAFFDTLKSELSHTNVRVCVVSPGYVQTNLSLNAVTGDGSRYGEMDQTTATGMDPKEVAESVVIATASKQTELILAGILPKIAILLRVLCPWLYFYIMGSRA 330
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A667XZN0_9TELE (Dehydrogenase/reductase 7B n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XZN0_9TELE) HSP 1 Score: 211 bits (536), Expect = 1.710e-63 Identity = 122/270 (45.19%), Postives = 174/270 (64.44%), Query Frame = 1
Query: 19 VVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERV--RLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALK 822
VV ITGASSGLG++ A G A ++L GR L+ V L TS T+ I ++ FD+ E ++ + A + + +G+V++L NAG+S R ++ +T + V ++VM+ NYFG +AL + LL + + G H V+++SVQGK I +RS+YAASKHA +FDCLRAE H G+ +T + PGYIRT LS+NA+TGDGS++ +DK+TATGRDPR+VA AV AV +VV+A +A+ LR L P + FRLM+ RA K
Sbjct: 39 VVVITGASSGLGKECARVFHRAG-ARLVLCGRDATRLQEVVQELTATSDTQTQTHIPSIVTFDLAETETVGKAAEEILKCYGQVDVLINNAGISYRGNILDTHVSVHRNVMETNYFGPIALTQALLPSMVHRRSG----HIVVISSVQGKMAIPYRSAYAASKHATQAYFDCLRAEVDHYGIPVTVISPGYIRTNLSLNAVTGDGSKYGVLDKTTATGRDPRDVAQAVLHAVRHKSKDVVLAGPLPTLAIYLRTLWPALFFRLMSSRARK 303
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A401P080_SCYTO (Uncharacterized protein n=5 Tax=Scyliorhinus TaxID=7829 RepID=A0A401P080_SCYTO) HSP 1 Score: 211 bits (537), Expect = 1.720e-63 Identity = 122/270 (45.19%), Postives = 171/270 (63.33%), Query Frame = 1
Query: 13 GKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALK 822
G VV ITGASSGLG++ A G A ++L GR + LE + +T K + V+ FD+ +L ++ + + FG+V++L NAG+S R ++ +T++ V K VM+ NYFG VAL K +L + + G H V+++SVQGK I FRS+YAASKHA FFDCLRAE G+++T + PGYIRT LS+NA+TG+GS++ MDKSTA G +PR VA AV AV + +V++A L VAV +R L P + F +MA RA K
Sbjct: 51 GAVVVITGASSGLGKECARVFHAAG-ARLVLCGRNKQKLEELTKELTVNDKKKAHMPHVVIFDLADLDTVRSSTQEILDCFGQVDVLINNAGISYRGNILDTAISVDKDVMNTNYFGPVALTKAILPSMVQRRSG----HVVVISSVQGKIAIPFRSAYAASKHATQAFFDCLRAEVEQDGIKVTVISPGYIRTNLSLNAVTGNGSKYGVMDKSTAEGYEPRAVAEAVLNAVCRRKKDVLVAGLLPTVAVYMRTLIPSLFFPVMAARAKK 315
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A8C4SQS6_ERPCA (Dehydrogenase/reductase 7B n=3 Tax=Polypteridae TaxID=8289 RepID=A0A8C4SQS6_ERPCA) HSP 1 Score: 211 bits (536), Expect = 2.430e-63 Identity = 125/275 (45.45%), Postives = 172/275 (62.55%), Query Frame = 1
Query: 1 SFFSGKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVR-LAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALK 822
++ VV ITGASSGLG + A G+ V+ R+ LE R L + G K ++ FD+ ++ + A + + +G V+IL NAG+S R ++ ETS++V + VM+VNYFG VAL K LL A + G H V+V+SVQG+ I FRS+YAASKHA FFDCLRAE A G+ ++ + PGYIRT LS+NA+TGDGS++ +DK+TA GRDP EVA AV AV + ++++A L +AV LR LAP + F +MA RA K
Sbjct: 45 TYIQDAVVVITGASSGLGRECAKVFHAAGARLVLCGRDRERLLELARELKGMADGRKKVHAPSIVTFDLSDMEMVASGAEEILKCYGHVDILLNNAGISYRGAILETSVQVDQEVMNVNYFGPVALTKALLPAMVQRKSG----HIVVVSSVQGRIAIPFRSAYAASKHATQAFFDCLRAEVAQFGLEVSVISPGYIRTNLSLNAVTGDGSKYGVVDKNTAEGRDPTEVAKAVLTAVGRRKKDLLLAGLLPVLAVYLRTLAPNVFFMMMASRARK 315
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A7J8BJU3_MOLMO (Dehydrogenase/reductase 7B n=2 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8BJU3_MOLMO) HSP 1 Score: 210 bits (534), Expect = 5.290e-63 Identity = 124/276 (44.93%), Postives = 172/276 (62.32%), Query Frame = 1
Query: 1 SFFSGKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERV--RLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLGVRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAKRALK 822
++ VV ITGA+SGLG + A G A ++L GR ++ALE + LA + + + FD+ + ++ AA+ + FGRV++L NAGVS R ++ +T+L+V + VM NYFG VAL K LL P + + H V ++SVQGK + FRS+YAASKHA FFDCLRAE V++T + PGYI T LS+NA+T DGSR+ MDK+TA GR P EVA V AV + +++V++A L +A+ LR LAP + FRLMA RA K
Sbjct: 48 AYVQDAVVVITGATSGLGRECAKVFYAAG-AKLVLCGRNREALEELTKELAASQATKVQTHTPHTVTFDLADTGTVVAAAAEILQRFGRVDVLINNAGVSYRGAILDTALDVDQRVMQTNYFGPVALTKALL----PSMTARRRGHVVAISSVQGKISVPFRSAYAASKHATQAFFDCLRAEMEQYAVKVTVISPGYIHTNLSINAVTADGSRYGVMDKTTAQGRMPVEVARDVLAAVGKKKEDVILAGLLPSLAIYLRTLAPGLFFRLMASRARK 318
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Match: A0A450XPW6_9GAMM (Short-chain dehydrogenase n=3 Tax=unclassified Candidatus Kentron TaxID=2643149 RepID=A0A450XPW6_9GAMM) HSP 1 Score: 208 bits (529), Expect = 8.200e-63 Identity = 124/269 (46.10%), Postives = 170/269 (63.20%), Query Frame = 1
Query: 13 GKVVWITGASSGLGEQLAIT-AAEGGSAGVILSGRRQDALERVRLAVTSVGGTKEGITRVLAFDMGELASLEEQAAKAVSEFGRVNILALNAGVSTRASVQETSLEVAKHVMDVNYFGAVALAKGLLAAQAPQLGGTKDIHFVIVNSVQGKFGIAFRSSYAASKHALIGFFDCLRAETAHLG--VRITTVLPGYIRTGLSMNALTGDGSRHAQMDKSTATGRDPREVANAVWRAVAEGRDEVVIADLKVKVAVLLRALAPQMLFRLMAK 810
GK+VW+TGASSG+GE LA+ AAEG A +ILS RR+D L + R G R+L D+ +LASL +A A + FG V+IL N G+ RA+ ET+L + K +MDVNYFG +AL K +L Q GG V+ +SV GKFG+ RS+YAASKHAL GFFD LR E A G +RIT + PG+++T LS+ AL GDG+RH +MD G P E A + +A+A+G+DEVVI ++ + V ++ L P +L +++ K
Sbjct: 20 GKIVWVTGASSGIGEALALRMAAEG--ARLILSARREDGLRKARKRCEEEGAQ----ARILPLDLADLASLPAKADAAWALFGGVHILVNNGGIGQRATAMETNLHIDKTIMDVNYFGTIALTKAILPKMIGQGGG----QIVVTSSVLGKFGVQTRSAYAASKHALHGFFDALRCEMAIAGHPIRITLICPGWVQTNLSLEALKGDGTRHGRMDAGQGKGMSPEEFAGKMCKAIAKGKDEVVIGGIEAR-GVSVKRLFPSLLNKILPK 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2306.6193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2306.6193.1 >prot_H-paniculata_contig2306.6193.1 ID=prot_H-paniculata_contig2306.6193.1|Name=mRNA_H-paniculata_contig2306.6193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp SFFSGKVVWITGASSGLGEQLAITAAEGGSAGVILSGRRQDALERVRLAVback to top mRNA from alignment at H-paniculata_contig2306:14292..16514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2306.6193.1 ID=mRNA_H-paniculata_contig2306.6193.1|Name=mRNA_H-paniculata_contig2306.6193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2223bp|location=Sequence derived from alignment at H-paniculata_contig2306:14292..16514- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2306:14292..16514- >mRNA_H-paniculata_contig2306.6193.1 ID=mRNA_H-paniculata_contig2306.6193.1|Name=mRNA_H-paniculata_contig2306.6193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig2306:14292..16514- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |