mRNA_H-paniculata_contig2294.6139.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2294.6139.1
Unique NamemRNA_H-paniculata_contig2294.6139.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: D8LHC7_ECTSI (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC7_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 6.010e-130
Identity = 169/214 (78.97%), Postives = 190/214 (88.79%), Query Frame = 3 
Query:   78 LFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGG-GGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLKGG 716
            +FYFPGLSS PWHDP+ F WCQE+E NVPAI AEYE LVH++K ASDYD+GG GGEHKLHSG+WDWHSYVLKG RQ+ FRQHCPLT+SLLD VA+HMV TPFSFSFFSTLHGG SIA HTAPCNLR+R HLPL VPS +PS+CGMRVG E RPW +GKC+VFDD YEHEVWNKT++ERVLLLFDLWHP+L  EER AVTDMFG+AA+QGWL+GG
Sbjct:    1 MFYFPGLSSWPWHDPASFPWCQEMEKNVPAIRAEYENLVHKKKAASDYDTGGDGGEHKLHSGQWDWHSYVLKGRRQEVFRQHCPLTASLLDSVADHMVGTPFSFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSADPSQCGMRVGGEIRPWEEGKCLVFDDCYEHEVWNKTERERVLLLFDLWHPDLAGEERNAVTDMFGYAARQGWLRGG 214
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A836CPE8_9STRA (Putative aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE8_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.240e-100
Identity = 145/237 (61.18%), Postives = 176/237 (74.26%), Query Frame = 3 
Query:   12 TATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFA----WCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLK 710
            TATLVKSAICRT T+  RP+PTLF+FPGLSS  WH+P K      W + LE++  A+  EY +LV +RK ASDYD G   EHKLH G WDWHSYVLKG +Q +F + CP+T+ LLD   +HM  TP S+SFFSTLH   +IAPHTA CNLR+R H PLIVPS    ECG+RVG E R W +GK M+FDD+YEHEVWN T  +RV+LLFD+WHPEL  +ER A+ DMFG+A +QGW+K
Sbjct:    9 TATLVKSAICRT-TAKCRPHPTLFFFPGLSSKTWHEPHKDTTHDTWVRRLESSYDAVKREYLDLVEKRKAASDYDVGT--EHKLHKGHWDWHSYVLKGQKQPSFAEACPITAQLLDATESHMTGTPMSYSFFSTLHPRSAIAPHTAACNLRLRCHFPLIVPSTNADECGIRVGDEVRAWEEGKAMLFDDAYEHEVWNHTGSQRVVLLFDIWHPELVPDERTAIMDMFGYARQQGWMK 242
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A7S3MFY7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY7_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.030e-82
Identity = 134/236 (56.78%), Postives = 164/236 (69.49%), Query Frame = 3 
Query:    9 ATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLD--DVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLK 710
            A AT+++SA+CRTR    RP P+LF+FPGLS+ P  DPS F+W +ELE+    I  EY+ L  +  T SDY  G   EHKLH GKWDW+SY+LKG RQ  F  HCP T   L+  D    M  TPFSF+FFSTLH   +IAPH  PCNLRIR H PLIVP     +CGM+VG +T  W +GK ++FDD YEH+VWN+TD+ERVLLLFDLWHPEL  +E  A+ DMF  A ++GWLK
Sbjct:    8 ALATILQSAVCRTRVK-HRPAPSLFFFPGLSTQPVFDPSLFSWTKELESKRDVILEEYKALRAKHPT-SDY--GSKEEHKLHEGKWDWNSYILKGKRQTDFAIHCPKTVEFLESLDSPTLMRGTPFSFAFFSTLHPHSTIAPHYGPCNLRIRCHFPLIVPKS--GKCGMQVGDKTVTWEEGKPVLFDDCYEHKVWNETDEERVLLLFDLWHPELHPDEIFAIEDMFDEAKQKGWLK 237
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A024TW67_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW67_9STRA)

HSP 1 Score: 251 bits (640), Expect = 8.650e-79
Identity = 123/236 (52.12%), Postives = 163/236 (69.07%), Query Frame = 3 
Query:    9 ATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHR--QDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDK-ERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWL 707
            A A L++SA+C T T+  RP+PTLF FPGL+S P+H+P  F W + LE NV  I +EY  L   +KT SDYD   G EH LH+G+WDW SY+ KG++   DAF +HCP T+SLL+ +   M   PF+++FFS+L  G SI  H+APCN+R+R H PL VP      CG+RVG + R W++G+C++ DDSY+HEVW+   K ERV+LLFD WHP+L  EER A+ DMF  A  +GWL
Sbjct:    5 AKAALLRSALCLT-TAKPRPSPTLFMFPGLTSAPFHNPRDFDWTRALEANVDVIRSEYLALKANQKT-SDYDVQSGHEHALHNGQWDWFSYMTKGNKTGNDAFEEHCPTTTSLLNSIPGFMTSIPFAYTFFSSLQPGSSIKAHSAPCNIRLRCHFPLFVPPG----CGIRVGDQIRTWKEGECLILDDSYDHEVWHDGKKGERVVLLFDFWHPDLVPEERDALIDMFAEAKTKGWL 234
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: W4FEV0_9STRA (Asp_Arg_Hydrox domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEV0_9STRA)

HSP 1 Score: 246 bits (629), Expect = 5.830e-77
Identity = 121/238 (50.84%), Postives = 162/238 (68.07%), Query Frame = 3 
Query:    3 TMATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQD--AFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNK-TDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWL 707
            T A A L++SA+C T T+  RP+PTLF FPGL+S P+H+P  F W + LE NV  I  EY  L   +KT SDYD  GG EH LH G+WDW SYV KG + +  +F +HCP T++LL  +   M   PF+++FFS+L  G SI  H+APCN+R+R H PL VP      CG+RV  +TR W++G+C++ DDSY+HEVW+   + ERV+LLFD+WHP+L  +ER A+ DMF  A  +GWL
Sbjct:   15 TRAKAALLRSALCLT-TAKPRPSPTLFMFPGLTSAPFHNPRDFDWTRALEANVDTIRTEYLALKAHQKT-SDYDVQGGQEHSLHQGQWDWFSYVTKGKKPNGASFEEHCPTTAALLTSIPGFMTSVPFAYAFFSSLQPGSSIKAHSAPCNIRLRCHFPLFVPPG----CGIRVADQTRSWKEGECLILDDSYDHEVWHDGKNGERVVLLFDVWHPDLIVDERQALIDMFADATNKGWL 246
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A485KAE6_9STRA (Aste57867_1342 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAE6_9STRA)

HSP 1 Score: 243 bits (620), Expect = 8.110e-76
Identity = 122/234 (52.14%), Postives = 158/234 (67.52%), Query Frame = 3 
Query:    9 ATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNK-TDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWL 707
            A A L++SA+C T T+  RP+PTLF FPGL S P+HD   F W +  E N+  I AEY  L  R+K+ SDY   G  EH LH G+WDW SYV KG R  AF   CP T++LL+ V   M   PF+++FFS+L    +I PH+APCN+R+R H PL VP +    CG+RV  ETR W++G+ M+FDDSY+HEVW+     ERV+LLFD+WHP+L  EER A+T MF  AA++GWL
Sbjct:    5 AKAALIRSALCLT-TAKPRPSPTLFVFPGLKSQPFHDAKDFPWTKAFEENLDTIRAEYLALKDRQKS-SDYVLTGQ-EHSLHQGQWDWFSYVTKGKRTSAFEAECPTTAALLNAVPGFMTSLPFAYAFFSSLQPKSAIKPHSAPCNIRLRCHFPLWVPKD----CGIRVADETREWKEGRAMIFDDSYDHEVWHDGATGERVVLLFDMWHPDLVPEEREALTQMFAEAAEKGWL 231
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A7S2WWP7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWP7_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.420e-73
Identity = 124/241 (51.45%), Postives = 158/241 (65.56%), Query Frame = 3 
Query:   21 LVKSAICRTRTSTFRPNPTLFYFPGLSSTP-WHDPSKFA---WCQELE--NNVPAITAEYEELVHRRKTASDYD----SGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANH--MVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWL 707
            L+ SA+CRTR    RP PTLFYFPGL+S   W   S      W + LE  +N+  +  EY+ L+     ASDY     +   GEHK+HSG W WHS V +G R    +  CP T++L+D+V     M  TPFSFSFFSTLH   SIAPH+APCNLR+R+H+PL VPSE+ +ECG RV     PW++G+ +VFDDSYEHEVWN+T   RVLLL D+WHP+L   E+ A+T MF  A ++GWL
Sbjct:   53 LLASAVCRTRAK-HRPAPTLFYFPGLTSRAVWSRDSALKALPWLETLEASDNIALMRREYDRLL-ELGVASDYSVKDTTRESGEHKMHSGDWSWHSLVTRGRRNPKAKDVCPGTAALIDEVVGPDLMTGTPFSFSFFSTLHSHSSIAPHSAPCNLRLRLHVPLTVPSEDANECGFRVADHVAPWKEGETLVFDDSYEHEVWNRTPVPRVLLLLDVWHPDLTLAEKIAITSMFQEAEEKGWL 291
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A1W0A340_9STRA (Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A340_9STRA)

HSP 1 Score: 241 bits (614), Expect = 3.680e-73
Identity = 120/237 (50.63%), Postives = 157/237 (66.24%), Query Frame = 3 
Query:    3 TMATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDK-ERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLK 710
            T A A L++SA+C T T+  RP+PTLF FPGL S P+H    F W + L  N+  I  EY  L H +K  SDY   G  EH LH G+WDW SYV+KG +   F QHCP T+ LL+D+   M   PF+++FFSTL    +I  H+APCN+R+R H PL VP      CG+RV  +T+ W++G+CMVFDD+Y+HEVW+   K ERVLLLFD WHP+L +EE+ A+ DMF  A  +GWL+
Sbjct:  134 TKAKAALLRSALCLT-TAKPRPSPTLFVFPGLKSQPFHANQDFPWTKLLSENLDIIREEYVALRHAQKE-SDYVVAGQ-EHTLHQGQWDWFSYVIKGKKTSLFEQHCPTTTKLLNDIPGFMTGLPFAYAFFSTLKPQSAIKAHSAPCNIRLRCHFPLFVPKG----CGIRVADQTKEWKEGECMVFDDAYDHEVWHDGAKGERVLLLFDFWHPDLIEEEKAALIDMFAQATDKGWLQ 363
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BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A067C8Q3_SAPPC (Asp_Arg_Hydrox domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8Q3_SAPPC)

HSP 1 Score: 236 bits (601), Expect = 5.180e-73
Identity = 117/235 (49.79%), Postives = 154/235 (65.53%), Query Frame = 3 
Query:    6 MATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDK-ERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWL 707
            MA A L++SA+C T T+  RP+PTLF FPGL + P+H+   F W Q   +N+  I  EY  L H +K  SDY   G  EH LH G+WDW SYV KG + D F  HCP T+ LL+ +   M   PF+++FFSTL    +I  H+APCN+R+R H PL VP      CG+RV  ET+ W++G+CMVFDD+Y+HEVW+   K ERV+LLFDLWHP+L   E+ A+ +MF  A  +GWL
Sbjct:    1 MAKAALLRSALCLT-TAKPRPSPTLFMFPGLKAQPFHEAKDFPWTQSFTDNLDTIREEYVALRHAQKE-SDYVLAGQ-EHALHQGQWDWFSYVTKGKKVDLFETHCPTTTRLLNAIPGFMTGLPFAYAFFSTLQPQSAIKAHSAPCNIRLRCHFPLFVPPN----CGIRVADETKEWKEGECMVFDDAYDHEVWHDGQKGERVVLLFDLWHPDLVPGEKDALINMFADATDKGWL 228
[Close]
BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Match: A0A8K1C3S3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3S3_PYTOL)

HSP 1 Score: 233 bits (594), Expect = 8.650e-72
Identity = 120/239 (50.21%), Postives = 153/239 (64.02%), Query Frame = 3 
Query:   15 ATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELENNVPAITAEYEELVHRRKTAS------DYDSGGGGEHKLHSGKWDWHSYVLKGHRQDAFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRIRVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNK-TDKERVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLK 710
            A L++SA+C T T+  RP+PTLF+FPGL S  WHDP  FAW Q LE N   I  E+  L   R  AS      DY+     EH+LH G+WDW SYV +G RQ  F   CP T  +L+ +   M + PF++SFFS L    +I  H+APCN+R+R H PL VP      CG+RVG ETR W +GK +VFDD+Y+HEVW+     ERVLLLFD+WHP+L +EER  + DMF  A ++GWLK
Sbjct:    7 AALLRSALCLT-TAKPRPSPTLFFFPGLKSQAWHDPKDFAWVQRLEANHAVIRDEFLALREARLKASAGTSVSDYNVNDK-EHQLHQGEWDWLSYVTQGRRQADFAVACPKTVEILESIPGFMTNLPFAYSFFSVLKPKSTIKAHSAPCNVRLRCHFPLFVPEG----CGIRVGDETRHWEEGKALVFDDAYDHEVWHDGASGERVLLLFDVWHPDLIREERECLVDMFDSAREKGWLK 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2294.6139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHC7_ECTSI6.010e-13078.97Asp_Arg_Hydrox domain-containing protein n=2 Tax=E... [more]
A0A836CPE8_9STRA1.240e-10061.18Putative aspartyl/Asparaginyl beta-hydroxylase n=1... [more]
A0A7S3MFY7_9STRA1.030e-8256.78Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A024TW67_9STRA8.650e-7952.12Asp_Arg_Hydrox domain-containing protein n=1 Tax=A... [more]
W4FEV0_9STRA5.830e-7750.84Asp_Arg_Hydrox domain-containing protein n=3 Tax=A... [more]
A0A485KAE6_9STRA8.110e-7652.14Aste57867_1342 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S2WWP7_9STRA3.420e-7351.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A340_9STRA3.680e-7350.63Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Thra... [more]
A0A067C8Q3_SAPPC5.180e-7349.79Asp_Arg_Hydrox domain-containing protein n=3 Tax=S... [more]
A0A8K1C3S3_PYTOL8.650e-7250.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2294contigH-paniculata_contig2294:2692..8443 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score381.7
Seed ortholog evalue2.5e-103
Seed eggNOG ortholog2880.D8LHC7
Preferred nameASPHD2
KEGG koko:K00476
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.peptide-aspartate beta-dioxygenase activity
EggNOG OGsCOG3555@1,KOG3696@2759
EC1.14.11.16
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons7
Model size1126
Cds size714
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929641.435713-UTR-H-paniculata_contig2294:2691..26961622929641.435713-UTR-H-paniculata_contig2294:2691..2696Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2294 2692..2696 +
1691480947.6084619-UTR-H-paniculata_contig2294:2691..26961691480947.6084619-UTR-H-paniculata_contig2294:2691..2696Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2294 2692..2696 +
1622929641.5957627-UTR-H-paniculata_contig2294:8036..84431622929641.5957627-UTR-H-paniculata_contig2294:8036..8443Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2294 8037..8443 +
1691480947.682616-UTR-H-paniculata_contig2294:8036..84431691480947.682616-UTR-H-paniculata_contig2294:8036..8443Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2294 8037..8443 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929641.4532588-CDS-H-paniculata_contig2294:2696..27451622929641.4532588-CDS-H-paniculata_contig2294:2696..2745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 2697..2745 +
1691480947.6181197-CDS-H-paniculata_contig2294:2696..27451691480947.6181197-CDS-H-paniculata_contig2294:2696..2745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 2697..2745 +
1622929641.4868822-CDS-H-paniculata_contig2294:4613..47621622929641.4868822-CDS-H-paniculata_contig2294:4613..4762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 4614..4762 +
1691480947.625841-CDS-H-paniculata_contig2294:4613..47621691480947.625841-CDS-H-paniculata_contig2294:4613..4762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 4614..4762 +
1622929641.5133696-CDS-H-paniculata_contig2294:5176..53081622929641.5133696-CDS-H-paniculata_contig2294:5176..5308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 5177..5308 +
1691480947.6342602-CDS-H-paniculata_contig2294:5176..53081691480947.6342602-CDS-H-paniculata_contig2294:5176..5308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 5177..5308 +
1622929641.5309522-CDS-H-paniculata_contig2294:5758..57881622929641.5309522-CDS-H-paniculata_contig2294:5758..5788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 5759..5788 +
1691480947.6436884-CDS-H-paniculata_contig2294:5758..57881691480947.6436884-CDS-H-paniculata_contig2294:5758..5788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 5759..5788 +
1622929641.5459194-CDS-H-paniculata_contig2294:6363..65411622929641.5459194-CDS-H-paniculata_contig2294:6363..6541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 6364..6541 +
1691480947.6531475-CDS-H-paniculata_contig2294:6363..65411691480947.6531475-CDS-H-paniculata_contig2294:6363..6541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 6364..6541 +
1622929641.5621908-CDS-H-paniculata_contig2294:6980..70901622929641.5621908-CDS-H-paniculata_contig2294:6980..7090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 6981..7090 +
1691480947.6631567-CDS-H-paniculata_contig2294:6980..70901691480947.6631567-CDS-H-paniculata_contig2294:6980..7090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 6981..7090 +
1622929641.5745933-CDS-H-paniculata_contig2294:7970..80361622929641.5745933-CDS-H-paniculata_contig2294:7970..8036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 7971..8036 +
1691480947.6726265-CDS-H-paniculata_contig2294:7970..80361691480947.6726265-CDS-H-paniculata_contig2294:7970..8036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2294 7971..8036 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2294.6139.1prot_H-paniculata_contig2294.6139.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2294 2697..8036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2294.6139.1

>prot_H-paniculata_contig2294.6139.1 ID=prot_H-paniculata_contig2294.6139.1|Name=mRNA_H-paniculata_contig2294.6139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MATATLVKSAICRTRTSTFRPNPTLFYFPGLSSTPWHDPSKFAWCQELEN
NVPAITAEYEELVHRRKTASDYDSGGGGEHKLHSGKWDWHSYVLKGHRQD
AFRQHCPLTSSLLDDVANHMVDTPFSFSFFSTLHGGGSIAPHTAPCNLRI
RVHLPLIVPSEEPSECGMRVGAETRPWRKGKCMVFDDSYEHEVWNKTDKE
RVLLLFDLWHPELEQEERGAVTDMFGFAAKQGWLKGG*
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mRNA from alignment at H-paniculata_contig2294:2692..8443+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2294.6139.1 ID=mRNA_H-paniculata_contig2294.6139.1|Name=mRNA_H-paniculata_contig2294.6139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5752bp|location=Sequence derived from alignment at H-paniculata_contig2294:2692..8443+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACGATGGCTACTGCTACATTGGTGAAGAGCGCAATATGTCGAACGAGA
ACATGTGAGGGCTATGATATCAGAAGCCATATTCTTATCTTGGTGCTTTG
ATGATGGCAAGCATGCAGTAGCTCGCCGAACAGCCGTTTTACAACACCAA
CACATCAAGCAATCATCTTTGCGCTCAACTACCCAACCGAGCACGGTTAC
ACCGCAGTTTTGAATTAGGGCACATAAAAGCACGTGGTGAGCTATGCACC
TTATAATCATAATAGGTTTACCAAGAAAAGCAGCTCCAGTACGTGGTCTC
GCCAATACTGCACCTGGCATGTGGAGCATCGGATCAAATTTATGTGTCTA
CTCCGCTGGCCACACATTACAGACAGTACAGCTGCTGGTACTGTGTGTGA
CCTGTATCTGAAAGTTATGCGACACACTACTGCTGTGCTGTACTGTTGTA
GCGATTTTCAAAAGGTCCCCGTCCCCATGTATAGTGTACGGTACGTATGT
CGACCTACGGTGTTTGAAGCTGACTATTCTAAGAGATCAAAATGACACCA
TTGGGTTAACGTCTCATTAACCGGATTATCAGAATTGTCCGTTAATCTTC
AAACCCTGTCTATCCGGATTCGACAGAGCTTACTATTCATACACTAATCA
TTGGGAAGCATTGCACAACTCGGACGAAGGTCCTTCATCTGTCAATGAAG
GATGTCGCGGGTTTTGGGACTATACCAGCACGAGGATGCCTGGTGCCTTC
CGAAACCCACAAATCGATAGCATGGATATCCTGCACACCTTCAAGGAGTG
TTCGACTTTTGAGTATAAACGGATGACAGTTCCGTTGCGTGTCAATTACT
TGAAAATCAAACCTTTGTCCGAACTGTGAATCATTGCGCCCTCATCGTGC
CAACATCATGCGAAGATGGTTTTTTTTTTCAAGAGCCCCAGGAGACCAGG
GGAAAAACTTCTGCCAGTTCTCTACTGAAACAGCCATGTTTTCACCAATG
TTACCCGCCCAAATTATCCAGGTCTCCGCAGACCGGGGTCTTGGAGGACT
ACTCCCAGCTTCGGCGCTCATGTACCGCTATCAAGCAAACAAGCAGTGTA
GGACTTGGGTCAAGAATAGACCCGCACCGTACCCATTCGGGATTTGATTC
GTTCTTGATGACCATTTTCCTTTCCACCCCAAAACGTAAAGAATCACCTT
TACGACTCAGAAGCGTTGCGAGGGAAGGAGCTTAAGCCCACGACACGATA
AAAATTACCGTGTCCCGATTCCCGACCCCCGCAGAACGCGGGGAATACTG
TCGTGTCGGTCAGCCCTTCGGTTCTTTGCTTAAACCTAGGGCATATTGTG
GGATAGCCGTTGTACGTGACTTGGCCGTTTTGACATTCGGTTTTAGAATG
CACTTGAAAAGTACAGAATCCTCACACAGAACCCTTGATCACACTCCTGT
CATGGTCATCGGCAAAGGTTACCCTCTAGCCGTGCCCTACCCTTACGGGC
TTAGACTCGTCTTCTTGATGACCATTACGCAATTCCCTTCCTCCGCCAGC
CATGGCACCTCCTTTTTTGGTCATCATACATAAAACATGCTACATTTTTT
TACGTTTCCTATAAATGTGGGGTGCAACTTGTGCGTGGGAGAAATGACCC
GCACTTGCTGTAATCCGCAGTATAGACCATGTAAGCCATAGTTCCTGTAG
TCTGGGAACTGTGACCCACACTACGGGTAATATGGGTAATATGGGTAATA
GGGTCGGAATTGTGGCCAATACTGTGGCCAAGGAAAATTGGGTCAAGCGA
TGCTCGCTCGACCTCGATTGCGCCTTTGCACCTCGTGCCCGGCAGGGTTA
GAGCCACTAAGCTTACCCGACTGTCTCCAACTCACTGCTCGGTTCTGCGC
GTGTGTTATTTTCCATCTCTAGCGACATTTCGGCCGAACCCGACACTTTT
TTACTTCCCGGGGCTGTCTTCTACACCATGGCACGACCCTAGCAAGTTCG
CTTGGTGCCAAGAGTTGGAAAATAATGTCCCAGCCATCACCGCAGAGTAC
GAGGAACTCGTGCACCGAAGGGTACGTATTGATGGTCAGTAAAGATCCCC
GAACCGAATGTTATGCTGTACTATGAGCATGCGCGACGCTTAAATACTAC
ACTGTCTGATTCTTGATCCAACGGCTGGGTAGTCGATGTGTATCCGTTTA
CACGATGGTTTTTTGTATACATATCCTCTGTCTCTCAATACTTTGGATGT
GCCAGGCGCGGGGGTAGAGAGGCGACCACTTGCTGCTGTACTGGTCTATT
GATGTGCGACGGATGTCGTGCGGGTGAGGTTGCCATGATCGAATACGCAA
GGCATACCCGTAGCGACACTCCACTCCAGAGATACTCGTGGCTTTGGAAG
CACTCACAGCTACCAGGATATTTCGACCCACGTCGCTCGCCCTAACACAT
GCCTCTATCATAACCCCCATGTTCTTGCTTGACAGAAAACAGCATCAGAC
TATGACTCGGGCGGTGGTGGAGAGCATAAGCTTCATTCAGGAAAGTGGGA
CTGGCACAGTTATGTTCTCAAGGGACACCGACAGGACGCATTTCGTCAGC
ATTGCCCACTAACTTCGGTGAGACCATAGAGCGTATTCGTCTGTTGTGAT
GATTTTTTGAGAGTTCTTGAGCGAACTGGGTCAAGTTGAGCCATCACAGT
GGCTGGTCAAGAAAGTGCTGGGGCAGCAGTTGTTGGTACTTCGTGGGAGC
ATGCCGGCAATCTGTTGGGAGCGATAGTGTCAGCTTTGGTGACCTCAGTA
TATTGCTGAAGCTAGAATACTGTAGGTTTTATGTGAGGTGGAAGAAGTGG
CCTCCCACGTACGTCTCGTACTCGTGTAAAAGCTACTGCCGTTGTTCTTG
CTTGAAATCCCTGACCTCTAGGAACACTGAATATCCCGGCAGCTATTCTC
GCTTCGCTCCTCCCGAGCACACGCACTCGACAGCCTTTCTCAGAACTAAC
GACAACGGGCATTGCCCCTGCTATCCGCGCTCCCTGCCCCTGGTTGTTCT
TGTGGGCTACGTTCCAGTCTCTCCTTGACGATGTCGCGAATCACATGGTG
AGTGCCACGCCATAGAACTTTTTTCATTGATATCTCTTGCGTTCGCGGTA
CCCGGCGGTGTGCCGATGGGCTGTTTTCAATGATGTAGCTATCGATGCTC
AAGTCAAGTCATATTCACATCTCACACCAGCTGCGGTGTTTCGGCTAAGA
GGCGTGGGTGGATCTCCTCGGGTGGCTACTATAGCGGTCTGGGCGCGGAA
GGTATCTGATGGGAGCTTGACGACCCAGGTGTAGACCTTGCCGCGATCGG
GTTCACTGTAAGTTATATATCGTATTAACGGTGCCCCGCACTCCAAAATT
GTCTGAATGATACCGGGGGACTTTCTCTTGACCTGAGCGCGACAGAATAC
GCCACAATGAAAGCTATGCATGAATTTTCGGAGGGAAAGGTCGGCCTTAG
TAGACAAGCCACGAATGCGGGGTCAGTACTACAGAAATTTAACGAACAGC
CGTGCAGCTGATGGTGATATGACGCGGGGTGCGAATTGAGCGATATTGCA
CCATTTTTTGGCAGTGGCGTCCTCAGAAGAGCTTGATCTTGCTCCATTGA
ATACCCGGTTGAAACTGCGCAGGTTGATACCCCGTTCTCTTTTTCGTTTT
TCTCCACCCTCCACGGAGGAGGCTCCATTGCGCCACACACGGCTCCCTGC
AACCTTCGGATACGCGTCCACCTGCCGCTTATCGTTCCCTCTGAAGAACC
GTCGGAGTGTGGGATGAGAGTAGGCGCGGAAACCCGGCCATGGCGAAAAG
GTGTGTCGTTCAGAGTCATCTCTTTGCTTGCTGATAATGCCCTCAATTGC
CTCGTAGAGTGGGTAATCTCGCCCGTCTACATGCTAGAGCAGGGAGATGG
GACGTAAACAGGTGGTTTCTGTTCTCGACGTCTCGCATTCTGGATTCTAG
ACAACCTAACGAAGCTGCCCTTTGTAGTTGTCTGCGACCACAGCCACCAG
GTCCGGATGCTTCGCAACTACTGTGGTGAATTGTTGAACACTTGTATAGT
TGATCAGACAAATATTGATAAGGCGAGGTAAATAATGTACTACGAGTCGA
GGGATTGCTTAATGATCGCTTGGTTCTGTCCATGCGCTGTGGTTTACGCG
AGGGAGCTTCGAGTGATTTTGGTGTTCACATCGGTGTGAAACGTGCATCG
ATCGATTTTAGCCATGCCAACAAACTCCGGCCTCCGCAGGAAAGTGCATG
GTATTCGATGACTCTTATGAGCACGAGGTGTGGAACAAGACTGATAAGGA
GCGTGTTCTTCTTCTGTTCGACCTGTGGCACCCGGAATTAGAGCAGGAGG
TGAGTGAGCAGACCCACAACGGATGGAGATGGCGGTGGTCCGAATGTACT
TGGAGTTACGAAACCCCCCAACTCGGATTGACCTCTGTTTTATTCTATTT
CTGGGTTGGGCTGCCTACATGACTTCGTACGAAGCATGTGCTAATGGTGG
TTCTGGTGAACGACATGCGATACATGTTTGCGGCCGCGATTTAACCAATC
ATGTGAGCGTGCCCATTTTTTTTCACTTCAAGTTAATCCCCCCCCCCTGT
TTTCTAGGCAACTTGACGTGTTTTTTCTATGTATTGACCGTACTGTAGTC
CCTCTTCTGACGAGGTCGTCTTTGTGGATCCCTCAGACCCGCGGTCAGTT
GCCGCCGAAATGGATAGTAATACATTGAAAGGAACGCATTACAGGGCTCA
TGTCAAAAATGAACAGTGATGGTAAGCCCAGCTGGGGGATCGTTGTGAGC
AATCGTTTCCAAAATCGGTTCATGATTTCAACTTACCTTGTTGAGGCGAG
TTGCTACTCCCCATGTTCCTTCTACTAGGGGATGCTGGTAAAAAACACCC
TCCCCTCATGTTTATGTCAGATTATGCAGGAGAAGTACGGGAAAGAAACC
GAACGGTGATCACGGAGTTGGAAGTAGTTCACATGAAAGCAGCGGAGGTG
ATACTTGGATATTTGCAGCGCATCAGTAATGCAGCAGCTATTGTCCCAAG
CTCAAACATGAGGGAATTATTTTCGTTTATTTAAAGTATAACAGTTTTGT
TGGCTCTGTTTTACTGCGGCATGTTCGCCATGCCCGCGTGCTCTGGCCGA
CAGAGTACATGGAAGACGTTCGTTCAGCAACGCTCACATGGTACCGATAT
TTTCTCACTTGTTTTTCTCAATCCTGCAGGAGCGAGGTGCGGTCACCGAC
ATGTTCGGGTTTGCAGCGAAGCAGGGTTGGCTCAAGGGTGGTTAGGGATG
ACGAAGCTCCATCGAATTGTTGGGCCCAAAGAACAACTGAAGTTACGGCT
GGGCAACCCGAGCAGAGCGCTTGTGCGTGTCCTCCCTCGATGGTTGCGGG
TATTGCGGGTAAACTATTTTTAGCAACTAGATAACTACCTTCCACTCTCA
GGGTTGAAAAGAATTTGTGTATGGACTCAAGCAACAGGAGGCTCCCATGT
AGAACGTGCGGGAACGAGAAGAGGAGATACAGAAGACAGCAAGTTGATGC
GGTCAAGACGTTTGTGAGGCCGCACTTGGGAGGACGACTCCTGCCTCCAT
GGCGCACCTTCGTGCCTTGTTGAATGACACGGGAAAAATTAAGAACGGGA
TGATTTTGAGGGGGCTTGAGGAAACGGAAATCCCAGAGGGGGCGAAGCCG
AC
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Coding sequence (CDS) from alignment at H-paniculata_contig2294:2692..8443+

>mRNA_H-paniculata_contig2294.6139.1 ID=mRNA_H-paniculata_contig2294.6139.1|Name=mRNA_H-paniculata_contig2294.6139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig2294:2692..8443+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTACTGCTACATTGGTGAAGAGCGCAATATGTCGAACGAGAACATA
TGGCTACTGCTACATTGGTGAAGAGCGCAATATGTCGAACGAGAACATCG
ACATTTCGGCCGAACCCGACACTTTTTTACTTCCCGGGGCTGTCTTCTAC
ACCATGGCACGACCCTAGCAAGTTCGCTTGGTGCCAAGAGTTGGAAAATA
ATGTCCCAGCCATCACCGCAGAGTACGAGGAACTCGTGCACCGAAGGCGA
CATTTCGGCCGAACCCGACACTTTTTTACTTCCCGGGGCTGTCTTCTACA
CCATGGCACGACCCTAGCAAGTTCGCTTGGTGCCAAGAGTTGGAAAATAA
TGTCCCAGCCATCACCGCAGAGTACGAGGAACTCGTGCACCGAAGGAAAA
CAGCATCAGACTATGACTCGGGCGGTGGTGGAGAGCATAAGCTTCATTCA
GGAAAGTGGGACTGGCACAGTTATGTTCTCAAGGGACACCGACAGGACGC
ATTTCGTCAGCATTGCCCACTAACTTCGAAAACAGCATCAGACTATGACT
CGGGCGGTGGTGGAGAGCATAAGCTTCATTCAGGAAAGTGGGACTGGCAC
AGTTATGTTCTCAAGGGACACCGACAGGACGCATTTCGTCAGCATTGCCC
ACTAACTTCGTCTCTCCTTGACGATGTCGCGAATCACATGTCTCTCCTTG
ACGATGTCGCGAATCACATGGTTGATACCCCGTTCTCTTTTTCGTTTTTC
TCCACCCTCCACGGAGGAGGCTCCATTGCGCCACACACGGCTCCCTGCAA
CCTTCGGATACGCGTCCACCTGCCGCTTATCGTTCCCTCTGAAGAACCGT
CGGAGTGTGGGATGAGAGTAGGCGCGGAAACCCGGCCATGGCGAAAAGGT
TGATACCCCGTTCTCTTTTTCGTTTTTCTCCACCCTCCACGGAGGAGGCT
CCATTGCGCCACACACGGCTCCCTGCAACCTTCGGATACGCGTCCACCTG
CCGCTTATCGTTCCCTCTGAAGAACCGTCGGAGTGTGGGATGAGAGTAGG
CGCGGAAACCCGGCCATGGCGAAAAGGAAAGTGCATGGTATTCGATGACT
CTTATGAGCACGAGGTGTGGAACAAGACTGATAAGGAGCGTGTTCTTCTT
CTGTTCGACCTGTGGCACCCGGAATTAGAGCAGGAGGAAAGTGCATGGTA
TTCGATGACTCTTATGAGCACGAGGTGTGGAACAAGACTGATAAGGAGCG
TGTTCTTCTTCTGTTCGACCTGTGGCACCCGGAATTAGAGCAGGAGGAGC
GAGGTGCGGTCACCGACATGTTCGGGTTTGCAGCGAAGCAGGGTTGGCTC
AAGGGTGGTTAGGAGCGAGGTGCGGTCACCGACATGTTCGGGTTTGCAGC
GAAGCAGGGTTGGCTCAAGGGTGGTTAG
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