mRNA_H-paniculata_contig22926.6134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22926.6134.1
Unique NamemRNA_H-paniculata_contig22926.6134.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: D8LNS8_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS8_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.240e-12
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 1 
Query:   22 YNMPFYLQYLATWPEYFLMKEAPDGTPMGY 111
            YNMPFYLQYL TWPEYFL+KE+PDGTPMGY
Sbjct:   27 YNMPFYLQYLTTWPEYFLIKESPDGTPMGY 56
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: A0A212CB22_CEREH (N-acetyltransferase domain-containing protein n=1 Tax=Cervus elaphus hippelaphus TaxID=46360 RepID=A0A212CB22_CEREH)

HSP 1 Score: 58.9 bits (141), Expect = 1.670e-9
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 1 
Query:   16 AQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEFEYARVYFVFG 150
             QY +PFYLQYLA WPEYF++ EAP G  MGYS++     + V G
Sbjct:   64 GQYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSKYNTTSAFLVTG 108
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: Q9DB82_MOUSE (N-alpha-acetyltransferase 20 n=15 Tax=Euteleostomi TaxID=117571 RepID=Q9DB82_MOUSE)

HSP 1 Score: 58.9 bits (141), Expect = 2.590e-9
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 1 
Query:    1 LCPTPAQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEFEYARVYFVFG 150
            L P    Y +PFYLQYLA WPEYF++ EAP G  MGYS++     + V G
Sbjct:   20 LDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSKYSTTSTFLVMG 69
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: A0A8B9NGN3_9AVES (Uncharacterized protein n=1 Tax=Accipiter nisus TaxID=211598 RepID=A0A8B9NGN3_9AVES)

HSP 1 Score: 56.6 bits (135), Expect = 3.350e-9
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    1 LCPTPAQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSE 117
            L P P QY +PFYLQYLA WPEYF++ EAP G  MGYSE
Sbjct:   21 LNPAP-QYGIPFYLQYLAHWPEYFVVAEAPGGELMGYSE 58
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: UPI00001EE8F9 (N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), isoform CRA_c n=1 Tax=Mus musculus TaxID=10090 RepID=UPI00001EE8F9)

HSP 1 Score: 55.1 bits (131), Expect = 7.500e-9
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:    1 LCPTPAQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEF 120
            L P    Y +PFYLQYLA WPEYF++ EAP G  MGYS++
Sbjct:   20 LDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSKY 59
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: G1PUS3_MYOLU (N(alpha)-acetyltransferase 20, NatB catalytic subunit n=5 Tax=Amniota TaxID=32524 RepID=G1PUS3_MYOLU)

HSP 1 Score: 57.4 bits (137), Expect = 1.030e-8
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 1 
Query:    1 LCPTPAQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEFEYARVYFVFG 150
            L P    Y +PFYLQYLA WPEYF++ EAP G  MGYS++       V G
Sbjct:   20 LDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSKYNATSTVLVMG 69
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: A0A5J5MRW5_MUNRE (N-acetyltransferase domain-containing protein n=3 Tax=Laurasiatheria TaxID=314145 RepID=A0A5J5MRW5_MUNRE)

HSP 1 Score: 57.4 bits (137), Expect = 1.040e-8
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:   22 YNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEFEYARVYFVFG 150
            Y +PFYLQYLA WPEYF++ EAP G  MGYS++     + V G
Sbjct:   30 YGIPFYLQYLAHWPEYFIVAEAPGGELMGYSKYNTTSAFLVMG 72
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: A0A7L4G954_9COLU (NAA20 acetyltransferase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L4G954_9COLU)

HSP 1 Score: 57.0 bits (136), Expect = 1.630e-8
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 LCPTPAQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSE 117
            L  T  QY +PFYLQYLA WPEYF++ EAP G  MGYS+
Sbjct:   25 LTSTAPQYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSD 63
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: S9WA97_CAMFR (N-alpha-acetyltransferase 20, NatB catalytic subunit n=1 Tax=Camelus ferus TaxID=419612 RepID=S9WA97_CAMFR)

HSP 1 Score: 57.0 bits (136), Expect = 1.650e-8
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 1 
Query:   19 QYNMPFYLQYLATWPEYFLMKEAPDGTPMGYSEF 120
            QY +PFYLQYLA WPEYF++ EAP G  MGYSE+
Sbjct:   37 QYGIPFYLQYLAHWPEYFIVAEAPGGELMGYSEY 70
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BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Match: A0A7L3KKA4_9PASS (NAA20 acetyltransferase (Fragment) n=38 Tax=Aves TaxID=8782 RepID=A0A7L3KKA4_9PASS)

HSP 1 Score: 56.2 bits (134), Expect = 2.570e-8
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 1 
Query:   16 AQYNMPFYLQYLATWPEYFLMKEAPDGTPMGYS 114
            AQY +PFYLQYLA WPEYF++ EAP G  MGYS
Sbjct:   19 AQYGIPFYLQYLAHWPEYFIVAEAPGGELMGYS 51
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22926.6134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNS8_ECTSI2.240e-1290.00N-acetyltransferase domain-containing protein n=2 ... [more]
A0A212CB22_CEREH1.670e-955.56N-acetyltransferase domain-containing protein n=1 ... [more]
Q9DB82_MOUSE2.590e-952.00N-alpha-acetyltransferase 20 n=15 Tax=Euteleostomi... [more]
A0A8B9NGN3_9AVES3.350e-969.23Uncharacterized protein n=1 Tax=Accipiter nisus Ta... [more]
UPI00001EE8F97.500e-960.00N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae... [more]
G1PUS3_MYOLU1.030e-852.00N(alpha)-acetyltransferase 20, NatB catalytic subu... [more]
A0A5J5MRW5_MUNRE1.040e-855.81N-acetyltransferase domain-containing protein n=3 ... [more]
A0A7L4G954_9COLU1.630e-864.10NAA20 acetyltransferase (Fragment) n=5 Tax=Neognat... [more]
S9WA97_CAMFR1.650e-870.59N-alpha-acetyltransferase 20, NatB catalytic subun... [more]
A0A7L3KKA4_9PASS2.570e-872.73NAA20 acetyltransferase (Fragment) n=38 Tax=Aves T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22926contigH-paniculata_contig22926:120..269 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score61.2
Seed ortholog evalue1.3e-07
Seed eggNOG ortholog2880.D8LNS8
Preferred nameNAA20
KEGG koko:K17972
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000001,GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010498,GO:0010941,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0031248,GO:0031365,GO:0031414,GO:0031416,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0033554,GO:0034212,GO:0034976,GO:0036211,GO:0036503,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043523,GO:0043524,GO:0043543,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048308,GO:0048311,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051276,GO:0051493,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051646,GO:0051716,GO:0060548,GO:0065007,GO:0071704,GO:0071840,GO:1901214,GO:1901215,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902493,GO:1902494,GO:1990234
EggNOG free text desc.N-terminal peptidyl-methionine acetylation
EggNOG OGsCOG0456@1,KOG3234@2759
EC2.3.1.254
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Exons1
Model size150
Cds size123
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929640.8201663-CDS-H-paniculata_contig22926:119..2421622929640.8201663-CDS-H-paniculata_contig22926:119..242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22926 120..242 -
1691480947.3725502-CDS-H-paniculata_contig22926:119..2421691480947.3725502-CDS-H-paniculata_contig22926:119..242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22926 120..242 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929640.83555-UTR-H-paniculata_contig22926:242..2691622929640.83555-UTR-H-paniculata_contig22926:242..269Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22926 243..269 -
1691480947.3841274-UTR-H-paniculata_contig22926:242..2691691480947.3841274-UTR-H-paniculata_contig22926:242..269Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22926 243..269 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22926.6134.1prot_H-paniculata_contig22926.6134.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22926 120..242 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22926.6134.1

>prot_H-paniculata_contig22926.6134.1 ID=prot_H-paniculata_contig22926.6134.1|Name=mRNA_H-paniculata_contig22926.6134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
MPFYLQYLATWPEYFLMKEAPDGTPMGYSEFEYARVYFVFG
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mRNA from alignment at H-paniculata_contig22926:120..269-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22926.6134.1 ID=mRNA_H-paniculata_contig22926.6134.1|Name=mRNA_H-paniculata_contig22926.6134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=150bp|location=Sequence derived from alignment at H-paniculata_contig22926:120..269- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCTGTCCAACGCCTGCTCAGTACAACATGCCGTTTTACCTACAATACTT
GGCCACATGGCCAGAGTACTTCCTCATGAAGGAGGCACCCGACGGCACCC
CGATGGGCTACAGTGAGTTCGAGTACGCTAGGGTATATTTCGTCTTTGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig22926:120..269-

>mRNA_H-paniculata_contig22926.6134.1 ID=mRNA_H-paniculata_contig22926.6134.1|Name=mRNA_H-paniculata_contig22926.6134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=246bp|location=Sequence derived from alignment at H-paniculata_contig22926:120..269- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGTTTTACCTACAATACTTGGCCACATGGCCAGAGTACTTCCTCAT
GAAGGAGGCACCCGACGGCACCCCGATGGGCTACAGTGAGTTCGAGTACG
CTAGGGTATATTTCGTCTTTGGGATGCCGTTTTACCTACAATACTTGGCC
ACATGGCCAGAGTACTTCCTCATGAAGGAGGCACCCGACGGCACCCCGAT
GGGCTACAGTGAGTTCGAGTACGCTAGGGTATATTTCGTCTTTGGG
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