mRNA_H-paniculata_contig22907.6125.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A6H5JKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKM5_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.600e-92 Identity = 162/242 (66.94%), Postives = 191/242 (78.93%), Query Frame = 1
Query: 1 QVEGMNEDDVKAALNAMVSNK---PTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITL 717
+V G E DVK+AL AMVSNK P + +DDD FGSY+TNEELVAAAGGG+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+S +SWGVSASVS FGG A+A SAD + E T A+ VETIICPMKSFRIPVS+M M++EALD A++VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+TL
Sbjct: 77 KVPGKTEADVKSALMAMVSNKKGVPADQG-EDDDLLFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSCTSWGVSASVSSFGGAASASVSADSSETEGGTGEAKGSNAFSANSKTTTTSASTVETIICPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTL 317
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FI44_ECTSI (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI44_ECTSI) HSP 1 Score: 296 bits (759), Expect = 1.070e-91 Identity = 161/241 (66.80%), Postives = 191/241 (79.25%), Query Frame = 1
Query: 1 QVEGMNEDDVKAALNAMVSNK---PTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTIT 714
+V G +E +VK+AL AMVSNK P + +DDD GS++TNEELVAAAGGG+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+SS+SWGVSASVS FGG A+A SAD + EE T AT VETI CPMKSFRIPVS+M M++EALD AL+VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+T
Sbjct: 189 KVPGKSEAEVKSALMAMVSNKKGVPADQE-EDDDPLCGSFDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSGTEEGTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDHALEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMT 428
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FI45_ECTSI (MACPF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI45_ECTSI) HSP 1 Score: 243 bits (619), Expect = 1.960e-70 Identity = 126/196 (64.29%), Postives = 153/196 (78.06%), Query Frame = 1
Query: 148 GLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETEV 735
G+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+SS+SWG S SVS FGG + ++ N ATMVETI CPMKSFRIPVS+M M++EALD A++VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+T+T+E+EV
Sbjct: 437 GMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGASTSVSSFGGA-----------VGDDKNESKTSNAFSANNKKTTTSATMVETITCPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTMTTESEV 621
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FTW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW7_ECTSI) HSP 1 Score: 166 bits (420), Expect = 3.620e-43 Identity = 98/219 (44.75%), Postives = 133/219 (60.73%), Query Frame = 1
Query: 88 DDNF-FGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETEVKQ 741
+DNF GSY +NEELVA A GG ALYG+NFFP DD+ KPY P+L P Y+++ GA + F A V QTT MS S F ++ G S+A ++S G S S + + T G+ +A+ E T AT++E I CPMKSFRIP++ M +S++A +AL+VD++ A ++LD FGSHVSNGR LGGIF+ T+T+TS K
Sbjct: 497 EDNFGTGSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEMTGAVSDFTARVWQTTSMSKVSAFHNISETSGDSMATKIATSEGSSRSNATWFTGKTKGSG--NATSGETTEASEEEKSLQRANSQTTSSATVIEYIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGRQELGGIFYSTLTMTSSEATKS 713
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A6H5JEU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU4_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 6.320e-18 Identity = 61/198 (30.81%), Postives = 81/198 (40.91%), Query Frame = 1
Query: 88 DDNF-FGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGR 678
+DNF GSY +NEELVA A GG ALYG+NFFP DD+ KPY P+L P Y+++ + I CPMKSFRIP++ M +S++A +AL+VD++ A ++LD FGSHVSNGR
Sbjct: 372 EDNFGTGSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEMHDTQG---------------------------------------------------------------------------------------MRDIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGR 482
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A820FWS9_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820FWS9_9BILA) HSP 1 Score: 84.0 bits (206), Expect = 8.810e-15 Identity = 62/209 (29.67%), Postives = 105/209 (50.24%), Query Frame = 1
Query: 106 SYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETE 732
+Y+++E+++ GG+AL GI+ + ++ + PLL +P+ L S + T + ++ FT+T G+++A S+S + + +GF S EE +N AT VE + PMK FRI M++S EA + +KVDTL +A +L FGSH+S+G +GG+F +T+T+ +E E
Sbjct: 340 AYKSDEDIIERISGGIALCGIDL-TDPKKLSERIDRPLLSRPISCLLKSPSLTGGKKSKTFTSLEASNQFTQTIKTSGITVATDISASVLIVHANAGF-----------SRSSEERSNSSDQQRTLSKI-------ATRVEYVSAPMKCFRISPEEMKLSTEAENELIKVDTLPRASVFLHRFGSHLSDGTQHIGGVFIRTVTVKAEEE 529
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A819SIA4_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819SIA4_9BILA) HSP 1 Score: 78.6 bits (192), Expect = 6.010e-13 Identity = 58/209 (27.75%), Postives = 101/209 (48.33%), Query Frame = 1
Query: 106 SYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETE 732
+Y+T+E+++ GG+AL GI+ + ++ + PLL +P+ L E T + ++ FT+T G+++A ++S+ + + GF S E+ N A ++ P+K FRI M++S EA + +KVDTLLKA +L FGSH+S+G +GG+F + +T+ +E E
Sbjct: 352 AYKTDEDVIERISGGIALCGIDL-TDPKRLSQRIDRPLLSRPISCPLKSPRLPGEKKSTTFTSLDASNQFTQTIKMSGITVATELAASFSIVHASIGF-----------SISSEKSLNSSNQQKKLSKI-------AIRIDYDSVPIKCFRISPEEMKLSTEAENELIKVDTLLKARDFLHRFGSHLSDGTQHIGGVFIRMVTVKAEEE 541
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A1V9Y600_9STRA (VLIG-type G domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y600_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.950e-13 Identity = 65/201 (32.34%), Postives = 95/201 (47.26%), Query Frame = 1
Query: 115 TNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITL 717
++E++VA A GG ALYG+N + +T + P+L++P L G + T +S AS F + + G S A S+G + +G+ + G + EET A V P+KSFR +SMR+S+EA+ +A V A +LD FGSHVS G + LGGIF+KT L
Sbjct: 77 SDEQVVARASGGAALYGVNLGMSEVHLTQRAPRPILQQPETCSLNGPILGSTVMEMTFTSISAASNFRSSVKSCGNSFAIDIHGSFGFFGASAGY----SRGRQSAKGGKSEETTKTTS--------------AAHVRYAFEPVKSFRFAQTSMRLSEEAITAARDVTNEEAADYFLDDFGSHVSCGDYHLGGIFWKTTEL 259
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A024UML5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UML5_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 7.760e-11 Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 1
Query: 34 AALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINF----FPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSE 726
A+ +++N+ +S A G T E+L+A A GG ALYG+ + + +P PLL +P G +++ SV Q + + A+ F +T G S+ A + AS +G GG XXXXXXXXXXXXXXXXX A V PM+SFR+ V M++SDEA A + + A +L FGSH G H +GGIF KT+ +T++
Sbjct: 81 ASFEKLMANELSSSAT------HGDALTREQLIAQASGGAALYGVGLGIVTSADRTGILQRPENPLLAQPTSCAFMGPTSAVTTSVEQFSTVQAATDFRQTMKTCGRSMGLA------LKASYAGVGGX------------XXXXXXXXXXXXXXXXXXXXXXSAAQVTYAYVPMQSFRMTVQDMQLSDEAKAVAATITNEMAATYFLQDFGSHAVCGVHEVGGIFCKTVEITTK 291
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A3R6V6B4_9STRA (VLIG-type G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6V6B4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 9.010e-11 Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 1
Query: 34 AALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINF----FPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSE 726
A+ +++N+ +S A G T E+L+A A GG ALYG+ + + +P PLL +P G +++ SV Q + + A+ F +T G S+ A + AS +G GG XXXXXXXXXXXXXXXXX A V PM+SFR+ V M++SDEA A + + A +L FGSH G H +GGIF KT+ +T++
Sbjct: 81 ASFEKLMANELSSSAT------HGDALTREQLIAQASGGAALYGVGLGIVTSADRTGILQRPENPLLAQPTSCAFMGPTSAVTTSVEQFSTVQAATDFRQTMKTCGRSMGLA------LKASYAGVGGX------------XXXXXXXXXXXXXXXXXXXXXXSAAQVTYAYVPMQSFRMTVQDMQLSDEAKAVAATITNEMAATYFLQDFGSHAVCGVHEVGGIFCKTVEITTK 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22907.6125.1 >prot_H-paniculata_contig22907.6125.1 ID=prot_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp MNEDDVKAALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALYback to top mRNA from alignment at H-paniculata_contig22907:310..2868- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22907.6125.1 ID=mRNA_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2559bp|location=Sequence derived from alignment at H-paniculata_contig22907:310..2868- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22907:310..2868- >mRNA_H-paniculata_contig22907.6125.1 ID=mRNA_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at H-paniculata_contig22907:310..2868- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |