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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 523 |
| Cds size | 459 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2287.6108.1 >prot_H-paniculata_contig2287.6108.1 ID=prot_H-paniculata_contig2287.6108.1|Name=mRNA_H-paniculata_contig2287.6108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MDLSSSRVQFLRASTPVRHRDNGVNFIKKLAPTGSHKKPAPVFGQKLDDA
DPSVFLPRSSSFESQPLGPQPQMIEIKALSYSIGNAAAADNTNDSNASSQ
HRQHSAVLAGSGAAALSTVTTHAAVTVNNNGVVKISNNSEVTSDHANGVA
EGR back to topmRNA from alignment at H-paniculata_contig2287:4726..7932+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2287.6108.1 ID=mRNA_H-paniculata_contig2287.6108.1|Name=mRNA_H-paniculata_contig2287.6108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3207bp|location=Sequence derived from alignment at H-paniculata_contig2287:4726..7932+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGACACCCGTGCGGCGCGGTTCCGGGGGGGGTATGACGGTGGAAGTCAT
AGTTAGGCAAGTATGGATCTGTCTTCTAGTCGAGTACAGTTTTTACGAGC
TTCGACGCCGGTCAGACACCGAGACAACGGCGTTAACTTCATGTGAGCTC
TCTCTGCTGGCAGTAGTCGTCACTCAGTACTGGAGAGAGTACAATCAGCA
CAGGAAATACTGTAGTGTCCGCAAGGTAAAGTGCATTACACAACTGGAGG
GTACAAGATAGCTTCAGTGTTTAGCTTGGTCACTTTCCAGGACAAAGCAC
TTGCGCCTCCAGAGTCAAGTTTACGTTGTTGCAATGATGGTGCTTGCAGA
TTTTGCATGACCTCTTGGCTCAATTTGTATATACGCCTAAATTACTACAC
AGTGTGTGCGTGTATACTGCAGTGCGAAGCTTCGAAAAAAACAACAGATA
ATTTACGCACGTACGAACAATCCGGCTGCTCGGTGCTGGGGTCCCCAATG
GGCTCGGCATCATGTACCCGCACACTGCTGGGCATATATAGGCATGGCCG
TTAGCCGTGTTGACTGCCTCGTGCTGTATTCGTGCGGCACAGTATGTAGC
TGTGATTGTCATATCAAGCCTCCCTCAAAAATTGCTTTATTCATGTACGA
TCGGCACACAGGTGCTGTCACAGAGATCGCACAATACAAAATGTCGAATG
CAATGCGCTAGTGTCTCATTCCCTCAGCCATAAGCTTGGACATCACGAGC
ACCTCTGTCGTGTTGGGGTGTACCCTTATAGCATTGCGCAGTCGTATGGT
GTGCTGCAGTAGTGAGTTGCCGAGGGTGCACTCTTACTTTTGTCTTATTA
TTAACTCCAGGTCAGCGACCACAGTACAGCCAGTGCAGTGTTGAGTAAAA
CACACTATTAATATTAATACAAGAAACCGACTGTAGGTTACTTTCCGTCG
AACCTCGTGAACAAATAGGATCGTATAATTAATTGTTACATACGGTATTG
CCCCCGAGCATATCGAAACTCAACTAGTACATAAGAATGTGAGCATCAAA
TTATGGAAATTCCAAGAAGTTCCCTCTTGACCATGGAGGATGTTCTGGGC
GAAAATGAAGAAATCTGGAAACCTGGAAATCTCGGGCCGAAATTTAGAGC
TAAACCTTTTCAGTTTCCAATTGAGATGTGTGTGTCGTTTGAAATTTATA
CTTACCGAAAGCCAGAAGAGCTGAAATCTAGTCAGTGTACACACCGATAT
CGAACCCATCGTGCCTTATATCCGACGGTCTACTTCAACAGAGGATACTG
TACGGTCTTCACTCTGGTACGGTATCACCTTCTCCGCTGGCACGTAGTTC
CTCAACTCACACCAAAACACGTGCTGATCAGGGGGGTGTGTATGTGTGCT
TATCCCGGGGTTTCATTAACAACAGGGAAAAAGTATACTCGACACCTATT
GGGTGACAATGTATCAGTCCTTCTAATTGGCGTGTACCCACTACACTGTA
CTATACTATACTGTACTGTACTGTAGAATATTGCCTTCGTTTTGTGTACT
ACATCACGGAATTGTGATATTTTGCCCACGGCCGCGGGGATCACTTGGCT
CTGCCGTTTTTTTGCGTTATTTGGTGCACCACAGGATTCATACATCGTAT
GTACATGCACCCCCCTTAACCGGTTACTTTCTGGGTAAGTCATCACTTGC
CGCACGAACCTCGAATTTGCTTGATTTATCTTCATGATTCCTACTTACAC
ATTCTCCTGCTTTTGCTGTTGGCGAGTTCCAATTTTGAAGGTTTGACTTC
CCTCGGCTCTAATTTTGCTGATGAGTATACTATAGGTGATCCAGTTTTTT
CGTACCTCAAACTTTGACCCCTCCCCCCCCTCCCCCGTCCCCTCGTTCCC
GTGCCCCGCTCCGGCAGCAAAAAGTTAGCCCCCACCGGTAGCCACAAGAA
GCCCGCACCAGTATTTGGGCAGAAGCTAGACGATGCTGATCCCTCTGTCT
TCCTCCCGAGATCGTCATCGTTCGAGTCCCAGCCTCTCGGCCCCCAGGCA
AGCAGAACACCCTGACTCTAGTTTTTTGTGTGAGCTACCTGATGTTATAC
CGGAGAAAACTTTACTGTAGTACACAACTGTCGATTCCAAAGTGGACGAA
TGCAAGACACGTGCACCGAGGCGTTACACTCCCAGCTTCGGACCGCGCAT
CTCGATCATTTGATGGATTCAAGCGTAGGAAAGAAACAAACGAACGTGAT
GTCGTGTCGGCAGCAAGCGACGATTGGTGGTGTGTGTGTTTTTGGCTGTA
GAGATTGAAGATGGAAAACTAAAACTAGACAAAGTTGATGGATTTTCATT
CTTCGTCGCAGTTTCCTGCCAGCCTCTTGTGGTTTTGTTTTTGGAGGAAT
TAGTGCTACAGCAGATGTGATTCTCATAGATTTTCACATTACGCTTCACG
TACTCCATGAAAAATACGATATATTATTTCCTATCATAATAGAGCGTTTG
CGCAGAATGAGCTCCTTTTGCAAATTTCCATTTGGTCGTGTATAGCTAAC
AATGATCTCCTCGTCCTGGTCCCCAGCTCATTCTCACCAATGTCTTGGTA
CAATAGGAATTCAAGTAACAAAATTCGTCTGTTTCGTGAGCGATACGGAT
ATTGCAGTCACTGGCTGTTAAAAGGAATTCGTTTTGTAACAAGACGTTGT
TATAGATAAACTCGGGTCCAGGACAAGGAGATCACTATTAGCTATACACG
ACCAAATCGACCTTTACAAACGGAAAATTTCTTGCGCAAATCCTCTATTC
GACAAATCCGAAACACCGAAAATGTACATAAAACACTGATGAAATGCTGT
GTTATGACGACCTCTGATAATCCTCAAATCCCCCCCAGGCTCACCCGCCC
CCCCTCCCCCTCCCAATCTGGCTTCACAAAAAATCTCGAAAATATCCACC
ACCACTAGCCCCAGATGATCGAGATTAAAGCCCTGTCTTACAGCATTGGC
AACGCCGCCGCTGCCGACAACACGAACGACAGCAACGCCTCCTCCCAGCA
TCGACAACACTCTGCCGTTCTCGCCGGCAGCGGGGCTGCGGCACTCTCCA
CAGTAACGACTCACGCAGCCGTGACGGTCAACAACAACGGTGTTGTAAAA
ATATCGAATAATAGCGAGGTGACTTCTGATCATGCTAACGGAGTGGCCGA
AGGTAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2287:4726..7932+ >mRNA_H-paniculata_contig2287.6108.1 ID=mRNA_H-paniculata_contig2287.6108.1|Name=mRNA_H-paniculata_contig2287.6108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig2287:4726..7932+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATCTGTCTTCTAGTCGAGTACAGTTTTTACGAGCTTCGACGCCGGT
CAGACACCGAGACAACGGCGTTAACTTCATATGGATCTGTCTTCTAGTCG
AGTACAGTTTTTACGAGCTTCGACGCCGGTCAGACACCGAGACAACGGCG
TTAACTTCATCAAAAAGTTAGCCCCCACCGGTAGCCACAAGAAGCCCGCA
CCAGTATTTGGGCAGAAGCTAGACGATGCTGATCCCTCTGTCTTCCTCCC
GAGATCGTCATCGTTCGAGTCCCAGCCTCTCGGCCCCCAGCAAAAAGTTA
GCCCCCACCGGTAGCCACAAGAAGCCCGCACCAGTATTTGGGCAGAAGCT
AGACGATGCTGATCCCTCTGTCTTCCTCCCGAGATCGTCATCGTTCGAGT
CCCAGCCTCTCGGCCCCCAGCCCCAGATGATCGAGATTAAAGCCCTGTCT
TACAGCATTGGCAACGCCGCCGCTGCCGACAACACGAACGACAGCAACGC
CTCCTCCCAGCATCGACAACACTCTGCCGTTCTCGCCGGCAGCGGGGCTG
CGGCACTCTCCACAGTAACGACTCACGCAGCCGTGACGGTCAACAACAAC
GGTGTTGTAAAAATATCGAATAATAGCGAGGTGACTTCTGATCATGCTAA
CGGAGTGGCCGAAGGTAGGCCCCAGATGATCGAGATTAAAGCCCTGTCTT
ACAGCATTGGCAACGCCGCCGCTGCCGACAACACGAACGACAGCAACGCC
TCCTCCCAGCATCGACAACACTCTGCCGTTCTCGCCGGCAGCGGGGCTGC
GGCACTCTCCACAGTAACGACTCACGCAGCCGTGACGGTCAACAACAACG
GTGTTGTAAAAATATCGAATAATAGCGAGGTGACTTCTGATCATGCTAAC
GGAGTGGCCGAAGGTAGG back to top
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