mRNA_H-paniculata_contig2280.6084.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI) HSP 1 Score: 621 bits (1602), Expect = 6.390e-194 Identity = 393/761 (51.64%), Postives = 438/761 (57.56%), Query Frame = 1
Query: 1 HNQAECSRFFGDDLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTP--KKKAEGDGAGTA------------DFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAASKNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPR-----HGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGMLGQAAGVVAKVVENGGESNDVADDVGNEVWSADEDYAYLAAEHLADSVARD 2226
H +AECSR+FGD LLRPVAYAG R++LA LGL A + T ++G GA A + ANV+ITSY+VLR+DAE+LG+Q WLYLVLDEAHLLRNP T AKAARAL+S+HRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVR ALSS+GDGRATVEGLQ+LE LHRQVLPFVLRREK EVLADLP KIITE++C+LT QRRLH IWERG + G KTT+ + AA RLS GAQTLACLS+LQLLCVHP+LV EE KRR S ++ LSGKLMALRELLWDAGIG+ S P+ + P G P + +A T+ DG + +PG KCL+FAQHKAALDVTESALLRP FP V LR+DGSVSQ ERAAAVDRFS DP+V +LLLTTRVGHLGLNL AASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADS+EQRVLRLQGHKL VAAAVV ENA+AF+ GTG VLGMLG+A VVA D E+WSADEDYAYLAAE LADSVAR+
Sbjct: 1761 HWKAECSRYFGDGLLRPVAYAGPPQARRRLAGRLGL-GPAGNDKDRNGTSGGADGSQGPGADGATXXXXXXXXXXPERANVVITSYNVLRTDAEVLGKQGWLYLVLDEAHLLRNPATRTAKAARALRSNHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRAALSSDGDGRATVEGLQQLEKLHRQVLPFVLRREKSEVLADLPSKIITEMVCDLTPEQRRLHNIWERGDSQGK---------------------------KTTTEASR------------------AAAPTGRLSAGAQTLACLSKLQLLCVHPSLVTPEEGTKRREMSADVKLSGKLMALRELLWDAGIGKRSSSSRAPAESTGKGGKPXXXXXTRGKGSLPRQEEAT------------------------------------------------------------------------------------TAGDG-----------------------------------------------------------VASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVLGMLGEAMAVVAXXXXXXXXXX-XXDGESVELWSADEDYAYLAAERLADSVARE 2331
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE) HSP 1 Score: 497 bits (1279), Expect = 2.680e-152 Identity = 370/723 (51.18%), Postives = 419/723 (57.95%), Query Frame = 1
Query: 1 HNQAECSRFFGDDLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTPKKKAEGDGAGTA-------------------DFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQ----------------VLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTA----------------------AERLRENAAAAAAKTTSAGTA-PEPSAKDGAGPISDVGIATAAQRS---------------RLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAASKNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCET--ANASSSSNSNTSLDQNKITSRDGREENAG---GCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTR-------MPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLG 1914
H +AECSR+FGD LLRPVAYAG R++LA LGL P+ + GD G+ + ANV+ITSY+VLR+DA++LG+Q WLYLVLDEAHLLRNP T AKAARAL+S+HRVGLTGTPIQNSVLELWSLFEFLMPG RSFQR VARPVR ALSS+GDGRATVEGLQELE LHRQ VLPFVLRREK EVLADLP KIITE++C+LT QRRLH IW RGG GG VLAAVA+ E + A +ER E TT+A T P +A G D G ATA R RLS GAQTLACLS+LQLLCVHP+LV EE KRR S+++ LSGKLMALRELLWDAGIG+S ++VD S D D + XXXXXXXXXXXXXXXXXXX R G E + A ++ S N TS G+ + G SS+R S+++ A +S GK G K P S +R G R T +PGCKCLIFAQHKAALDVTESALLRP FP V LR+DGSVSQ ERAAAVDRFS DP+V +LLLTTRVGHLGLNL AASMVVFLEHDWNPQVDLQ A LG
Sbjct: 892 HWKAECSRYFGDGLLRPVAYAGPPLARRRLAGRLGLG------PAGNHKDRNGTNGDADGSQGPGTDGAKASAAVEEEEEPERANVVITSYNVLRTDADVLGKQGWLYLVLDEAHLLRNPATRTAKAARALRSNHRVGLTGTPIQNSVLELWSLFEFLMPG-----RSFQRHVARPVRAALSSDGDGRATVEGLQELEKLHRQAGSRSPMLLWIVLVVAVLPFVLRREKSEVLADLPSKIITEMVCDLTPEQRRLHNIWARGGDGGRVLAAVAQAEEMEAARLRAVAXXXXXXXXXXXXXXXXSERSAEPTGHVDGPTTAAPTPFPAVTATGGDSAAGDGGAATADSRGKNTTTEASRAAAPTGRLSCGAQTLACLSKLQLLCVHPSLVAPEEGTKRREMSEDVKLSGKLMALRELLWDAGIGKS----------------------------ESVDIGSSDSDTGTVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGRNSRGGPEGGGSRAGYTNPSPAKAGPNSSTSSPGKLDTKRPTVGTAGSSVRAARSSSSRAPA----ESTGKGG----KPPPTSTTRGKGSLPRQEEATTAGDGVASPLPGCKCLIFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQVRGCAGVLG 1567
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A835Z4M3_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M3_9STRA) HSP 1 Score: 317 bits (811), Expect = 8.630e-94 Identity = 251/750 (33.47%), Postives = 313/750 (41.73%), Query Frame = 1
Query: 1 HNQAECSRFFGDDLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTPKKKAEGDGAGTADFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEG--DGRATV-EGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVL--------AEESDKRRAASKNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGMLGQAAGVVAKVVENGGESNDVADDVGNEVWSADEDYAYLAAEHLADSV 2217
H QAE +RF G + YAG +KRKQLA +++TSY V++ D L + W YL+LDEAHLLRNPN+ VA A RAL S HR+ LTGTPIQN+V E+W++F+ +MPGYLG+R F+ P R L S G G V EG++ L+ LHRQVLPFVLRREK +VLADLPPKIIT++ C + QR+ ++ R G A A Q + V L+ QL CVHPALVL A+ AAS L S KL+ALR+LLWD GIG S DG + +A G ++ R KCL+FAQHKAALD E LLR P V LR+DGS+ QD RAA ++RF++D AV LLLLTT VG LGLNL A V+FLEH WNPQVDLQAMDRAHR+GQR+AVNVYRL+A ++E+R+L LQ KL A VVG++NA+ ++ T VL + A + A +G E DE YA AE A SV
Sbjct: 85 HWQAEATRFLGAFFSHILVYAGIPAKRKQLATQFAAQA----------------------------LVVTSYPVVQRDWSTLSQSRWSYLILDEAHLLRNPNSAVAGAVRALHSDHRLALTGTPIQNTVAEVWAIFDLVMPGYLGERSDFKSSYVTPTRAVLESGGRVGGVGEVLEGMRVLDRLHRQVLPFVLRREKAQVLADLPPKIITDMACEMPPRQRQAYEQLCRAMRQGG----------------------------------------------------AAAEQGDKREV----FEWLTLQQLACVHPALVLNKTQPATGADAKTVAPAASMPLGDSCKLLALRQLLWDCGIGLQDCS-------------------------------------------------------------------------------------------------------------------DGSDADAEGVQQQLQR-----------------------------------------------------KCLVFAQHKAALDAAEQCLLRQHLPSVKYLRIDGSIGQDARAAVLERFTSDAAVSLLLLTTAVGGLGLNLTVADTVIFLEHHWNPQVDLQAMDRAHRIGQRRAVNVYRLVATGTVEERILLLQAGKLATAEKVVGKDNASLWSLDTDSVLQLFNAA--IDASGAADGSXXXXXXXAAAEERQLQDE-YASFDAERFAVSV 579
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A7R9Z664_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z664_9STRA) HSP 1 Score: 290 bits (741), Expect = 3.060e-84 Identity = 212/644 (32.92%), Postives = 294/644 (45.65%), Query Frame = 1
Query: 184 ADFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVL------------AEESDKRRAAS-KNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGML 2076
+D NV++T+YS+LR+D IL ++AW Y VLDE HLL+NP T A+AAR LKS HR+ LTGTP+QN V ELW+ F+FLMP +LG + +F ++ ARP++ + G+ +L LH+QVLPF+LRREK +V+ +LPPKIITEI CNL+ Q+ ++K + A EA + A E L KT++ G + G + L L L+L+C HP LVL + ESD + S L SGKL L +LL +GI ++ D +++ + A E +N + VL P GE L D + G KCLIFAQ +LD+ E L RP P + LR+DG V + R V+RF++D ++ LLLTTRVG LGLNL A V+FLEHDWNP VDLQAMDRAHR+GQ K VNVYRL+AA +IE++++++Q KL ++ A+V +N+T F+ GT +L +
Sbjct: 25 SDLCNVVVTNYSILRNDVNILTKKAWHYCVLDEGHLLKNPKTATARAARQLKSRHRLILTGTPVQNKVHELWAAFDFLMPNFLGSQSAFTKEYARPIQNGQLPDSSADKISLGMNKLRALHQQVLPFILRREKGQVMKELPPKIITEIPCNLSFEQQSMYKAF------------CARPEA-RKAIEELD--------KTSN-------------------GFDENENGYKAVWGKEVLKSLFCLRLVCTHPILVLRKKQQCCAGKSTSRESDSLSSVSFSKLDCSGKLRVLNDLLRSSGIYHEEMTGADNDDSL----------------------------------------------------LYIEGEATESENSL-----------VLQPV--------------------------------------------------------------------GEHLCTEEEDVD--------VKPHGSKCLIFAQFSQSLDIVEQYLFRPHMPSLRYLRLDGKVPPEGRTQIVERFNSDDSIKALLLTTRVGGLGLNLTGADTVIFLEHDWNPHVDLQAMDRAHRIGQTKTVNVYRLVAAGTIEEKIMKIQRSKLIMSNAIVNTDNSTMFSMGTDRLLDLF 489
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A7S4MQI5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQI5_9STRA) HSP 1 Score: 298 bits (762), Expect = 4.290e-81 Identity = 215/702 (30.63%), Postives = 315/702 (44.87%), Query Frame = 1
Query: 1 HNQAECSRFFGDDLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTPKKKAEGDGAGTADFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAE-----ESDKRRAASKNLHL----SGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGC-KCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGML 2076
H +E ++F + + Y+GS+ +RK L + ++ N+++T+YS+LR+D IL E+AW Y VLDE HLL+NP T A AAR LK HR+ LTGTP+QN V ELW+ F+FLMP +LG +F ++ ARP++ + G+ +L LH+QVLPF+LRREK +V+ +LPPKI+T+I C+L+ Q L+K A + EA Q E ++ ++D G +T S+G + L L L+LLC HP L+ A+ E++ R N H SGKL L +LL +G+ ++ D +++ +D+E E +N +ML N E+ N S D V MP KCLIFAQ +LDV E L +P P + LR+DG VS ++R V++F++D ++ LLLTTRVG LGLNL A V+FLEHDWNP VD+QAMDRAHR+GQ K VNVYRLI +++IE++++++Q KL ++ +V +N+T F+ GT +L +
Sbjct: 1479 HWVSEIGKYFAKGCFQVLRYSGSSKQRKAL---------------------------WSAKSNLCNIVVTNYSILRNDVNILTEKAWNYCVLDEGHLLKNPKTATALAARQLKCCHRLILTGTPVQNKVHELWAAFDFLMPNFLGSLSAFTKEYARPIQNGQLPDASADKISLGMNKLRALHQQVLPFILRREKGQVMKELPPKILTDIPCSLSPEQHNLYK------------ALCTQPEAKQAVKELEKK--------------------------LNDCGESTGTDEE--SLGREVLKSLLLLRLLCTHPVLLAAKKQSYGETEGERVLFLNSHAKLDCSGKLRVLNDLLRSSGVYHEEITGADNDDSLL-----------------YIDNEG-----------------------------------AESENDLML--------------NGESENVFS--------------------------------------------------------------------------DEDDVATMPSASKCLIFAQFSQSLDVVEQLLFQPHMPSLRYLRLDGKVSPEDRTHVVEKFNSDESIRALLLTTRVGGLGLNLTGADTVIFLEHDWNPHVDIQAMDRAHRIGQTKTVNVYRLITSETIEEKIIKMQQMKLKMSNEIVNTDNSTMFSMGTERLLDLF 1973
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A7S2URQ5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URQ5_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.330e-80 Identity = 204/643 (31.73%), Postives = 301/643 (46.81%), Query Frame = 1
Query: 196 NVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAAS----------------KNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGML 2076
+++ITSYS+LRSD ++L ++ WLY +LDE HLL+NP T A+A+R ++S +++ LTGTP+QN V ELW++F++LMP YLG F ++ A+P+ + G G ++L+ LH+QVLPF+LRR+K +VL +LPPK+I+ I C L Q RL+ + A A+ + A + +R K G+G S+G Q L + L+LLC HP LV ++ + + L SGKL L ELL AGI L+ D +D + +LD P PG+ +N +SS T ++G GG S+ G+ G +T + KCLIFAQ +LDV E L P P + LR+DG V +R+A VD+F+ D ++ +LLLTTR+G LGLNL A +V+FLEHDWNP VD+QAMDRAHR+GQ+K V+VYRL+ + +IE+++++LQG KL ++ A+V EN+T ++ GT +L +
Sbjct: 139 SIVITSYSILRSDIDLLAKKTWLYCILDEGHLLKNPRTATARASRRIRSRNKLILTGTPVQNRVNELWAVFDYLMPNYLGTESYFGKEFAKPISNSQLPGASGDEIHTGNEKLKGLHQQVLPFILRRDKQQVLKELPPKVISNIPCMLGPEQSRLYASF---CASPEAKEALNILHKALLPGDSIR---------------------KGGSGNHE-------CYFDENSLGNQVLKSMLYLRLLCTHPVLVSSKNKVTKNTKTGVITSKPTDLVGNGEYARLDCSGKLSILNELLRSAGIFHRELTAADN----------------------------------------------------------------DDSAIYLLDPP---------PGSSTVSNEFASS----------FTDKEG-----GGNSDISV--------------------------------------GECGFNTGLDSLQSSSKCLIFAQFTQSLDVVEQFLFEPHMPSLRYLRLDGRVPVADRSAIVDQFNQDESIKVLLLTTRIGGLGLNLTGADIVIFLEHDWNPHVDIQAMDRAHRIGQKKTVHVYRLVTSGTIEEKIMKLQGVKLAMSEAIVNSENSTMYSMGTDRLLDLF 624
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A7S4V0R0_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0R0_9STRA) HSP 1 Score: 281 bits (718), Expect = 5.190e-79 Identity = 222/714 (31.09%), Postives = 316/714 (44.26%), Query Frame = 1
Query: 1 HNQAECSRFFGD-DLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTPKKKAEGDGAGTADFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPI-SDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAAS--------------KNLHLSGKLMALRELLWDAGI--GESHLSPYDPSN----TISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGML 2076
H E +RFF D R Y GSA KRK L + A N+++TSYSVLRSD + L ++W+Y +LDE HLL+NP T A AAR L+ H++ LTGTP+QN V ELW+ F+FLMP +LG + F + A+P+ G+ +L+ LH+QVLPF+LRREK +V+ +LPPK IT+I C L+A Q +L+K + G EA ++L+ PI +D G+ ++ G L L L+L+C HP LVL++ +K + ++ L SGKL AL +LL +AG G+ + D S+ ++ G P + T S +A ++ DD +D+P+ S+D + S STA KCLIFAQ +LDV E L RP P + LR+DG + R VDRF+ D ++ ++LLTT+VG LGLNL AA VVFLEHDWNP DLQAMDRAHR+GQ K+VNVYRLI +IE++++++Q KL ++ A+V +N+T ++ GT +L +
Sbjct: 170 HWMNEINRFFPDGSCFRAFQYMGSAQKRKTLWPQI---------------------------AKDYNIVVTSYSVLRSDVKQLASKSWIYCILDEGHLLKNPKTATAIAARRLRCRHKLILTGTPVQNKVHELWATFDFLMPNFLGTEKWFGKHFAKPIINGQLPGAVPACIGLGMDKLKSLHQQVLPFILRREKGQVMKELPPKTITDIPCPLSADQMKLYKEFCAGSEAK---------EALNLLQKKLKS-------------------------PIQTDQGM-----DDDVTFGNNVLRSLLYLRLICTHPTLVLSKNRNKGKGSAITGSQSELIGDGKYARLDCSGKLSALNDLLRNAGFCHGDMTAADNDQSSLYIQSLDGGAEPNATSGAT-SLWNATEESFDD----------------------------------------FIDMPD-------------------------SIDDLNVPS--------------------STA-----------------------------------------------KCLIFAQFTQSLDVLEQFLFRPHMPSLRYLRLDGRTLPENRTVVVDRFNNDDSIRVMLLTTKVGGLGLNLTAADTVVFLEHDWNPHADLQAMDRAHRIGQEKSVNVYRLITPHTIEEKIMKMQQVKLAMSEAIVNSDNSTMYSMGTDRLLDLF 684
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A1E7FKF3_9STRA (SNF2_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKF3_9STRA) HSP 1 Score: 264 bits (675), Expect = 9.300e-75 Identity = 184/628 (29.30%), Postives = 276/628 (43.95%), Query Frame = 1
Query: 196 NVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAASKN----LHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVL 2067
N+I+TSY +LRSD + L + W Y +LDE HLLRNP T A+A+R L++ H++ LTGTPIQNSV E+W+ F+FLMP +LG F ++ ARP+ + + G+++L+ LH+QVLPF+LRREK +VL +LPPKIIT I C ++ Q L+ + G ++++ ++ ++ + A + S LS + L L L+LLC HP LV A + + + L SGKL+ALRELL DAG+ + L+ D D +L+ D E + ++ G +CLIF Q +LD+ E LL+ P V LR+DG V +R+ VD+F+ D ++ +LLLTT++G LGLNL A V+FLEHDWNP DLQAMDRAHR+GQ++ V+VY+L+ +SIE++ + + KL ++ A+V +N++ ++ GT +L
Sbjct: 106 NLIVTSYEILRSDIDALSKVNWTYCILDEGHLLRNPKTLTARASRRLRARHKLILTGTPIQNSVNEVWATFDFLMPNFLGSSSQFSKEFARPIIKGQNFDAAALDIATGIEKLKLLHQQVLPFILRREKEQVLKELPPKIITRIPCPMSTIQEDLYHRFCSDQQGKQSISSLDKI--------------------------------------VNTTHPSDANKSSMLSP--EVLKSLLYLRLLCTHPWLVRANKQGPKNQHMHDSRYILEASGKLVALRELLRDAGMNFNELTAAD-----------------------------------------------------------------NDSSLLYCDKDE---------------------------------------------------------------------------------------------EEQNISDRNGSRCLIFGQFTNSLDIVEELLLKRHMPSVEYLRLDGRVPASKRSGIVDKFNRDDSIKILLLTTKIGGLGLNLTGADTVIFLEHDWNPHTDLQAMDRAHRIGQKRTVHVYQLVTMNSIEEKTMLIHERKLAMSKAIVNTDNSSMYSMGTDRLL 535
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: UPI00193A5E43 (LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A5E43) HSP 1 Score: 271 bits (692), Expect = 3.910e-72 Identity = 206/698 (29.51%), Postives = 283/698 (40.54%), Query Frame = 1
Query: 13 ECSRFFGDDLLRPVAYAGSASKRKQLAKHLGLTNTAPSPPSAEVTPKKKAEGDGAGTADFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLA----------EESDKRRAASKNLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVLGML 2076
E RF G L P+ Y G+ +R++L L N ++I SY V+R+D E + W Y +LDE H++RN + + ++L+S+HR+ LTGTPIQNSVLELWSLF+FLMPG+LG F +P+ + ++ + EG+ +E LHRQVLPF+LRR K +VL DLPPKII + CNL+ Q RL++ + + A V ++ V A QT Q SR + L LQ +C HPALVL E K +++ ++ S KLM+L++LL D GIG P D SN I D H A LIF QHK+ LD+ E LLR V+ +R+DGSV R V +F+ DP++ LLLLTT+VG LGLNL A V+F+EHDWNP VDLQAMDRAHR+GQ++ VNVYRLI ++E+++L LQ KL +A V+ EN++ + GT +VL +
Sbjct: 1323 EVERFCGKSHLDPLHYVGNPRERQRLQTKLSKHN----------------------------LVIASYEVVRNDVEFFSKFDWNYCILDEGHMIRNGKSKLTLCIKSLRSNHRLILTGTPIQNSVLELWSLFDFLMPGFLGSEHEFNCRYGKPILASRDAKCSSKEQEEGVMAMEALHRQVLPFMLRRLKEDVLQDLPPKIIQDYYCNLSPLQVRLYEDFAKTKAKKEVDTSITHVSAEQT-------------------------------------------QGSRAKQTSHIFQALQYLQKVCNHPALVLTPCHPEYQQVINELAKDKSSLHDIQHSSKLMSLKQLLLDCGIGV----PTDNSNNI--------------------------DSVVGQHRA-----------------------------------------------------------------------------------------------------------------------------------------------LIFCQHKSMLDIVEHDLLRKHMKSVTFMRLDGSVVAANRHQIVSKFNNDPSIDLLLLTTKVGGLGLNLTGADTVIFIEHDWNPTVDLQAMDRAHRIGQKRVVNVYRLITRATLEEKILGLQQFKLNIANTVISTENSSLHSMGTNQVLDLF 1776
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Match: A0A7S4AAS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAS6_9STRA) HSP 1 Score: 259 bits (663), Expect = 4.090e-72 Identity = 197/634 (31.07%), Postives = 288/634 (45.43%), Query Frame = 1
Query: 187 DFANVIITSYSVLRSDAEILGEQAWLYLVLDEAHLLRNPNTNVAKAARALKSSHRVGLTGTPIQNSVLELWSLFEFLMPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVLRREKIEVLADLPPKIITEIMCNLTATQRRLHKIWERGGAGGNVLAAVAEVEAAQTAAERLRENAAAAAAKTTSAGTAPEPSAKDGAGPISDVGIATAAQRSRLSVGAQTLACLSRLQLLCVHPALVLAEESDKRRAASK-------NLHLSGKLMALRELLWDAGIGESHLSPYDPSNTISGHRFPRHGAEKTPSKIDAVDDESDDDDXXXXHEAXXXXXXXXXXXXXXXXXXXAKAIALEDDNLIMLDVPELADREVLDPGNCETANASSSSNSNTSLDQNKITSRDGREENAGGCRKSSMRKRGSTAAEAAENRGNKSKGKAGGAAAKGEPLSRSRPSGDSGRDTSTVTRMPGCKCLIFAQHKAALDVTESALLRPFFPDVSCLRVDGSVSQDERAAAVDRFSTDPAVGLLLLTTRVGHLGLNLHAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSIEQRVLRLQGHKLGVAAAVVGEENATAFARGTGEVL 2067
+ N+I+TSY LRS+ + L + W Y VLDE HLLRNP T AKA+R L++ H++ LTGTPIQNSV ++W+ F+FLMP +LG F ++ A+P+ + + G+++L+ LH+QVLPF+LRREK +VL +LPPK+IT I C +++ Q ++ + G ++A+ ++ T A PSA + T A +S L L+LLC HP LV KR A+ NL SGKL+AL+ELL DAG+ L+ D D +LI D E ++ D +K+ + D C SS K ++ E+R CLIF Q +LD+ E L++ P V LR+DG V +R VD+F+ D + LLLLTT++G LGLNL A V+FLEHDWNP DLQAMDRAHR+GQ++ V+VY+L+ +SIE++ ++L KL ++ A+V +N++ ++ GT +L
Sbjct: 123 ESCNLIVTSYERLRSEIDSLSKVNWTYCVLDEGHLLRNPKTATAKASRRLRARHKLILTGTPIQNSVDDIWATFDFLMPSFLGSASQFSKEFAKPIVKGQNLDAAPVDIATGMEKLKLLHQQVLPFILRREKEQVLTELPPKVITRIPCPMSSIQEDMYHQFCSDQTGKQSISALNKM------------------IDTKDQSVADSPSAFN-----------TNAFKSLLY-----------LRLLCTHPWLV----RKKRELANPQMQENIYNLEASGKLVALKELLRDAGLPFRELTAAD-----------------------------------------------------------------NDTSLIYCDKDEEQTSDI--------------------DDHDKVLAPD--------CHDSSENKLRQYQSDRQESR-----------------------------------------CLIFGQFMHSLDIVEELLIKRHMPSVKYLRLDGKVPVSQRMTVVDKFNQDESFKLLLLTTKIGGLGLNLTGADTVIFLEHDWNPHSDLQAMDRAHRIGQKRTVHVYQLVTMNSIEEKTMQLHERKLAMSKAIVNTDNSSMYSMGTDRLL 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2280.6084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2280.6084.1 >prot_H-paniculata_contig2280.6084.1 ID=prot_H-paniculata_contig2280.6084.1|Name=mRNA_H-paniculata_contig2280.6084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp MPGYLGDRRSFQRDVARPVRLALSSEGDGRATVEGLQELEHLHRQVLPFVback to top mRNA from alignment at H-paniculata_contig2280:353..11721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2280.6084.1 ID=mRNA_H-paniculata_contig2280.6084.1|Name=mRNA_H-paniculata_contig2280.6084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11369bp|location=Sequence derived from alignment at H-paniculata_contig2280:353..11721+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2280:353..11721+ >mRNA_H-paniculata_contig2280.6084.1 ID=mRNA_H-paniculata_contig2280.6084.1|Name=mRNA_H-paniculata_contig2280.6084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at H-paniculata_contig2280:353..11721+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |