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Homology
BLAST of mRNA_H-paniculata_contig2271.6049.1 vs. uniprot
Match: D7FWA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA3_ECTSI) HSP 1 Score: 307 bits (786), Expect = 1.450e-84 Identity = 371/1078 (34.42%), Postives = 473/1078 (43.88%), Query Frame = 2
Query: 539 LEEAARRSLLVRAQPHPSDP-------------ARFDLRRVFRAIGATGEEPEEVLTAARLRQALAEIFNHAVSRGGREARATIALPLDDDNAPAVADAADVAAGEVTARILRETEAIDRGAAIATATASIDYRWFEDWVFPARGVKELRSVLAELVEDGVALGLTVADLFTQVRVGRTAGGDSGIAHTLCEDDGPGESETIGKRQLQKGLSALSVHFTETEAETLVKAAGHSRCNVSGGGGGGNDGSHEVDRVSLEMFSALANCKGSTRQQRRPVVT--SAARA-----APCSAEVRIKRSSTVIDIVGDAPNAAIPEEY-GEVSPDSLAAATPSVSLPLSFELGEEATARATAGPESSSSSVAAHVEAFGRVAADVQAVLASAVSSTAVKTTTSXXXXXXXXXXXXXXXXXXXXXXASSGKN------SDYGGRRGDDGKVLERRHGGRVMVSPLSTGHGS------------VPETIEGRDTALLVPSSR-SSREENSVPFPLTRVTTPPFGSVRSTSAPLHPTRASRERLKAALETLDLKEHLKPTLGDTTTRGSTLDEGGQGDTAKGGQEEGVACASGNDSLRQPKGGKLLRSDDGS--------SGHGSSRGKEGRRLKIGAVA---------FGSD--GGEIPAATAPRSRGRAKVYSD--------DRVSGISLEAEH---------GEGLNYISMEAA-------------ETIGRLRARVTELELSEQLLRCEVEGARADLVHQEKRATAAXXXXXERTRNRERALQARMGARLRAAEAEVAATANAMAEHKRLAAAEAVAKEKSAAEYLRRRLKEKEAALETKLRRFSADRQRSKLVRSRGWT----PH----GAEDG--DGGGRV--------GVGAGARWHDDWREDCAERDGKRRVGGSGRKGSEEDVSMSHF--------KLRRDLDICRKKLAAARQE----KTFDGAQRGQRGAGRGTAAFTAVWQGQGAPLRMQRGVVSSKLVRGCREKQQXXXXXXXXXXXXXLKRRELRLEARLAQSDDARIEMEAEVGRLQAFIDEMRGLGPLVPMYTKAGGSAAAE 3415
+E+ AR S+L A P P A FDLR VF ++G VL A L+ AL + ++R ++A A A +D AA V AR++ +E +DYR FEDW+ P RG +E+R VL ELVE+G LGLT A+LF Q+ D G H E IG R+L+KGL++LSVH TETE ++ AG C+ GG N + ++LE FSAL RQ+ PV SAARA +P AE+ R T + AA E+ G V+PDSLA L + + A AG ++S+S AAHVEAFGRVAADVQAVLA+AVS + + XXX XXXXXXXXXXX S + + G + + R+ RV V+ S G T+ SSR S+ S PFP T TPPFG RS S PLHPTRASRERL+AALE LDLKE L+PT TT G+ D G T+ G + S L G R SG ++ +G A SD GG + ++ GR + + DR+SG A GE ++ + E A E IG LRA+V ELEL+E LLRCE++GAR+DLV + +RA R + RER LQ RMGARLRAAEAE AATA MA+ K RRLKE E LE K R + +R + R R + PH G +DG GG G+G+ + W +R +RR+ G G KLR +L CRKKL A E K A G++G GR A K R K K+RE RL AR+A+S+DARIE+EAE GRLQAF+DEMRGLGP + Y + G AE
Sbjct: 16 MEQTARTSILALAHAAPKRPPSAGNSASPSSATAGFDLRAVFNSLGGAPAGDTAVLRAGDLQAALVRLCQE-------DSRTSLATTA----AVPSAGVSDAAAARVAARVVGTSE-------------GVDYRRFEDWIMPPRGFEEVRRVLIELVEEGSFLGLTAAELFLQL--------DDGAQH-----------EGIGSRELKKGLASLSVHLTETEVAMVMSGAGS--CSTGGGIDERNQSGKDRLIMTLEEFSALVQNPLKQRQRAIPVTATGSAARALEANKSPQGAELSNARRHT-----NNTDGAAAAEDGDGCVTPDSLAPRMSLSELQVLDDGKGSGGGSAYAGGPATSNSTAAHVEAFGRVAADVQAVLATAVSGSGTGRSXXXXXGQDGCSXXXXXXXXXXXGSISKDRRPTVPSPNSSAGPAAMEACATDSRN--RVGVADRSPGEEEGKXXXXXXXXXXXXXXXXXXSTSQTPTSSRVSTAASRSAPFPRTGAITPPFGPARSPSEPLHPTRASRERLEAALEGLDLKERLRPT---TTVGGNNPDNGSDHPTSSLGARRRSSHRSAGARLPAEGAGGEARQASSQRRXXXXXXSGRRPGTSSSVAKVAVGTAASPATFLSRRLASDVVGGGVGSSNRRPVAGRRRTATGVDERGSRADRLSGSRSGAAGPEQRQQQLLGEVVDLTAAEGARKPEYDGGSEGAPEVIGGLRAKVAELELAEHLLRCELDGARSDLVSERRRAEKESRREAARAKERERVLQTRMGARLRAAEAEAAATAKRMADFKXXXXXXXXXXXXXXXXXXXRRLKEAEVVLEAKAARRISSSKRQQQQRQRAYLATGRPHRESRGGDDGTDSAGGSXXXXXXXXRGIGSSSGW--------GQRRARRRIVPPGDAGGGXXXXXXXXXXXXXXAAKLRDELASCRKKLDVATAEVSRLKKEVSAASGRKGGGRRGDCKGAEXXXXXXXXXXXXXXXXKKSARP--GKACLVCGERGGSSRERQKQRERRLAARMAESEDARIEVEAEAGRLQAFLDEMRGLGPPIVQYWRGGAEREAE 1028
BLAST of mRNA_H-paniculata_contig2271.6049.1 vs. uniprot
Match: A0A6H5L9S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9S9_9PHAE) HSP 1 Score: 254 bits (648), Expect = 1.170e-66 Identity = 277/828 (33.45%), Postives = 360/828 (43.48%), Query Frame = 2
Query: 479 DAIVAEKQMQENAGTGRIAQLEEAARRSLLVRAQPHPSDP-ARFDLRRVFRAIGATGEEPEEVLTAARLRQALAEIFNHAVSRGGREARATIALPLDDDNAPAVADAADVAAGEVTARILRETEAIDRGAAIATATASIDYRWFEDWVFPARGVKELRSVLAELVEDGVALGLTVADLFTQVRVGRTAGGDSGIAHTLCEDDGPGESETIGKRQLQKGLSALSVHFTETEAETLVKAAGHSRCNVSGGGGGGNDGSHEVDRVSLEMFSALANCKGSTRQQRRPVVTSAARAAPCSAEVRI----------KRSSTVIDIVGDAPNAAIPEEYGEVSPDSLAAATPSVSLPLSFELGE---EATARATAGPESSSSSVAAHVEAFGRVAADVQAVLASAVSSTAVKTTTSXXXXXXXXXXXXXXXXXXXXXXASSGKNSDYGGRRGDDGKVLERRHGGRVMVSPLSTGHGSV-----------------PETIEGR----------------DTALLVPSSR-SSREENSVPFPLTRVTTPPFGSVRSTSAPLHPTRASRERLKAALETLDLKEHLKPTLGDTTTRGSTLDEGGQGDTAKGGQEEGVACASGNDSL-RQPKGGKLLRSDD---------------------------------------------GSSGHGSSRGKEGRRLKIGAVAFGSDGGEIPAATAPRSRGRAKVYSDDRVSGISLEAEHGEGLNYISMEAAETIGRLRARVTELELSEQLLRCEVEGARADLVHQEKRATAAXXXXXERTRNRERALQARMGARLRAAEAEVAATANAMAEHKR 2680
DA E ++++ A T +A + A +R PS A FDLR VF ++G +L A L+ AL + SR + T ALP A D AA V AR++ +E +D+R FEDW+ P RG +E+R VL ELVE+G ALGLT A+LF Q+ D G H E IG R+L+KGL++LSVH TETE E ++ AG C+ GG N + ++L+ FSAL + Q +R + +A +A C+ E +R +T D AA + G V+PDSLA P +SL L + A AG ++S+S AAHVEAFGRVAADVQAVLA+AVS + + S G +S G+RG G + V S G ++ P EG+ + SSR S+ +S PFP TPPFG RS S PLHPTRASRERL+AALE LDLKE L+PT TT G+ D G T+ G + S L + GG+ ++ G G + R GRR +A G D SR A V + E + S A E IG LRA+V ELEL+E LLRCE++GARADLV + +RA R + RER LQARMGARLRAAEAE AATA MA+ KR
Sbjct: 32 DAEEDEDRLEQTARTSILALMYAAPKRLPSAGNSASPSSATAGFDLRAVFNSLGGAPAGDTALLRAGDLQAALVRLCREDSSR--TSSATTAALPS--------AGVLDGAAARVAARVVGTSE-------------GVDFRRFEDWIMPPRGFEEVRRVLIELVEEGSALGLTAAELFLQL--------DEGAQH-----------EGIGSRELKKGLASLSVHLTETEVEMVMSGAGS--CSTGGGIDERNQSGKDRLIMTLQEFSALVH--NPLEQPQRAIPVTATGSAACAFEANKSPQGAEPSNERRHTTNTDSA-----AAAEDGDGCVTPDSLA---PRMSLSELHALDDGKDSGGGSAYAGGPATSNSTAAHVEAFGRVAADVQAVLATAVSGSVTGRSGSGTV-------------------GQDGCSSSTDGKRGGQGGSNSKDRRPPVPSPNSSAGPAAMEACAADSRNRVGVADRNPGEEEGKRXXXXXXXXXXXXXXXSPSQTPTSSRVSTNASHSSPFPRAGAVTPPFGPARSPSEPLHPTRASRERLEAALEGLDLKERLRPT---TTVGGNNADNGSDDPTSSLGSRRRSSHRSAGARLPAEGTGGEARQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGGGVGSSNRRPVAGRRR----IATGVDEKGSRTDRLSTSRSGAAGPEQRHVDLTAAEGARNPEYDGGSEGAPEVIGGLRAKVAELELAEHLLRCELDGARADLVSERRRAEEESRREAARAKERERVLQARMGARLRAAEAEAAATAKQMADFKR 779
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-01_003930.1 |
| Exons | 7 |
| Model size | 3418 |
| Cds size | 3039 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2271.6049.1 >prot_H-paniculata_contig2271.6049.1 ID=prot_H-paniculata_contig2271.6049.1|Name=mRNA_H-paniculata_contig2271.6049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1013bp
MKRIQAKQFVVNANRGSPSQENDGLMGSLELPSDAIVAEKQMQENAGTGR
IAQLEEAARRSLLVRAQPHPSDPARFDLRRVFRAIGATGEEPEEVLTAAR
LRQALAEIFNHAVSRGGREARATIALPLDDDNAPAVADAADVAAGEVTAR
ILRETEAIDRGAAIATATASIDYRWFEDWVFPARGVKELRSVLAELVEDG
VALGLTVADLFTQVRVGRTAGGDSGIAHTLCEDDGPGESETIGKRQLQKG
LSALSVHFTETEAETLVKAAGHSRCNVSGGGGGGNDGSHEVDRVSLEMFS
ALANCKGSTRQQRRPVVTSAARAAPCSAEVRIKRSSTVIDIVGDAPNAAI
PEEYGEVSPDSLAAATPSVSLPLSFELGEEATARATAGPESSSSSVAAHV
EAFGRVAADVQAVLASAVSSTAVKTTTSNDNSSDTRRRSGDGNGRGESQS
ASSGKNSDYGGRRGDDGKVLERRHGGRVMVSPLSTGHGSVPETIEGRDTA
LLVPSSRSSREENSVPFPLTRVTTPPFGSVRSTSAPLHPTRASRERLKAA
LETLDLKEHLKPTLGDTTTRGSTLDEGGQGDTAKGGQEEGVACASGNDSL
RQPKGGKLLRSDDGSSGHGSSRGKEGRRLKIGAVAFGSDGGEIPAATAPR
SRGRAKVYSDDRVSGISLEAEHGEGLNYISMEAAETIGRLRARVTELELS
EQLLRCEVEGARADLVHQEKRATAAAAAAVERTRNRERALQARMGARLRA
AEAEVAATANAMAEHKRLAAAEAVAKEKSAAEYLRRRLKEKEAALETKLR
RFSADRQRSKLVRSRGWTPHGAEDGDGGGRVGVGAGARWHDDWREDCAER
DGKRRVGGSGRKGSEEDVSMSHFKLRRDLDICRKKLAAARQEKTFDGAQR
GQRGAGRGTAAFTAVWQGQGAPLRMQRGVVSSKLVRGCREKQQQQQQQQQ
QQQRERLKRRELRLEARLAQSDDARIEMEAEVGRLQAFIDEMRGLGPLVP
MYTKAGGSAAAE* back to topmRNA from alignment at H-paniculata_contig2271:1522..9964- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2271.6049.1 ID=mRNA_H-paniculata_contig2271.6049.1|Name=mRNA_H-paniculata_contig2271.6049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8443bp|location=Sequence derived from alignment at H-paniculata_contig2271:1522..9964- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATGTCCTTTTTGGATGTTCGTTGCGGGAGGGGTAGGAGGGTGTCTTGT
TGTGAATTTACTAGTATCAATGTGGTCAACGGGAACTGACATGTCCTACA
AATCTATGATGGCTGCCTCAGAGCTGCTGCAACCGTGTTTTCGGGGTCAT
TGAATTTGATTGTGTTGTTTGTCCTAATTTGTTTGAAGAAGCTCGATGAG
AAGCGTTATGAAGAGAAGGGTAATGGCGGCGATCTGATCCAGAGTGGTGT
ATGAGCGTTACTTCAAGGTCCTTCAATTCTCGCTAGTTGGCATTCTCCTA
GGCTACTGATACTGTGAATATCAAAACGCGATCCAACGACAACATACAAG
GACATACGGGGTATATTTATTTGTCGCTGATGAAACGTATCCAAGCGAAG
CAGTTCGTCGTCAACGCCAACCGTGGAAGTCCCTCCCAAGAGAACGATGG
TCTCATGGGTTCCCTCGAGCTTCCGAGTGACGCAATTGTTGCTGAAAAAC
AGGTAAGAGTGGGATACGTAGCGTTACAAGCAAGCCGAAAGATATTTGTC
TCCGGCTTGACCGTGGTGAAAGCTCATGGCGGAGGACGCATAGCATACCA
AATAATGATAGAATGCAGATGGTCCACAAGATACCAGTTTTGGTGACGAA
GGTCGTTGAACATGCAGATAATAGTGGGTATGTAAGCATATCTGAGATGG
AACACGAGGTGAACCTGTCTGAATAGCTTGTTCCAACCAAATCAAAAGAG
ATTGTAGCCGTAAACAATCCCGACGGTTGTACTGAACAACTGCTAGAGCC
ACGGTACTTGCTTGAATTAGCATGTACCTGCTGCGACACTCATTCTCAGT
ACCGTCTCGAGTTTGCCGCCAACTGAGTTGTCGTTGTTGAGCCGTCCCGA
GGGCTTTTCCCCCGTGATCCCATGATATCCTTCTTTCCCGTCCCTCGTCA
CGCATGATACCCATGGAGAATGAGAAAATGCATCCGCATTTTTCCTGTTG
GTAGACTTTTTTTGAAGGGGAAACATTTTCTTTCGGTCAATCATTTCGCT
CCTTTGAAAAAATGTTGACCTATAGGGAAACTGCGGATACCTTTTCCCTT
TTTTTCTCCTCCCACCCCGGTCGAACCAGATGCAGGAGAACGCTGGTACT
GGAAGAATTGCCCAGCTGGAGGAAGCCGCGAGGCGCTCGCTCCTCGTTCG
GGCACAGCCACATCCCTCTGACCCCGCTCGCTTCGACCTTCGGCGGGTAT
TTCGCGCGATAGGCGCGACGGGAGAAGAACCCGAAGAAGTGCTTACCGCC
GCCCGCTTGCGGCAAGCCTTGGCAGAAATATTTAACCATGCTGTTAGTCG
TGGTGGCCGCGAAGCACGAGCGACCATTGCTCTCCCGTTGGATGACGACA
ACGCGCCAGCTGTGGCCGACGCCGCCGACGTTGCGGCGGGAGAGGTGACC
GCCCGGATCCTACGCGAAACAGAAGCCATCGACCGAGGTGCAGCAATTGC
AACGGCGACGGCGAGCATCGACTATCGATGGTTTGAAGACTGGGTGTTTC
CCGCGCGAGGCGTGAAGGAGCTCCGTAGCGTTCTAGCAGAGCTCGTGGAG
GATGGAGTTGCTCTCGGACTGACGGTGGCGGACTTATTTACGCAGGTTCG
GGTCGGTAGAACTGCCGGCGGTGACAGTGGGATAGCTCATACTCTCTGTG
AAGACGACGGACCGGGAGAAAGCGAGACAATCGGGAAGAGACAGCTGCAG
AAGGGCCTCAGTGCTCTCAGTGTTCACTTTACCGAGACCGAAGCAGAAAC
GCTGGTTAAGGCTGCTGGACATAGTAGATGTAACGTAAGCGGCGGCGGTG
GTGGCGGTAACGATGGTAGCCATGAGGTTGACCGAGTGTCCTTGGAGATG
TTTTCGGCTCTTGCGAACTGCAAGGGTTCCACGAGGCAACAACGGCGGCC
AGTAGTAACGTCTGCAGCGAGGGCAGCACCGTGCTCGGCAGAAGTTAGGA
TCAAAAGAAGCTCGACTGTAATAGATATAGTTGGTGATGCGCCAAACGCT
GCCATTCCTGAAGAGTATGGGGAAGTGAGCCCCGACAGCCTAGCGGCGGC
AACGCCGAGCGTTAGCCTGCCCTTGTCTTTCGAATTAGGAGAAGAGGCGA
CCGCTAGGGCCACCGCCGGTCCCGAGAGTAGCTCTAGCTCGGTGGCAGCG
CACGTCGAAGCGTTCGGTCGCGTAGCAGCCGACGTGCAAGCTGTGCTTGC
CTCTGCCGTGTCCTCTACCGCGGTGAAAACTACCACCAGCAATGACAACA
GCAGTGACACGAGACGACGAAGTGGTGATGGCAATGGTCGTGGGGAAAGT
CAAAGTGCTTCGAGTGGAAAAAACAGCGACTATGGTGGGAGACGAGGAGA
CGACGGAAAAGTGCTGGAAAGAAGGCACGGTGGCCGCGTGATGGTGTCAC
CATTATCGACGGGACATGGTTCGGTCCCGGAAACAATAGAAGGTAGGGAT
ACCGCCCTGCTTGTTCCGTCCTCGCGGTCATCACGCGAGGAAAATTCGGT
ACCGTTTCCACTCACGCGCGTGACTACGCCCCCGTTTGGATCCGTACGGT
CGACCTCTGCGCCCCTCCACCCCACCCGCGCCTCTCGAGAACGCCTCAAA
GCAGCCTTGGAAACCCTAGATCTGAAGGAGCACTTGAAACCGACGCTTGG
AGACACAACCACACGCGGTAGCACTCTGGATGAAGGGGGGCAAGGGGATA
CGGCAAAGGGTGGACAAGAGGAGGGTGTCGCGTGCGCGAGCGGCAATGAT
AGTCTCCGTCAGCCGAAAGGTGGGAAATTGCTGAGGAGCGATGATGGCAG
CAGCGGCCATGGCAGTAGTAGGGGGAAAGAGGGTAGGAGACTTAAAATCG
GAGCTGTGGCCTTTGGCAGCGACGGGGGCGAGATTCCGGCGGCAACAGCC
CCTCGATCACGAGGCCGTGCGAAGGTGTATAGTGACGATAGAGTCAGTGG
AATCTCCTTGGAAGCAGAGCATGGCGAGGGTCTTAACTATATATCCATGG
AGGCTGCCGAAACAATAGGGCGTCTTAGGGCGAGAGTTACCGAGCTTGAG
CTGTCTGAGCAGGTGTGTGAACATCGTGAACTCGTTTCATTTAGTCAGAG
CGTTTGAAGTACTGGTGCGAGAATGCGTCAGAGTACTCTAAAACACTAAG
AGGGCAAAGGGGATGTGCGACGGTATGCTTAAAAACTGAACGCGCGAGCT
TGGTGCTTTGTACTCTCAGGGAACAGTTTCTGTATCGAACTCCCACGGTT
GTATAGCGTCGCGAGCTCTCGCTTGGGTACAACTGGTCCGTTCATTGTTA
CTTTCCCACCTGTCCATATCTCATAAATCCGGGCTGCATCCCAGTCAACC
GCATAAATCAAGCACCCCCCCCCTTGTAAGCCACTAACTACGCCTTCCTG
GATCAACCTTTCGTTTTGAAGCGCTCGTACAAACATAAACGTCATTCTTA
ATTGCTAGCATGTGCGCACGGTACCCCTCGCAAACACACACTGCTATGTG
CTTTTTTTGCTGCTCAGCTGCTCCGGTGCGAAGTGGAGGGAGCCCGCGCC
GACCTCGTGCACCAAGAGAAGCGAGCAACGGCCGCCGCGGCCGCCGCGGT
AGAGCGAACCAGAAATCGCGAGCGAGCGCTTCAAGCACGGATGGGAGCGC
GCCTTCGGGCAGCCGAGGCGGAGGTGGCAGCTACCGCTAACGCAATGGCC
GAGCACAAGAGGTGAAGACTTGAAGATTTTCTGCTACTGCTGTTACTGGA
CGCGTGTTGATCACTCGGGACGGATTCAGTACAATGTCGTTCGCAGAAAA
CGAAAACGTTCGATTGGCTAGCCATCTACAATACCTACCTGATTGTTGCG
TCGGGAATACAGCGTCAAAGGTCTTGAAGATAGCAAATATATACGTGGTA
GTCCTGGATTTAATATAGTAGATGGACGAGATCAGCTATCGTCGAATATC
TCCGAATCATAAAGCCAAGTGGTTTTTATTCCCTCTCCCATGCCTAGCAT
GTGAACGGGGACTAAAAAATCACTAGTTTACCATAATAGACGCTGCGCTA
AAGCTGAGGATCCTTTTATGAATTGAATAGAAGTATGGATAACTTTATGT
GAAGCCATAATTACGGGTTAAATAACCTCAGGATGAAAGTACCATGTACA
ATAATAGTGTTGTGGGCTTACGATACATTCGTCTCAAAAATATTGTTTTG
AAAGGGGCTAGGGCTTGTCATGGATGACAATTATCAACTGATAATGTCTA
ATTACGCCGGTAGATGTGACCGTTGGCGTGCTGTTTCCAGTCCGAATTGT
GAAGCTAGTCGAGGTAAAGTACTTGGTCATGAGTTGGGTGAATTGATCTG
ACCTATGTCATGCCATACCATTATTGTACTGCCGACTGTGTTTGCTCGTT
AACATATATTGCAACTCCAAAAACAAAAACAAATCCGCTTGTGTCCACCT
GTGGGTTTCTCGTAGTTGTTGTGGATGAGCTATACTTGTAGTGACAAAAG
AGTAAGCACAATAAAGTGGCTAATCCTTAGACATACGCAGTCCGCCGGAC
ACGAGTCCATGGATCATGCTCTGTGAGCTAGTGAGGGAGTGTCTGAACAA
GATTTTGTCCCCTTATTTTGCCGATCGTTTTGTCATCTCTTCCAGGCTGT
TGTAGGCTATTCCCGTCGATAGTATGCCAGGCACATCAACGGCCTAATCC
GTAACATGTTTGTGTGTATCCACACATAATCCATTATATGGTTAGATTCC
GCCATAATTTTGAATGTTTCGAAGCTGGAGCATCCTCATGCCCTCCATCC
CGAGAGCGTTTTTTGTGGTAATCAATTTGATTTGTAGTGTTCAGTGTCCA
GTATCCAGTATCCACGGTAGGGGGGGTGTTCACAAGGGGAGTACTGGTGG
TCAATAGGTTGTTTTGCCTCTTCCGCGCCTCTCCTCCCGGGTGCATCCCT
CCACCCCCTCGCATCCTTTCCTGCCAGATTGGCCGCCGCAGAGGCAGTCG
CGAAAGAAAAGTCAGCGGCGGAATACCTTCGCCGCCGGCTGAAAGAGAAA
GAGGCAGCCCTAGAGACCAAATTGCGCAGGTTTTCGGCAGACAGGCAGAG
GAGCAAGTTGGTTCGGTCGAGAGGATGGACACCTCACGGAGCAGAAGACG
GCGATGGGGGCGGCCGGGTAGGTGTTGGCGCTGGGGCGAGGTGGCATGAC
GACTGGCGTGAAGATTGTGCAGAACGAGATGGAAAGAGAAGGGTCGGAGG
GTCGGGCCGAAAGGGTAGTGAAGAGGACGTGAGTATGTCGCATTTTGTTT
AAGGAGGGGGAGGGGGGGGGGGCAAGGTGGGAATTTCGAGATTTTTTGTG
TTGGGTGGTGCTCTGGGTTTTGATACATATACTCTTGTTTCTGTAAAATA
GTAGAAATCTATGCTATTGTCATGTTGACGATTTGTACAGCTTGGCGGAC
GTTTTTGCGGTTTTATCTGCACTTGAGATGTTCAGTGACCCACAGTTAGG
GGTGCCTAACCCCGATTTGAGGCCCACTTTTGGTGACAACGACCACACAT
TAAAGCCCCGATTAAAGAAAAAATATATGTTCATCCCCTCACAGATAATG
CCACCTACATCCCGCAAAGTACTTGTATGCAGTATCGGGTTTCCACGCAC
TTGTAACCTGAATTACTCGATACAGGTTAGGAACTGGCTCGTGAGACTCA
ACACACACTTGAGTATGTGCCTTATCTAGGGCTTGATCTTCTTGGACTTT
TTAATCCGCGTTATGAGAATCCCGAACGCCCCAATAAACAGTGCTTTTGC
TGCTACTTTTTCTGTGAAGATATTTTTTTCTTCATGACTTCAACGAGACA
TAAGATAAACCCCTAACTGTGGTTTTCGCGCATACGATAAAAAAAACTAC
ACCCCAATCGCCGACCTTGCTGAGGAGTATATTTATTCACAAGATAGCCT
ATCAACACAAACAAGTACCCCAAACTACTCGAATTTAGAGTGTGGGAGAA
GGCATCCTTTTCGAACGTAACTATTCTTCACACATTTGGTCGTTAGGGAA
GGATCGGGTGGTCGTAGGGGCATAATTCGCGTTGCTTATTGCAATGGTTG
TAGCTCGTTGTTGTAACCAGCATTCTCAGGGTCCCAAAGCATTCGAAATT
TAGCTTGCTCGGCCTTTTTACCGTCTAGCTGTGGGCTGCACCAGTACATG
ATCTTCGACGCCAGCTCGTTGGCAAACTTGGTGTGCAGCCAGCCGAATAG
ATAGATTATATATCATGACGTACGATTAATACCAATTGCTCCTGAAGGGC
GTACCAAGCAGGTTTTTTGGCGCCCATTCTCCTACCAGCCAGGCCACAGT
ATCCCAACGTTCTTCGAGAAGCCTCGCGCCGTGCCATATTACCATCCAGT
GCGTTTCGGCGTGCCGCACAAACGTTTCCTGCCACCTTGCACCGACATTT
GCGAAAACTAACCCCTTCATCTGAGATCATCTGATATTCGAGGAGTCGCT
TCTCCTAGTATTGTACCAAATGGAACCAAGCAACGCTACGAAATGTTGAT
GCGGCCACTCATGCCACGATCCCGTGCCAAGGGTGCCCATGAAGCACTCA
CTCTCCATCCCTGACGTCATGTCAATCTGGAGGGCATGCAGGAGGCAACC
AATGCATGTTGCTTAGATGGTGGGAGGTGCGGTCGCTGGTGCTGCTTTTG
CTGCTGTATCCTGGCATGTCGTAGCAGGGGTCGGGAGCGGCTGCTCTTGC
CTGTCGGTCGGCCATTTTGTCAGTGCCGTCCGGTTACTGGATGCGGTCTA
CTCGGGCTCGTGTGGGATGCTGTGCGTGCTGTGTGTGCAGATGCTACTGC
TGTTGCACTCAGAGGGAGGCAGTGAGAGGCAGCTCTCGCATGTGGAGCAG
TCTCTCTGTTCTGTCTGTAGCTCCTTAGCCTTTCTGATGACTTCTTCGGG
GTTGTTCGTGTTTTCCTATTTTTGGGATATCCTGCCTCTTTCTGGATTAT
TCATTTTTTTGTTTATTATGATTATTTTTATTATTATCAGGTGACGTTGG
GTCTCTCGATGGTTGTGTGTGTGTGTTCGTTTTCGGTGATGTCAACTTCT
TTTTTTTCTTGGCCCAAACCCTCTAAAAAGCCGGCAATAAATACGTGGTC
GTCGCGAAAAATTACGCGGTCTTTGCGAACACAATTACCGCACTATTGAG
GACTTAGGCCCACCCCTAACAGTACTAACAGGATAAAATATACACGATGA
TCCATCTCAGAATATTCTACCTTTATCCGTTAGATCTATCGCTTTGTTCG
ACTCCCGTTGGTCATAAAAACGTTATGTACGTTCTAATGAATGTATTACC
GGTATACTCGGAGTACGTTGCCACCCGTGGTCTCCGAGTTCTCACAGAAA
CAAAACACGTTCGTGTTCCGCCACTGCTCTGGCTCTTCTTGTTCTCGCTA
TCTCTTTCTCTTTTGGCGCGTGATTTTTTTTCTTGCCGCGACACAGAAGC
TCCGACGAGACTTGGACATTTGCCGCAAGAAACTTGCAGCGGCTAGTGCA
GAGACGATTAAGTTCCGACGAAACGCCGCCGCCCGCGGCGCCCATTCCAG
GACGACCAAGGACAAGAAAAAACATTTGATGGTGCGCAACGAGGACAAAG
AGGAGCAGGAAGAGGAACCGCGGCGTTCACTGCCGTCTGGCAAGGACAAG
GCGCCCCCTTGCGGATGCAGAGGGGCGTGGTTAGCTCCAAGCTGGTGCGT
GGGTGGTCGATCGCTTTGTCTTTTGACCTATGCTGGTGCCAGGGCAGTCG
TTGAGGCGGCCTAGGGGGGGTGGCAGGGAAGAGATTTGTATGTGTACTTT
TGCGTTGTTTCCGGCAAGATGTGACGAGAGCAACTGGCTGTGGGACATCG
ACAACCGTAAGAATAGAGATATAAAACGGCATGTAGAGAAAGTAAGGTAG
ATATAGGGTCATGCTTAAGTGAGGACAAATGCAGTATAAGTACGTACGAA
GCAAATCTCTTTGGTTATCCTCGACACACCCCACCTCCGTCACCCTCTGT
GCCCAAACGGGACTTGATTGAGCAATTATCAATGTGATGAAAACGTAAGA
GTACACCTCTGTTTATTCATGTTTATATTCCACCCAACAGGGGGGGTCCA
TTGACGCCCTCAGCAAGCCGAGAGAAGCAGCAGCAGCAGCAGCAGCAACA
GCAGCAGCAGCAGCGAGAAAGGCTAAAGCGCAGAGAGCTTCGACTGGAAG
CTCGGCTGGCTCAAAGCGATGATGCTCGTATAGAGATGGAGGCGGAAGTA
GGCAGGCTGCAGGCCTTTATCGACGAGATGAGGGGTCTAGGACCCCTAGT
GCCAATGTATACCAAGGCCGGGGGAAGCGCTGCAGCCGAGTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2271:1522..9964- >mRNA_H-paniculata_contig2271.6049.1 ID=mRNA_H-paniculata_contig2271.6049.1|Name=mRNA_H-paniculata_contig2271.6049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6078bp|location=Sequence derived from alignment at H-paniculata_contig2271:1522..9964- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAACGTATCCAAGCGAAGCAGTTCGTCGTCAACGCCAACCGTGGAAG
TCCCTCCCAAGAGAACGATGGTCTCATGGGTTCCCTCGAGCTTCCGAGTG
ACGCAATTGTTGCTGAAAAACAGATGAAACGTATCCAAGCGAAGCAGTTC
GTCGTCAACGCCAACCGTGGAAGTCCCTCCCAAGAGAACGATGGTCTCAT
GGGTTCCCTCGAGCTTCCGAGTGACGCAATTGTTGCTGAAAAACAGATGC
AGGAGAACGCTGGTACTGGAAGAATTGCCCAGCTGGAGGAAGCCGCGAGG
CGCTCGCTCCTCGTTCGGGCACAGCCACATCCCTCTGACCCCGCTCGCTT
CGACCTTCGGCGGGTATTTCGCGCGATAGGCGCGACGGGAGAAGAACCCG
AAGAAGTGCTTACCGCCGCCCGCTTGCGGCAAGCCTTGGCAGAAATATTT
AACCATGCTGTTAGTCGTGGTGGCCGCGAAGCACGAGCGACCATTGCTCT
CCCGTTGGATGACGACAACGCGCCAGCTGTGGCCGACGCCGCCGACGTTG
CGGCGGGAGAGGTGACCGCCCGGATCCTACGCGAAACAGAAGCCATCGAC
CGAGGTGCAGCAATTGCAACGGCGACGGCGAGCATCGACTATCGATGGTT
TGAAGACTGGGTGTTTCCCGCGCGAGGCGTGAAGGAGCTCCGTAGCGTTC
TAGCAGAGCTCGTGGAGGATGGAGTTGCTCTCGGACTGACGGTGGCGGAC
TTATTTACGCAGGTTCGGGTCGGTAGAACTGCCGGCGGTGACAGTGGGAT
AGCTCATACTCTCTGTGAAGACGACGGACCGGGAGAAAGCGAGACAATCG
GGAAGAGACAGCTGCAGAAGGGCCTCAGTGCTCTCAGTGTTCACTTTACC
GAGACCGAAGCAGAAACGCTGGTTAAGGCTGCTGGACATAGTAGATGTAA
CGTAAGCGGCGGCGGTGGTGGCGGTAACGATGGTAGCCATGAGGTTGACC
GAGTGTCCTTGGAGATGTTTTCGGCTCTTGCGAACTGCAAGGGTTCCACG
AGGCAACAACGGCGGCCAGTAGTAACGTCTGCAGCGAGGGCAGCACCGTG
CTCGGCAGAAGTTAGGATCAAAAGAAGCTCGACTGTAATAGATATAGTTG
GTGATGCGCCAAACGCTGCCATTCCTGAAGAGTATGGGGAAGTGAGCCCC
GACAGCCTAGCGGCGGCAACGCCGAGCGTTAGCCTGCCCTTGTCTTTCGA
ATTAGGAGAAGAGGCGACCGCTAGGGCCACCGCCGGTCCCGAGAGTAGCT
CTAGCTCGGTGGCAGCGCACGTCGAAGCGTTCGGTCGCGTAGCAGCCGAC
GTGCAAGCTGTGCTTGCCTCTGCCGTGTCCTCTACCGCGGTGAAAACTAC
CACCAGCAATGACAACAGCAGTGACACGAGACGACGAAGTGGTGATGGCA
ATGGTCGTGGGGAAAGTCAAAGTGCTTCGAGTGGAAAAAACAGCGACTAT
GGTGGGAGACGAGGAGACGACGGAAAAGTGCTGGAAAGAAGGCACGGTGG
CCGCGTGATGGTGTCACCATTATCGACGGGACATGGTTCGGTCCCGGAAA
CAATAGAAGGTAGGGATACCGCCCTGCTTGTTCCGTCCTCGCGGTCATCA
CGCGAGGAAAATTCGGTACCGTTTCCACTCACGCGCGTGACTACGCCCCC
GTTTGGATCCGTACGGTCGACCTCTGCGCCCCTCCACCCCACCCGCGCCT
CTCGAGAACGCCTCAAAGCAGCCTTGGAAACCCTAGATCTGAAGGAGCAC
TTGAAACCGACGCTTGGAGACACAACCACACGCGGTAGCACTCTGGATGA
AGGGGGGCAAGGGGATACGGCAAAGGGTGGACAAGAGGAGGGTGTCGCGT
GCGCGAGCGGCAATGATAGTCTCCGTCAGCCGAAAGGTGGGAAATTGCTG
AGGAGCGATGATGGCAGCAGCGGCCATGGCAGTAGTAGGGGGAAAGAGGG
TAGGAGACTTAAAATCGGAGCTGTGGCCTTTGGCAGCGACGGGGGCGAGA
TTCCGGCGGCAACAGCCCCTCGATCACGAGGCCGTGCGAAGGTGTATAGT
GACGATAGAGTCAGTGGAATCTCCTTGGAAGCAGAGCATGGCGAGGGTCT
TAACTATATATCCATGGAGGCTGCCGAAACAATAGGGCGTCTTAGGGCGA
GAGTTACCGAGCTTGAGCTGTCTGAGCAGATGCAGGAGAACGCTGGTACT
GGAAGAATTGCCCAGCTGGAGGAAGCCGCGAGGCGCTCGCTCCTCGTTCG
GGCACAGCCACATCCCTCTGACCCCGCTCGCTTCGACCTTCGGCGGGTAT
TTCGCGCGATAGGCGCGACGGGAGAAGAACCCGAAGAAGTGCTTACCGCC
GCCCGCTTGCGGCAAGCCTTGGCAGAAATATTTAACCATGCTGTTAGTCG
TGGTGGCCGCGAAGCACGAGCGACCATTGCTCTCCCGTTGGATGACGACA
ACGCGCCAGCTGTGGCCGACGCCGCCGACGTTGCGGCGGGAGAGGTGACC
GCCCGGATCCTACGCGAAACAGAAGCCATCGACCGAGGTGCAGCAATTGC
AACGGCGACGGCGAGCATCGACTATCGATGGTTTGAAGACTGGGTGTTTC
CCGCGCGAGGCGTGAAGGAGCTCCGTAGCGTTCTAGCAGAGCTCGTGGAG
GATGGAGTTGCTCTCGGACTGACGGTGGCGGACTTATTTACGCAGGTTCG
GGTCGGTAGAACTGCCGGCGGTGACAGTGGGATAGCTCATACTCTCTGTG
AAGACGACGGACCGGGAGAAAGCGAGACAATCGGGAAGAGACAGCTGCAG
AAGGGCCTCAGTGCTCTCAGTGTTCACTTTACCGAGACCGAAGCAGAAAC
GCTGGTTAAGGCTGCTGGACATAGTAGATGTAACGTAAGCGGCGGCGGTG
GTGGCGGTAACGATGGTAGCCATGAGGTTGACCGAGTGTCCTTGGAGATG
TTTTCGGCTCTTGCGAACTGCAAGGGTTCCACGAGGCAACAACGGCGGCC
AGTAGTAACGTCTGCAGCGAGGGCAGCACCGTGCTCGGCAGAAGTTAGGA
TCAAAAGAAGCTCGACTGTAATAGATATAGTTGGTGATGCGCCAAACGCT
GCCATTCCTGAAGAGTATGGGGAAGTGAGCCCCGACAGCCTAGCGGCGGC
AACGCCGAGCGTTAGCCTGCCCTTGTCTTTCGAATTAGGAGAAGAGGCGA
CCGCTAGGGCCACCGCCGGTCCCGAGAGTAGCTCTAGCTCGGTGGCAGCG
CACGTCGAAGCGTTCGGTCGCGTAGCAGCCGACGTGCAAGCTGTGCTTGC
CTCTGCCGTGTCCTCTACCGCGGTGAAAACTACCACCAGCAATGACAACA
GCAGTGACACGAGACGACGAAGTGGTGATGGCAATGGTCGTGGGGAAAGT
CAAAGTGCTTCGAGTGGAAAAAACAGCGACTATGGTGGGAGACGAGGAGA
CGACGGAAAAGTGCTGGAAAGAAGGCACGGTGGCCGCGTGATGGTGTCAC
CATTATCGACGGGACATGGTTCGGTCCCGGAAACAATAGAAGGTAGGGAT
ACCGCCCTGCTTGTTCCGTCCTCGCGGTCATCACGCGAGGAAAATTCGGT
ACCGTTTCCACTCACGCGCGTGACTACGCCCCCGTTTGGATCCGTACGGT
CGACCTCTGCGCCCCTCCACCCCACCCGCGCCTCTCGAGAACGCCTCAAA
GCAGCCTTGGAAACCCTAGATCTGAAGGAGCACTTGAAACCGACGCTTGG
AGACACAACCACACGCGGTAGCACTCTGGATGAAGGGGGGCAAGGGGATA
CGGCAAAGGGTGGACAAGAGGAGGGTGTCGCGTGCGCGAGCGGCAATGAT
AGTCTCCGTCAGCCGAAAGGTGGGAAATTGCTGAGGAGCGATGATGGCAG
CAGCGGCCATGGCAGTAGTAGGGGGAAAGAGGGTAGGAGACTTAAAATCG
GAGCTGTGGCCTTTGGCAGCGACGGGGGCGAGATTCCGGCGGCAACAGCC
CCTCGATCACGAGGCCGTGCGAAGGTGTATAGTGACGATAGAGTCAGTGG
AATCTCCTTGGAAGCAGAGCATGGCGAGGGTCTTAACTATATATCCATGG
AGGCTGCCGAAACAATAGGGCGTCTTAGGGCGAGAGTTACCGAGCTTGAG
CTGTCTGAGCAGCTGCTCCGGTGCGAAGTGGAGGGAGCCCGCGCCGACCT
CGTGCACCAAGAGAAGCGAGCAACGGCCGCCGCGGCCGCCGCGGTAGAGC
GAACCAGAAATCGCGAGCGAGCGCTTCAAGCACGGATGGGAGCGCGCCTT
CGGGCAGCCGAGGCGGAGGTGGCAGCTACCGCTAACGCAATGGCCGAGCA
CAAGAGCTGCTCCGGTGCGAAGTGGAGGGAGCCCGCGCCGACCTCGTGCA
CCAAGAGAAGCGAGCAACGGCCGCCGCGGCCGCCGCGGTAGAGCGAACCA
GAAATCGCGAGCGAGCGCTTCAAGCACGGATGGGAGCGCGCCTTCGGGCA
GCCGAGGCGGAGGTGGCAGCTACCGCTAACGCAATGGCCGAGCACAAGAG
ATTGGCCGCCGCAGAGGCAGTCGCGAAAGAAAAGTCAGCGGCGGAATACC
TTCGCCGCCGGCTGAAAGAGAAAGAGGCAGCCCTAGAGACCAAATTGCGC
AGGTTTTCGGCAGACAGGCAGAGGAGCAAGTTGGTTCGGTCGAGAGGATG
GACACCTCACGGAGCAGAAGACGGCGATGGGGGCGGCCGGGTAGGTGTTG
GCGCTGGGGCGAGGTGGCATGACGACTGGCGTGAAGATTGTGCAGAACGA
GATGGAAAGAGAAGGGTCGGAGGGTCGGGCCGAAAGGGTAGTGAAGAGGA
CGTGAGTATGTCGCATTTTATTGGCCGCCGCAGAGGCAGTCGCGAAAGAA
AAGTCAGCGGCGGAATACCTTCGCCGCCGGCTGAAAGAGAAAGAGGCAGC
CCTAGAGACCAAATTGCGCAGGTTTTCGGCAGACAGGCAGAGGAGCAAGT
TGGTTCGGTCGAGAGGATGGACACCTCACGGAGCAGAAGACGGCGATGGG
GGCGGCCGGGTAGGTGTTGGCGCTGGGGCGAGGTGGCATGACGACTGGCG
TGAAGATTGTGCAGAACGAGATGGAAAGAGAAGGGTCGGAGGGTCGGGCC
GAAAGGGTAGTGAAGAGGACGTGAGTATGTCGCATTTTAAGCTCCGACGA
GACTTGGACATTTGCCGCAAGAAACTTGCAGCGGCTAAAGCTCCGACGAG
ACTTGGACATTTGCCGCAAGAAACTTGCAGCGGCTAGACAAGAAAAAACA
TTTGATGGTGCGCAACGAGGACAAAGAGGAGCAGGAAGAGGAACCGCGGC
GTTCACTGCCGTCTGGCAAGGACAAGGCGCCCCCTTGCGGATGCAGAGGG
GCGTGGTTAGCTCCAAGCTGGTGCGTGGGTGGACAAGAAAAAACATTTGA
TGGTGCGCAACGAGGACAAAGAGGAGCAGGAAGAGGAACCGCGGCGTTCA
CTGCCGTCTGGCAAGGACAAGGCGCCCCCTTGCGGATGCAGAGGGGCGTG
GTTAGCTCCAAGCTGGTGCGTGGGTGCCGAGAGAAGCAGCAGCAGCAGCA
GCAGCAACAGCAGCAGCAGCAGCGAGAAAGGCTAAAGCGCAGAGAGCTTC
GACTGGAAGCTCGGCTGGCTCAAAGCGATGATGCTCGTATAGAGATGGAG
GCGGAAGTAGGCAGGCTGCAGGCCTTTATCGACGAGATGAGGGGTCTAGG
ACCCCTAGTGCCAATGTATACCAAGGCCGGGGGAAGCGCTGCAGCCGAGT
AGCCGAGAGAAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCG
AGAAAGGCTAAAGCGCAGAGAGCTTCGACTGGAAGCTCGGCTGGCTCAAA
GCGATGATGCTCGTATAGAGATGGAGGCGGAAGTAGGCAGGCTGCAGGCC
TTTATCGACGAGATGAGGGGTCTAGGACCCCTAGTGCCAATGTATACCAA
GGCCGGGGGAAGCGCTGCAGCCGAGTAG back to top
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