mRNA_H-paniculata_contig227.6043.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A6H5JEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG7_9PHAE) HSP 1 Score: 454 bits (1167), Expect = 2.680e-124 Identity = 991/2938 (33.73%), Postives = 1208/2938 (41.12%), Query Frame = 3
Query: 255 GAGSRRSFASKNLNALTKAPAVQSRGADRA-DVVRPAYGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGANKHPAXXXXXXXXXXXXXXXXXXXXXSVPAS-ARPERYVPP----NKSAFLRDRPGGVAADARGYPPQRAP--------------------------------------------------SVRATYGGQDGRGYGVQXXXXXXXXXXXXXXXRPGLGPAGGNAGQGHVLTDSDFPLEMGG-TSKAEKVSQLRPRGLSFMPFLCGKGGMGPDSSGERTEERNETSRTA----RGAQAGPASKSPSHYPVXXXXXXXXXXXXXXXEPPARDHPHPSPLGGARSGPVGDGRDFYGPPSISSRMGDARSSSFGPR-SGLANASNSYAGGGGVSNGSMXXXXXXXXXXXXXXXXYGGHHSHHNGDFRGNGGNAGLGGGRKPGGWDGGXXXVRGRGWERDRVGPS---RERELDWEHRRKWNPPDRIDGRDRDRGPDIRDXXXXXDGGRNWERARERDGGGI-QFSPRPTSLSASLSGDRPYSSANRASALRGASDGHGHDASRPSPIASPAAGPMGAP---------------SAVSVPAASTPAAPTPPPRGATDEERRKVAERVAEDAMAVAERERRLAERSDEVEKSAALRSRMELERLRAEKEDNERKAKADADRRQHTPRHPEASQSSQAETSASRTAATDRNASTNSWSTATQSHEGGEQEGAGGRGYEPDGYGRDDPYRRQEDVERERAAQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPK--------VTALLSRGQEEVVEASTGNRFIQARQIPPASPAIVGKTAAADAQGARRQQXXXXXXPGTSAAQESPRALKAKDAHRKPR-AEPSQLVLAERSSKPESETSVQWLTLRREGSESGGRGAQSEADKKAAEKDKKATPSAWAQPACSNQPSNPGRGGGGGTSASNGPLLLDRPKDP----RAHDRTT-GQDAAAVANLPLRSPRILRAGESGQHQHPPSPFAKDCGRTFSSLFVPPGGEQREITEGGGAGSGTIGVGENTNSANDSSNDNLAVGESRGGAGFQGV--RGGGVELG----RDWAEAGRGPLP---REQKRIFDHKTGKMRDVEDSDKSRPMNDRPPRPLAQDTRIDSHVSHQXXXXXXXHGLPQPFQTD---QADPLTDHAPPSPRP-------GPPSEASTRQGPPVPTEAAPVSNADVPDRRGDRREPHTGVSRRFDPLK----AHSRNHSHDGGSQGRGWEERREWGGXXXXXXXXXXX--WDERRGDGRERGWGRXXXXXXXXXXXXXVGRNESSGRDM---------DKTWERGVRKGA-QEDGRGDIVRGK-WDGAQ--APSMRRRVSPLLESDPPGSPAETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIVTAVQATTSDAHPKTATPSPVKKINTWEGRRGAPLTSSSSSPSREAPTQSLGQQAGGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGVSGVEEENREAIRARDERERDLAVRQRRSVDLASGKEVEVQRSSTRQHHGQQQQRKKEADGDVEKTRRAEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRDRPPRTNGALYRRATI-------AGTAEFV---NADVPEGWTDPLQDHWDVITEEAERNREHDLERASRAPRCIGNNSXXXXXXXXXXXXXXXXPKHTAKESHSAP-GRRD----PPYGNNHGEGVGRDNKRDSGKGMSGAGXXXXXXXXXXXXRDGKAVNNKA-VGKGQRRPGKVELTKAEAESLASEQKAEREAKAKE----------DREK-------------------LKETRKERK------------------KLKRGGGEDVSACGSEDYWSQSGPGMGGHGDGGAIAETLTPGRVVVDQDDQLG--INTAQFDTAEFEVVKSRKELQKERKEQRDQEEKAAAEXXLXXXXXXXXXXXXXXXXXXXXXXXXQREMNRAEMRKAEVQRRADAQAKVKAAKDAAXXXXXXXXXXXXXXXKSSQGQEGVASVVVKQIGEAGSVVKRTLTPQKETKERTV------DAGKSRGPSSTEKTVPQWTATS-PTAAXXXXXXXXXXXXXXXXXALPPAAVPITQVSDLSPPXXXXPLPTASSVSEPVGTQPLTSVMAIQFGDV------------------------PMVITSDNITEADRR-----------VVVAPSLPKKTGTSTRPAAVKDDPSKQDERGAAVALPAEPAPAAGSASAATSIPSVSISNMT---------SRPIPTTSSTAPXXXXXXXXXNRVTSTPVQKSGGTGGTENGSTQSKPDNSKIDNVGGGNPSASSDAAQHTGESRPP-ATKGLLSSPSLAGSVPAPQVSATWKPLPVGIAATAFGMAGKPVDGGNVATASXXXXXXXXXXXXXXXXXXXXASVGRNGGMEAWAASPQAAMARSGGPSFAAGAGQHHREMLSQQLPQQQQQLHAAAQADWMQGRGGRGNAGPSAGGQAQRGSFGPASAPAAPGSAGWSNPGQTLTPQHQTGGGMVGMVGANGGGNSVGGRLRSAPEGFSVGVGGGNPGMLPPP-----LAPRPAPMVRSTSGGRHGSPGASHGHRNNDSAPSGGIATPLAGGXXXXXXXXXXXXFMLGYQSPGARQQ-LMQGGANWGGAGFPQ-NVGSPGTA-VAGIAGGMTSPGARQQQQXXXXXXXXA-----------------LYSSFATGVAPGMASSAPNAIATTLPTSSGPT-----------------TVAVPAGAPGVPGGDNVNAPNSVLAAEAPPFIPAGNMGVGSPAMWGLTGPPL---------PAPAGLNGQPQLPAAMMLPTVS-QGVGFGA 8162
G S++SFASKNLNALTKAPAVQ RG+DRA +VVRPA+GAGGRLLVLG KNRD G LSTPVPVNTPSLRREN GQDISVPLVPSGG+GWGA K A PA AR +R PP + G D R P R+ S G GYG Q R G GP GG QGH L +SDFPLEMGG S+AEK QLRPRG + GKG P +S + +R A R G S SPS + + PSPLGG R G GD +GPPS+ SR+ +S FG R +G +N A G + G XXXXXXXXXXXXXXXX GG GW GG RGR W+R R P RERELDWEHRRK XXXX GGR+ ER+ G + S R S++ S D PYSS R S R G +RP P +SPAA +A +V + + R ++EER+ AE VAE+A A AERERRLAE+SDEVEK ALR+R ELERLRAEK+ + T T + N+ GRGYEPD YGRDDPYR DVERERAAQ AA X V A+L RG+EE VEA TG R IQ RQ+PPA+ V K AA +A XX ESP A H K R AEPS+L+L+ + T + +GGRG KA PS GG S S+ L P+ AH R+ G A + P P H PP P + R+FSSLF G +Q++ + GA + G AG +G G G E G RDW EAGRGP RE K+IFDHKTGKMRDVEDSDK R +DRP P QD R+D Q XXXXXX P+ Q+ A H P +P GPPS++ G A + ++ G + SR L A + H+GGS GW++RRE+ G WDER G GR G + +K WERGV++ GRG + R + WD Q A S RRR SPL D P +P + XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX K T + + P+ + Q V+S XXXXXXXXXXXXXXXXXXXXX + E+REAIRARDERERDLAVRQR+S+ + + ++ + H Q+ +R D EK RRAER+ ES +RPPRT+GALYR + +G +E+V NAD+PEG DPLQ W+ +TEE++R XXXXXXXXXXX P+ SAP RD + N G G+D + G G R ++ A + G R G+ K S A A R A+A++ DREK +E KE+ K+KRGGGE+ +A + +G G+ G TPGRVVVD+D LG +N ++FDTAEFEVVKSR+E+QKERKE A XXXXXXXXXXXXXXX Q E+N+AE RKA +VKA XXXXXXXXXXXXXX S Q+ + +A + P T V D GKS P +T S PT++ A P ++ TQ S P PL A + T+PL+ AIQFG V + + + +R V APS + G S+ + + D + + V P + +P G + +P V + T + P + + T + G G T++ P S V A + ++Q T RPP +GLLSSPSLAGS+PAP A+WKPLPVG+A+ GN A G NG F AG G + E Q A + G GG QRG+FGP SAPAA G+AGW N P GG+VGM+GANGGGNSVGGRLRSAPE F +G G P + P LA RP MVR +GGR GSPG H +R ND + +AT +A G F+LG+ SPGARQ + GG GFPQ GSPG A + G+ G XXXXXXXX Y SFA GV P P + +P S+ PT VA A A P NS LAAEA PFIPAG MGVGSPAMWG+ GP P+P + P + LPT+ QGV FGA
Sbjct: 37 GTTSKKSFASKNLNALTKAPAVQ-RGSDRAGEVVRPAFGAGGRLLVLGTKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGIGWGAGKVTAPAPTVAEP--------------APAGPARDDRSAPPMAGGGRXXXXXXXXXGYGHDNRSAGPTRSSRWPNNDXXXXXXXXXXXXXXXXXXXXXXXXXGRXXXXXXXXXXXXXXRDGSPAGRENGMGAGGYGGQG--------------RLGGGPPGGGGMQGHYLRESDFPLEMGGGASRAEKAPQLRPRGGTGPDTSQGKGDPPPFASPSGGSREGQQTRAAAAVGRAGGNGNNSPSPSSHAMAPSSGPRDLDGM------------PSPLGGGRYGDGGDHFGHHGPPSVPSRLSGRGASPFGSRLAGYGGTANESARGD-YTRGGXXXXXXXXXXXXXXXXXXGGR------------------------GWSGGWDGGRGREWDRGRGQPPPHPRERELDWEHRRKXXXXXXXXX--------XXXXXXXGGGGRSSREWGERENRGAGRGSFRSPSMTGMASPD-PYSSLGRMS-RRPLEGGQPSGVARPPP-SSPAAXXXXXXXXXXXXXXXXXXXXXTATAVVSETK--------RPMSEEERKNHAEAVAEEAKAFAERERRLAEKSDEVEKGVALRARRELERLRAEKDKGKEXXXXXXXXX----------------TDGQETGSRQXXXXGNTXE---------------GRGYEPDEYGRDDPYRXXXDVERERAAQQAAAAALSPAFGPMSSADRSASAWALAGGXXXXXXXKARLKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPAA---VVKVAAEEAAXXXXXXXXS----------ESPAVKPAP--HTKSRTAEPSKLLLSGKGG-----------TNLHAAAAAGGRG--------------KAPPS-------------------GGNSGSSVSLQWLTPRHEGEAGEAHSRSQRGGQAEHNSGDPSAPPA---------HCTPPCPASAQGARSFSSLFAGAGQQQKQKHQHTGA-------------------------QRPGDAGVEGQMWEGEGRESGHDHDRDWPEAGRGPXXXXSREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGP--QDARLDGRTPTQQXXXXXXXXXPRLLQSSGNGNAKSGQHHQSPRQQPSSRGGPSGPPSDSPQTGGRGANDVAVAAESPEMRKVAGQAQSLQQQDSRFGGHLPSSATAAAAPREHEGGS---GWDQRREFSGGRGRGAGRGGRGGWDEREXXXXXXXXG-------------GTGRGGRGGEGVFVRDGKPGDNKVWERGVQQPVVASGGRGGVNREEAWDRQQKHATSSRRRASPL---DNPPTPDSSPXXXXXXXXXXXXXXXXXXXXXXXXXGLRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTTTDTPLXXXXXXXXXXXXXQQPSSN--HQDSLVASAGTSXXXXXXXXXXXXXXXXXXXXX----------AAAAAALESREAIRARDERERDLAVRQRKSMKMDLNAASAPRDAAGVKQHQQRPKRDGHDKKDAEKARRAERDRTRREKRHDDTERQRNRSEAGGRARREARRKESSERPPRTSGALYRYGSPDLAPGGGSGVSEYVVYVNADIPEGAPDPLQARWNAMTEESDRXXXXXX------XXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDVRASFPTNPGASGGKDRHSNGAAGGGGTAVKERRDQARNEVRRNQSQQQSAPISSGPREGGEGVKGKEGLVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATGDKEGAAAALMKKQELAKEQXXXXXXXXXXXXXXXXXXXKMKRGGGEEATAALAGGASGYTGSGVSGXXXXXXXXXXXTPGRVVVDKDCHLGMNVNMSEFDTAEFEVVKSRREVQKERKEXXXXXXXXAX----XXXXXXXXXXXXXXXQAARGQIKAQLELNKAETRKA---------TEVKAKXXXXXXXXXXXXXXXXXXVASMSEQDRRSDQEASSREKANASTHEPPAPAATTSSAPVASVKRQDNGKS--PVTTAXXXXXXXXXSAPTSSVPSRAGHSNARPDGAFPAEPASSPKATQSSKS--PVVLPPLSPAKT------TRPLSP--AIQFGSVGADNGAGWSATPKNEGKTLVDCAGAYAESGGGVADGERSGLPAFGPETTPEVCAPSRNGEAGPSSGASKSRHDAPRPN-----VPRPGDKSPPLGEGA----LPEVGVVEPTREVGLNPPSKQQQPASILSGENDKQGERNGKDETESTHSDDRGGGQEPESDTRASPPTSPPSGV---QQPALNPSSQSTSHGRPPPVAEGLLSSPSLAGSIPAPHTQASWKPLPVGLASAVLST-------GNGVAAVGAGAGGYNNKPHNKNSEWAPGRGGYNG--------------------FGAG-GTGYGEQQGPGNFGQNNVSTAFGATHPVYGFGGP-----------QRGNFGPNSAPAALGAAGW-NTASVFNPLQN--GGVVGMLGANGGGNSVGGRLRSAPEAFGLGAG---PSQVVPRAGYGRLAQRPPAMVRGANGGRDGSPGQPH-NRANDPGQTVRLATSVAAGMAGGPFGG----FVLGHHSPGARQPPIPPGGIQAWTGGFPQAGGGSPGGARMTGVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFYGSFAGGVTP------PGSTGLMVP-STQPTMQVARWQQPASQHIVTSVVATAASAASNPPLSMAEGGNSGLAAEAAPFIPAGAMGVGSPAMWGMAGPQTQQQPTGVGAPSPGAASVNAINPTMLTLPTMGGQGVSFGA 2632
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: D8LL01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL01_ECTSI) HSP 1 Score: 254 bits (648), Expect = 1.420e-63 Identity = 603/1728 (34.90%), Postives = 701/1728 (40.57%), Query Frame = 3
Query: 267 RRSFASKNLNALTKAPAVQSRGADRA-DVVRPAYGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGANKHPAXXXXXXXXXXXXXXXXXXXXXSVPASARPERYVPPNKSAFLRDRPGGVA---------------------ADARGYPPQRAPSVRATYGGQDGRGYGVQXXXXXXXXXXXXXXXRPGLGPAGGNAGQG--------------HVLTDSDFPLEMGG-TSKAEKVSQLRPRGLSFMPFLCGKGGMGPDSSGERTEERNETSRTARGAQAGPA-------------------SKSPSHYPVXXXXXXXXXXXXXXXEPPARDHPH-PSPLGGARSGPVGDGRDFYGPPSISSRMGDARSSSFGPR-SGLANASNSYAGGGGVSNGSMXXXXXXXXXXXXXXXXYGGHHSHHNGDFRGNGGNAGLGGGRKPGGWDGGXXXVRGRGWERDRVGPS---RERELDWEHRRKWNP---------PDRIDGRDRDRGPDIRDXXXXXDGGRNWERARERDGGGIQFSPRPTSLSASLSGDRPYSSANRASALRGASDGHGHDASRPSPIASPAAGPMGAPSAVSVPAASTPAAPTPPPRGATDEERRKVAERVAEDAMAVAERERRLA-------ERSDEVEKSAALRSRMELERLRAEKEDNERKAKADADRRQHTPRHPEASQSSQAETSASRTAATDRNASTNSWSTATQSHEGGEQEGAGGRGYEPDGYGRDDPYRRQEDVERERAAQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------QPK-VTALLSRGQEEVVEASTGNRFIQARQIPPASPAIVGKTAAADAQGARRQQXXXXXXPGTSAAQESPRALKAKDAHRKPR-AEPSQLVLAE--------------RSSKPES------ETSVQWLTLRREGSESGGRGAQSEADKKAAEKDKKATPSAWAQPACSNQPSNPGRGGGGGTSASNGPLLLDRPKDPRAHDRTTGQDAAAVANLPLRSPRILRAGESGQHQHPPSPFAKDCGRTFSSLFVPPGGEQREITEGGGAGSGTIGVGENTNSANDSSNDNLAVGESRGGAGFQGVRGGG----------VELGRDWAEAGRGPLPREQKRIFDHKTGKMRDVEDSDKSRPMNDRPPRPLAQDTRIDSHVSHQXXXXXXX-------HGLPQPFQTDQA--DPLTDHAPPSPRPGPPSEASTRQGPPVPTEAAPVSNADVPDRRGDRREPHTGVSR----RFDPLKAHSRNHSHDGGSQGRGWEERREWGGXXXXXXXXXXX--WDERRGDGRER---GWGRXXXXXXXXXXXXXVGRNESSGRDMDKTWERGVRKG-AQEDGRGDIVRGK-WDGA--QAPSMRRRVSPLLESDPPGSPAETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIVTAVQATTSDAHPKTATPSPVKKINTWEGRRGAPLTSSSSSPSREAPTQSLGQQAGGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGVSGVEEENREAIRARDERERDLAVRQRRSVDLASGKEVEVQRSSTRQHHGQQQQRKKEADGDVEKTRRAEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRDRPPRTNGALYRRATI-------AGTAE---FVNADVPEGWTDPLQDHWDVITEEAER 5003
++SFASKNLNALTKAPAVQ RG+DRA +VVRPAYGAGGRLLVLG+KNRD G LSTPVPVNTPSLRREN GQDISVPLVPSGGVGWGA K A XXX +D R YPP RAPS R +G Q G XXXXXXXX G+G AGG GQG H L +SDFPLEMGG S+AEK QLRPRG G GPD+S + + S SPS + + RDH PSPLGG R G GD +GPPS+ SR+ SSFG R +G +N A G + G XXXXXXXXXXXXXXXX GG GW GG RGR W+R P RERELDWEHRRK PDR G GGR+ ERD G + ++ PYSS R S R G + +RP P +SPAA E+SDEVEKS ALR+RMEL +A R T SQ +GG + GRGYEPD YGRDDPYRRQEDVERERAAQ AA XXX +PK V A+L RG+EE VEA TG R IQ RQ+PP XXXXX A ESP A H K R AEPS+L+L+ R P S S+QWLT RREG E+G +S+ +A K GG SA P PR PP P + R+FSSLF G GA + G AG +G GG RE K+IFDHKTGKMRDVEDSDK R +DRP P QD R+D Q XXXXXX +G + Q Q+ ++ PS GPPS++ G A + + + G + SR R A R H GRGW++RRE+ G WDER G GWGRXX R+ + G K WERGV++ A GRG + R + WD APS RRR SPL D P +P ++S XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX K T APL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E+REAIRARDERERDLAVRQR+S+ + + ++ + H Q+ +R D EK RRAER+ ES +RPPRT+GALYR + +G +E +VNAD+PEG DPLQ W+ + EE++R
Sbjct: 41 KKSFASKNLNALTKAPAVQ-RGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAELAPAGPARDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDPRSYPPPRAPSGRPHFG-QRGX------XXXXXXXXGSPAGRENGMG-AGGYVGQGRSXXXXXXXXGMQGHYLRESDFPLEMGGGASRAEKSPQLRPRG-----------GTGPDTSQGKGDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSPSPSSFAMAPSSGP-------------RDHDGMPSPLGGGRYGDGGDHYGHHGPPSVPSRLSGRGGSSFGSRLAGYGGTANESARGD-YTRGGXXXXXXXXXXXXXXXXXXGGR------------------------GWSGGWDGGRGREWDRGXXQPPPHPRERELDWEHRRKXXXXXXXXXXXXPDRGGG-----------------GGRSSREWGERDNRGAGRGSFNSPSMTGMASPDPYSSLGRMS-RRPLEGGQPNGVARPPP-SSPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSDEVEKSVALRARMELXXXXXXXXXXXXXXXXNA--RSRTDGQEAGSQ-----------------------------QQGGADDTEEGRGYEPDEYGRDDPYRRQEDVERERAAQQAAAAALSPALGPMSSADRSASAWALGXXXXXXXXXXKARPKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPXXXXXXXXX-------------XXXXXXAEKVASESPAVKPAP--HTKSRTAEPSKLLLSGKGGANLHAAAAAGGRGKAPSSGGDSGSSVSLQWLTPRREG-EAGEAHLRSQRGGQAEHK-------------------------GGDPSA---------PPPPRT---------------------------------PPCPASAQGARSFSSLFAGAGQXXXXXXXXAGA-------------------------QRPGDAGVEGQMWGGEXXXXXXXXXXXXXXXXXXXXXXXXSREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGP--QDARLDGRTPTQQXXXXXXXXXXXXGNGNAKSGQHHQSPRQQVSSRGGPS---GPPSDSPRTGGRGANDVAVAAESPETREVAGQAQSLQQQDSRFGGHRSSCAAAAPREHE-----GGRGWDQRREFSGGRGRGVGRGGRGGWDEREGXXXXXXXGGWGRXXRGGEGVFV-----RDGNPG--DKKVWERGVQQPVAASGGRGGVNREEAWDRQPKHAPSSRRRASPL---DNPPTP-DSSPXXXXXXXXXXXXXXXXXXXXXXXGVRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTTT-----NAPLP------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALESREAIRARDERERDLAVRQRKSMKIDLNAASAPRDAAGVKQHQQRPKRDDHDKKDAEKARRAERDRVRREKRHDDTERQRNRSEAGVRARREARRKESSERPPRTSGALYRYGSPDVAPGGGSGVSEHVVYVNADIPEGAPDPLQARWNAMAEESDR 1514
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A8J2S6H3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6H3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.440e-13 Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 267 RRSFASKNLNALTKAPAVQSRGADRADVVRP--AYGAGGRLLVLGNKNRDTAAP--GSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGW 527
R+SFAS+NLN+ T+ P + RP AYG GGRLLVLG + TAA +++ PVP+NTPSLRRE+ GQD+SV LVPSGG GW
Sbjct: 8 RKSFASRNLNSATRKP----------EQARPQRAYGGGGRLLVLGKRPEPTAASKTNTVAAPVPMNTPSLRRESGGQDVSVKLVPSGGGGW 88
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A7S3NKR7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKR7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.410e-13 Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 3
Query: 225 STTSSQDAPTGAGSRRSFASKNLNALTKAPAVQSRGADRADVVRPA--YGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGANKHP 545
S+ SS P R++F S+NLNALT+AP + DVVR YG+GGRLLVLG + + P S+ P P+NTPSLRREN GQD+SV LVP GG W + + P
Sbjct: 6 SSPSSGSVPPSGAQRKNFTSRNLNALTRAP--------KEDVVRREGRYGSGGRLLVLGKAQGEKSTP-SVVAPTPLNTPSLRRENRGQDLSVKLVPGGGS-WASPQTP 104
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A8K1C7M8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7M8_PYTOL) HSP 1 Score: 69.7 bits (169), Expect = 2.240e-8 Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 3
Query: 246 APTGAGSRRSFASKNLNALTKAPAVQSR------GADRADVVRPAYGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGANKH 542
A + + S+ F+S+NLNA+ KAP +S A+R V+RP GA G A +++ P P+NTPSLR+EN GQDI V LVPSG GWG K+
Sbjct: 68 ARSSSSSKTKFSSRNLNAVYKAPVSKSSESAGFPSANRMLVLRPVRGAVG-----------VAKANTVAAPTPINTPSLRKENMGQDIHVNLVPSGRNGWGNEKN 161
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A662YJP3_9STRA (BAT2_N domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJP3_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.590e-8 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3
Query: 276 FASKNLNALTKAPAVQSRGADRADVVRPAYGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGAN 536
F+S+NL+A+ KAP + A P + GR+LVLG R AAP P P+NTPSLR+++ GQD+ V LVP+GG GWG+N
Sbjct: 9 FSSRNLSAVFKAPLRSKPLPENA--TGPLQRSSGRMLVLG---RAAAAP-----PAPLNTPSLRKQHEGQDVGVSLVPTGGGGWGSN 85
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A7S2SR64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR64_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 5.100e-7 Identity = 49/95 (51.58%), Postives = 59/95 (62.11%), Query Frame = 3
Query: 255 GAGSRRSFASKNLNALTKAPAVQSRGADRADVVRPAYGAGGRLLVLGNKNRDTAAPGSL--STPVPVNTPSLRRENNGQDISVPLVPSGGVG-WG 530
G +++F S NLNALTKA A A R YGA RLLVLG + A+ SL S P+P+NTPSLR+E+ GQD +V LVPSGG G WG
Sbjct: 53 GQSKKKTFGS-NLNALTKASATN------APTQR--YGAN-RLLVLGKGGKSGASKASLVPSAPIPLNTPSLRKESGGQDTTVQLVPSGGGGTWG 137
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Match: A0A662YC69_9STRA (BAT2_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YC69_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.130e-6 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 3
Query: 276 FASKNLNALTKAPAVQSRGADRADVVRPAYGAGGRLLVLGNKNRDTAAPGSLSTPVPVNTPSLRRENNGQDISVPLVPSGGVGWGAN 536
F+S+NL+A+ KAP + A P A GR+LVLG R AAP P P+NTPSLR+++ GQD+ V LVP+GG GWG N
Sbjct: 9 FSSRNLSAVFKAPLRSKPLPENA--TGPLQRASGRMLVLG---RAAAAP-----PAPLNTPSLRKQHEGQDVGVSLVPTGG-GWGNN 84 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig227.6043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig227.6043.1 >prot_H-paniculata_contig227.6043.1 ID=prot_H-paniculata_contig227.6043.1|Name=mRNA_H-paniculata_contig227.6043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2965bp MASSATPTSTTSSQDAPTGAGSRRSFASKNLNALTKAPAVQSRGADRADVback to top mRNA from alignment at H-paniculata_contig227:17614..38239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig227.6043.1 ID=mRNA_H-paniculata_contig227.6043.1|Name=mRNA_H-paniculata_contig227.6043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=20626bp|location=Sequence derived from alignment at H-paniculata_contig227:17614..38239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig227:17614..38239+ >mRNA_H-paniculata_contig227.6043.1 ID=mRNA_H-paniculata_contig227.6043.1|Name=mRNA_H-paniculata_contig227.6043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=17790bp|location=Sequence derived from alignment at H-paniculata_contig227:17614..38239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |