mRNA_H-paniculata_contig22133.5863.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22133.5863.1
Unique NamemRNA_H-paniculata_contig22133.5863.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: D8LES4_ECTSI (CCT-theta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES4_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 4.410e-143
Identity = 213/236 (90.25%), Postives = 224/236 (94.92%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            QG VKRAENAKVAVFACGLE SSTETKGTVLIRTGEELM+YNKGEEKVVED++K+I +AGTKVIVAGGTVSDMCMHFIEKY MM++KVLSKWELRRICNAVHATALVRMGAPTPDEMG CALVEV+EVGLRKVTVFSQ+DDDSRIATIVLRAST+SLLNDLERAVDDSVACVRGLCRDPRFVPG GATEMELAHQI K GESQ  LDQYAI KFAEALEV+PRILSETSG DAEKV
Sbjct:  233 QGLVKRAENAKVAVFACGLEMSSTETKGTVLIRTGEELMSYNKGEEKVVEDAMKSIADAGTKVIVAGGTVSDMCMHFIEKYEMMVIKVLSKWELRRICNAVHATALVRMGAPTPDEMGDCALVEVREVGLRKVTVFSQDDDDSRIATIVLRASTQSLLNDLERAVDDSVACVRGLCRDPRFVPGGGATEMELAHQIFKHGESQTGLDQYAIKKFAEALEVVPRILSETSGQDAEKV 468          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A425BWK5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BWK5_9STRA)

HSP 1 Score: 309 bits (791), Expect = 3.630e-101
Identity = 146/236 (61.86%), Postives = 195/236 (82.63%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G VK+A +AK+A+F CGLE SSTE K TVLI+  +ELMNYNKGEEK +E++++AI E+G  V+V+GG++S+M MHF+EKYN+M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+E+G +KVTVF Q+ +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI  FGE+   LDQYAI KF +A+EV+PRIL+E SG  A +V
Sbjct:  111 EGNVKKALHAKIAIFGCGLEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMAMHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 346          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A835Z415_9STRA (CCT-theta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z415_9STRA)

HSP 1 Score: 313 bits (802), Expect = 3.830e-101
Identity = 151/236 (63.98%), Postives = 193/236 (81.78%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G +KR E+AKV VF CG+EASSTE KGTVLIRT EELMNYNK EEK++E+ IK+I ++G +V+VA G++S+M +H++EKY +M++K+ SKWELRR+C A+ ATALVR+G  TPDEMG   LVEV+EVG R +TV +++D+D+R+AT+VLRASTE LL+DL RAVDD V C R LC DPRFVPGAGATE +LA ++  F ++Q  LDQYAI KFAEALEV+PR+L ETSG DA  V
Sbjct:  233 EGSIKRVEDAKVTVFGCGIEASSTEAKGTVLIRTAEELMNYNKSEEKLMEEIIKSIADSGAQVVVANGSISEMALHYLEKYGLMVLKITSKWELRRLCAALRATALVRLGPATPDEMGRATLVEVREVGGRNITVVARDDEDARLATVVLRASTEPLLSDLGRAVDDGVQCARALCLDPRFVPGAGATEAQLAARVRAFADTQTGLDQYAIRKFAEALEVVPRVLCETSGLDATAV 468          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: H3G986_PHYRM (CCT-theta n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3G986_PHYRM)

HSP 1 Score: 307 bits (787), Expect = 5.080e-99
Identity = 145/236 (61.44%), Postives = 194/236 (82.20%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G+VK+A  AKVAVF CG+E SSTE K TVLI+  +ELMNYNKGEEK +E++++AI E+G  V+V+GG++S+M +HF+EKYN+M +K+ SKWELRR+C AV+A A+VR+GAPTPDEMG C  V V+E+G +KVTVF Q  +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI  FGE+   LDQYAI KF +A+EV+PRIL+E SG  A +V
Sbjct:  233 EGYVKKALKAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMSLHFLEKYNLMAIKIQSKWELRRLCRAVNANAMVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFEQEQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKGFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 468          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: K3WHS8_GLOUD (CCT-theta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHS8_GLOUD)

HSP 1 Score: 306 bits (785), Expect = 1.040e-98
Identity = 144/236 (61.02%), Postives = 193/236 (81.78%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G VK+A NAKVAVF CG+E SSTE K TVLI+   ELMNYNKGEE+ +E++I+ I E+G  V+V+GG++S+M +HF+EKY ++ VK+ SKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+E+G +KVTVF+Q D+D++I+TI+LRAST+++LND+ERA+DD V CV+  C+DPRFV GAGA+E+EL+ Q+  FGE+   LDQYAI KF +ALE++PRIL+E SG  A +V
Sbjct:  233 EGNVKKALNAKVAVFGCGIEVSSTEAKSTVLIKDASELMNYNKGEEQRLEEAIRGIAESGANVVVSGGSISEMALHFLEKYKLLAVKIQSKWELRRLCRAVNANALVRLGAPTPDEMGLCDSVTVKEIGGKKVTVFNQEDEDAKISTIILRASTDNVLNDIERAIDDGVNCVKAACKDPRFVAGAGASEVELSRQVKSFGEATPGLDQYAIKKFGDALEIVPRILAENSGKMATEV 468          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: M4B3A9_HYAAE (CCT-theta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3A9_HYAAE)

HSP 1 Score: 307 bits (786), Expect = 1.340e-98
Identity = 145/236 (61.44%), Postives = 195/236 (82.63%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G+VK+A  AKVAV+ CG+E SSTE K TVLI+  +ELMNYNKGEEK +E++I+AI E+G  V+V+GG++S+M +HF+EKYN+M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+E+G +KVTVF Q+ +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI  +GE+   LDQYAI KF +A+EV+PRIL+E SG  A +V
Sbjct:  233 EGFVKKALKAKVAVYGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAIRAISESGAVVVVSGGSISEMALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDDRFVAGAGSTEIELSRQIKSYGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 468          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: W7TQJ5_9STRA (Chaperonin containing tcp1 theta subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQJ5_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.110e-97
Identity = 147/233 (63.09%), Postives = 193/233 (82.83%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDA 699
            +G +KRA  AKVAVF CG+EASSTETKGTVLIR  EEL+NYNKGEEK++ED IK+I ++G +V+V GG++S+M +HF+E+Y +M+VK+ SKWELRR+C AV+ATALVR+GAPTP+E G     EV+EVG RKVTVF Q  ++SR+A+I+LRAST+++L DLERAVDD V  V+ LC+D RF+PGAGA E+ELA +I+K  ++   LDQYA+ KFAEALEV+PR L+E+SG +A
Sbjct:  233 EGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEA 465          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A2D4C5B0_PYTIN (CCT-theta n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5B0_PYTIN)

HSP 1 Score: 305 bits (780), Expect = 5.100e-96
Identity = 145/236 (61.44%), Postives = 191/236 (80.93%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G VK+A  AKVAVF CG+E SSTE K TVLI+  +ELMNYNK EEK +E++I+AI E+G KV+V+GG++S+M MHF+EKY +M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+E+G +KVT+F Q  +D++++TIVLRASTE++LND+ERA+DD V CV+  C+D RFV GAGATE+EL+ QI  FGE+   LDQYAI KF +ALE++PRIL+E +G  A +V
Sbjct:  413 EGVVKKAMGAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKSEEKHLEEAIRAIAESGAKVVVSGGSISEMAMHFLEKYQLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTIFRQEKEDAKMSTIVLRASTENVLNDIERAIDDGVNCVKATCKDARFVAGAGATELELSRQIKSFGEATPGLDQYAIKKFGDALEIVPRILAENAGQMATEV 648          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: W4H1N7_9STRA (CCT-theta n=2 Tax=Aphanomyces TaxID=100860 RepID=W4H1N7_9STRA)

HSP 1 Score: 298 bits (762), Expect = 6.940e-95
Identity = 139/236 (58.90%), Postives = 192/236 (81.36%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G VK+ + AKVAVF CG+E SSTE K TVLI+T +ELMNYNKGEE+ ++++I+AI E+G  V++AGG++S+M +HF+EKY+++ +++ SKWELRR+C AV+ATALVR+GAPTP+EMG C  V VQEVG +K+TVF Q+ +D+++ATI+LRAST+++LNDLERA+DD V  V+  C+D RFV G GATE+E+A QI  FG +   LDQYAI KFAEALE++PR+L+E +G    +V
Sbjct:  266 EGSVKKVDGAKVAVFGCGIEVSSTEAKSTVLIKTADELMNYNKGEEERLDEAIRAISESGATVVIAGGSISEMALHFLEKYHLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVSVQEVGGKKITVFRQDQEDAKMATIILRASTDNVLNDLERAIDDGVNTVKAACKDGRFVAGGGATEIEVARQIEAFGNTIPGLDQYAIKKFAEALEIVPRMLAENAGQQGTEV 501          
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A485KST6_9STRA (CCT-theta n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KST6_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.150e-94
Identity = 134/236 (56.78%), Postives = 195/236 (82.63%), Query Frame = 1
Query:    1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
            +G VK+ + AKVAVF CG+E S+TE K TVLI+T +ELMNYNKGEE+ ++++I+AI ++G KV++AGG++S+M +HF+EKY ++ +++ SKWELRR+C AV+ATALVR+GAPTP+EMG C  V+V+E+G +K+TVFSQ+++D++++TI+LRAST+++LNDLERA+DD V  V+  C+D RFV G GA+E+E+A Q+  FG +   LDQYAI KFAEALE++PR L+E +G  A ++
Sbjct:  233 EGSVKKVDGAKVAVFGCGIEVSATEAKSTVLIKTADELMNYNKGEEERLDEAIRAIADSGAKVVIAGGSISEMALHFLEKYELLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVQVKEIGGKKITVFSQDEEDAKMSTIILRASTDNVLNDLERAIDDGVNTVKAACKDVRFVAGGGASEIEIARQVEAFGNTTPGLDQYAIKKFAEALEIVPRTLAENAGQMATQI 468          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LES4_ECTSI4.410e-14390.25CCT-theta n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A425BWK5_9STRA3.630e-10161.86Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A835Z415_9STRA3.830e-10163.98CCT-theta n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
H3G986_PHYRM5.080e-9961.44CCT-theta n=27 Tax=Peronosporaceae TaxID=4777 RepI... [more]
K3WHS8_GLOUD1.040e-9861.02CCT-theta n=1 Tax=Globisporangium ultimum (strain ... [more]
M4B3A9_HYAAE1.340e-9861.44CCT-theta n=1 Tax=Hyaloperonospora arabidopsidis (... [more]
W7TQJ5_9STRA1.110e-9763.09Chaperonin containing tcp1 theta subunit n=2 Tax=M... [more]
A0A2D4C5B0_PYTIN5.100e-9661.44CCT-theta n=2 Tax=Pythium insidiosum TaxID=114742 ... [more]
W4H1N7_9STRA6.940e-9558.90CCT-theta n=2 Tax=Aphanomyces TaxID=100860 RepID=W... [more]
A0A485KST6_9STRA1.150e-9456.78CCT-theta n=6 Tax=Saprolegniaceae TaxID=4764 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22133contigH-paniculata_contig22133:411..4145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.4
Seed ortholog evalue2.8e-115
Seed eggNOG ortholog2880.D8LES4
Preferred nameCCT8
KEGG koko:K09500
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000323,GO:0001775,GO:0002199,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005813,GO:0005815,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005911,GO:0006457,GO:0006458,GO:0006810,GO:0006887,GO:0006955,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0009506,GO:0009566,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019953,GO:0022414,GO:0022607,GO:0030054,GO:0030141,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031647,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0034774,GO:0035036,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0042623,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044183,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045111,GO:0045321,GO:0045935,GO:0046903,GO:0046931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0055044,GO:0060205,GO:0060255,GO:0060341,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0071840,GO:0080090,GO:0097708,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101031,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904813,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.assists the folding of proteins upon ATP hydrolysis
EggNOG OGsKOG0362@1,KOG0362@2759
Ec32 ortholog descriptionTCP-1-like chaperonin intermediate domain
Ec32 orthologEc-21_005380.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110
Exons5
Model size708
Cds size708
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22133.5863.1prot_H-paniculata_contig22133.5863.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22133 411..4145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929609.3520577-CDS-H-paniculata_contig22133:410..5051622929609.3520577-CDS-H-paniculata_contig22133:410..505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 411..505 -
1691480934.5835853-CDS-H-paniculata_contig22133:410..5051691480934.5835853-CDS-H-paniculata_contig22133:410..505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 411..505 -
1622929609.3696756-CDS-H-paniculata_contig22133:1384..15391622929609.3696756-CDS-H-paniculata_contig22133:1384..1539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 1385..1539 -
1691480934.5980258-CDS-H-paniculata_contig22133:1384..15391691480934.5980258-CDS-H-paniculata_contig22133:1384..1539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 1385..1539 -
1622929609.3875396-CDS-H-paniculata_contig22133:2305..25561622929609.3875396-CDS-H-paniculata_contig22133:2305..2556Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 2306..2556 -
1691480934.6062007-CDS-H-paniculata_contig22133:2305..25561691480934.6062007-CDS-H-paniculata_contig22133:2305..2556Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 2306..2556 -
1622929609.4121852-CDS-H-paniculata_contig22133:3015..30931622929609.4121852-CDS-H-paniculata_contig22133:3015..3093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 3016..3093 -
1691480934.6140175-CDS-H-paniculata_contig22133:3015..30931691480934.6140175-CDS-H-paniculata_contig22133:3015..3093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 3016..3093 -
1622929609.4272065-CDS-H-paniculata_contig22133:4016..41451622929609.4272065-CDS-H-paniculata_contig22133:4016..4145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 4017..4145 -
1691480934.621734-CDS-H-paniculata_contig22133:4016..41451691480934.621734-CDS-H-paniculata_contig22133:4016..4145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22133 4017..4145 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22133.5863.1

>prot_H-paniculata_contig22133.5863.1 ID=prot_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVE
DSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNA
VHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVL
RASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFG
ESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV
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mRNA from alignment at H-paniculata_contig22133:411..4145-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22133.5863.1 ID=mRNA_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3735bp|location=Sequence derived from alignment at H-paniculata_contig22133:411..4145- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGGTGGGTCAAGCGCGCGGAGAACGCCAAGGTTGCCGTGTTCGCGTG TGGGCTGGAGGCATCCTCAACGGAGACGAAGGGTACCGTCCTCATCCGGA CAGGAGAAGAACTCATGAACTACAACAAGGTAGGGGGTACAGTATAGTAG AGTGGAGTAGATACACCCTGATGTGAGTTTCAAGTCCTGAGGAGCCTATG GTCTCCCAATCAGCTGTGCATGTCTTACTTCGCATTGCAAAAGATAAAAA TAATACATGTATTTATATATATATATACATGGTATTTATTCATATATGTA TTTGCTCGTTAAGGAACGAGGCCACACTAGTTGCCCATTTTTTGCTCTAC ACTAAATCCAAGAGAAAAGCCCCCCCCCCCAATCCCCTCCTTTACACCTG AGATGTGCTAGCGAGCTGTCTAGCGTCAAGCTCGTTACCTATTATGTTGA TATATTTAGTCGTTAGTCGTGACTGCTCGTCAACAAAATTTTCTCAAGCA ATCATTTGGTCGTTACGAAATAGGGTAACGCAAGGGTTCTCCTGGGTCGA ATCGGCTTATCACCGAAACAAAATCCCATCCATTTTCTATACATGGAGGT GATTTAAATCCTTTGGGAGCGGACGATGAGCGCAAGTCAATCACTGTTGC TTTGTCGGTGGGAGGAAAAATGCCGACGAAACAACAAATGCTCTTCTCAG ACAGGACGAGAGATCACTCGCTTGCCTGTAAAATCCCCTCTATTCCTTTT TTTCAGCATATAACGCCTTTTTCACATGCAAAACTTTTACCGAAAAGCAC ACGCTAGATAACAGTTTTTTCGAGGTATGGGCCCGCCTGGATTGAAATTT TCTGGAGTACGACGAAAATTACTCGAAAATATGGTGGTATGTACTTTTTT TCTGTTTTTTTTTTTTTCAGGGAAGGGGGTATTTTTTGTTCACTGATGGA ATTGACGACATGTGAGTAGCAGCTAGTCAGGACGAGACTGATTGATTCAT GGATATTATATTTTGTTATTCTATTTATTGTTGTATTTTTGTTTGTCGGC AGGGTGAAGAGAAAGTTGTTGAGGATTCTATCAAAGCCATCTTCGAGGCA GGAACCAAGGTCATCGTTGCGGGGGGAACGGTAAGGGAGAAATGTGCACT AGCATGGCGTCATCAGGCTTGAGGTCTTGTACGGTTAGCGATGCGGTTAC GTACGGAATTTCTTGTGTCTGCATTGGGAAAATAACGCGCAAGTGCCTGA ATTGTCACTGGTGGTGGTGGTGGTGAAGGCTAATAATTACTGTTCGTTGC TGTTTTCTTGTTGTTTCATTGTGTTGTAGTCATTTGTACTTGCTGCACGT GTAGTTTTTGTGGTGGTGATGATCGCTATTGGTGGATGCCGTGTGTTGCC GTCCTATATCGCGTGTTAGATTGAAGCCGTTAGTGACGTGTGTGCATTTC GCGTGTCTTCGTTGGTTGCTTTTGTCATGATCCAATGTTATTGTATCGGT GGTGGTGTTCATGGTCATGGTTGGTTTTTCGTTGCTGTTCGGTACCTCTT CTGTTCCCCTCTTTGTGTGTGTTGTGTGTGGTTGCGCAGGTGAGCGACAT GTGCATGCACTTCATCGAGAAGTACAACATGATGATTGTGAAGGTCTTGA GCAAGTGGGAACTGCGGCGTATCTGCAACGCCGTGCATGCCACGGCCCTT GTGCGCATGGGTGCTCCCACCCCCGACGAGATGGGGAGCTGCGCCCTGGT GGAGGTGCAGGAGGTGGGCCTTAGGAAGGTGACCGTGTTCAGCCAAAATG ATGATGACTCGCGCATCGCGACAATCGTGCTGAGAGCAAGGTAAGGTAGG GGGGCGAGTCTATCTGGTTGTGTGTTTAGTATTTTGTAGGTCTTGCTTCG TTTCCCGGTCATTTTGTTTTAAAGGAGAGGAGGCGTATAGCGTTCAAGGT TATGCAGCTAGCTGACTTAAGCCTCGGGTTGTGTATATTTGTCAGCAAAA GTTGGATGATGACCACGAAGGGGTATCGTGACATTACTACCCTAGGGAAA TGCCAAGGGTAGCTTCACCAGAGGGACAGTGGAAAAAGAGTGAATGGAGT GAAGAGCGAGTCGAAAGTAGAAGCGAGATAAAATGTTATCTGTAGGACAC AGGACGATAACCGTACAGCGAAATGGGCGCTTGCTGAGCATCTTCAAGTA AAGCTGCTGGATTACTTACCCACGATGTGTGACGAAACCAGGGGGTTGTT TGTCATGAGGGGGCGGATTGATGTTTGTTGTGTTGTGTGATAGATTGTTC GCTCTTGTCGTATCTTGTGTGTTGTTGTGTCTTTTTGGCCTAGTGAAGAG CTTGTCTCATGTTGCACTTTTTTTTTGTCATGTTCCGTGCCCTTTGTTTT TTTTACTTTTGTACCGTATTTCTTTGTGTTGAATAGTTCATGTTTATCGT ATCGTATCGTATCTTACCTTATCTTACCTTGTTATCTTGATTTCCCTTCT TTGATATTTTATCCCATCCAGTCTTATACCGTCTTATCTCATCTGGTCTC GTCCAATCTCATTTCATGCCATATGGTATTATAATACTGTGTTCATCCTT CACCAGCACGGAGTCATTGCTAAATGACCTTGAGCGCGCGGTGGATGACA GCGTGGCGTGCGTTCGAGGCTTGTGCCGAGACCCTCGGTTCGTGCCCGGT GCGGGCGCAACGGAGATGGAGCTGGCTCACCAGATCTCGAAGTTCGGCGA GTCACAGGCGAGTGTCTTGTGTTTGTTGATTTTGTTTTTTTCTATAAAAT AATATGGGTGTTTTCTTTCTTCAATTCATAACGTCAAATAAAATAAAGTA AATATATATATATATATATATATATATAAATATTTATTATCCCACCCCAG TTAGCACAACTGAACTTTGAAGTCAGCTGCATTTCCCCGCCCCCCTTTCT CCTCCCCTCCAAAAAAAAAACTCAACATCAAACGGTAAACATTTAATTCC AATTTTATAAGGCATCGCAACGGAAAATCAGACCCGTTTTAGTAATTGCT GATGCTTGGGGAATTTTCAATTCTGATAGAAGCGATGCACCTTCCACCAT ATATATATATATATATATATATATATATATATATATTTTTTTTTTTTCAT AATTTCATATTTGGTGGTGGTGGTCGTTGTTGTAATTTCGGAACATTTTT TCAGGTCTGTACTAGAGTGATTCAAAACGAAGGAATATTCGTGCTAGCAC CGCTAGCAGCAGTGTTGTTCGCTTATCGAGCTTCAGCTGCAAACACGGCG AGTCCGTGAGTACAGTACAAACAAGCATGAACTGTACTGCACGGGCTCAA TGTAGCCGTCTTCGTACTATCCTGGTAGATTCCATTATTCCTTGACTCTT TGATCGTGATACGTAAATAGTTTTTCCCCTGTCTGTGCTGCTGAGGAAAA TCGATGGTACAGATGAACTCTAGATGTTAAGGCGTTCAGTAGTACAACAT AGGTAGTCATGTCTGTGTATAGGGATTACTCTCTATGTCTCACTATACCT ATTTGTTCTATGGCATAATTTGCTTTTATATTTCACTCTTAACAGTGTTT TCGTGTTGTTCTTTTCCGTATTCCTCGCTGAAGCAGACAGGACTAGACCA GTACGCTATCAACAAGTTCGCCGAAGCCCTGGAGGTCATCCCGCGCATTC TCTCTGAGACCTCTGGCCATGACGCTGAGAAGGTA
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Coding sequence (CDS) from alignment at H-paniculata_contig22133:411..4145-

>mRNA_H-paniculata_contig22133.5863.1 ID=mRNA_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at H-paniculata_contig22133:411..4145- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGGTGGGTCAAGCGCGCGGAGAACGCCAAGGTTGCCGTGTTCGCGTG
TGGGCTGGAGGCATCCTCAACGGAGACGAAGGGTACCGTCCTCATCCGGA
CAGGAGAAGAACTCATGAACTACAACAAGCAGGGGTGGGTCAAGCGCGCG
GAGAACGCCAAGGTTGCCGTGTTCGCGTGTGGGCTGGAGGCATCCTCAAC
GGAGACGAAGGGTACCGTCCTCATCCGGACAGGAGAAGAACTCATGAACT
ACAACAAGGGTGAAGAGAAAGTTGTTGAGGATTCTATCAAAGCCATCTTC
GAGGCAGGAACCAAGGTCATCGTTGCGGGGGGAACGGGTGAAGAGAAAGT
TGTTGAGGATTCTATCAAAGCCATCTTCGAGGCAGGAACCAAGGTCATCG
TTGCGGGGGGAACGGTGAGCGACATGTGCATGCACTTCATCGAGAAGTAC
AACATGATGATTGTGAAGGTCTTGAGCAAGTGGGAACTGCGGCGTATCTG
CAACGCCGTGCATGCCACGGCCCTTGTGCGCATGGGTGCTCCCACCCCCG
ACGAGATGGGGAGCTGCGCCCTGGTGGAGGTGCAGGAGGTGGGCCTTAGG
AAGGTGACCGTGTTCAGCCAAAATGATGATGACTCGCGCATCGCGACAAT
CGTGCTGAGAGCAAGGTGAGCGACATGTGCATGCACTTCATCGAGAAGTA
CAACATGATGATTGTGAAGGTCTTGAGCAAGTGGGAACTGCGGCGTATCT
GCAACGCCGTGCATGCCACGGCCCTTGTGCGCATGGGTGCTCCCACCCCC
GACGAGATGGGGAGCTGCGCCCTGGTGGAGGTGCAGGAGGTGGGCCTTAG
GAAGGTGACCGTGTTCAGCCAAAATGATGATGACTCGCGCATCGCGACAA
TCGTGCTGAGAGCAAGCACGGAGTCATTGCTAAATGACCTTGAGCGCGCG
GTGGATGACAGCGTGGCGTGCGTTCGAGGCTTGTGCCGAGACCCTCGGTT
CGTGCCCGGTGCGGGCGCAACGGAGATGGAGCTGGCTCACCAGATCTCGA
AGTTCGGCGAGTCACAGGCGACACGGAGTCATTGCTAAATGACCTTGAGC
GCGCGGTGGATGACAGCGTGGCGTGCGTTCGAGGCTTGTGCCGAGACCCT
CGGTTCGTGCCCGGTGCGGGCGCAACGGAGATGGAGCTGGCTCACCAGAT
CTCGAAGTTCGGCGAGTCACAGGCGAGACTAGACCAGTACGCTATCAACA
AGTTCGCCGAAGCCCTGGAGGTCATCCCGCGCATTCTCTCTGAGACCTCT
GGCCATGACGCTGAGAAGGTAGACTAGACCAGTACGCTATCAACAAGTTC
GCCGAAGCCCTGGAGGTCATCCCGCGCATTCTCTCTGAGACCTCTGGCCA
TGACGCTGAGAAGGTA
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