mRNA_H-paniculata_contig22025.5826.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: D7G5G4_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G4_ECTSI) HSP 1 Score: 228 bits (582), Expect = 1.710e-73 Identity = 104/148 (70.27%), Postives = 120/148 (81.08%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKEDAMSGKGAWFP 444
SPWTITYRPFENNVHKI YAVLPLLALLRLVNPGPAGVA GV FL GSLMS E HR+AHM SPPP+ LQ +GV +SR EHGRHH SPFE+KYCIVTG CN LD FRF+ERV++++NGVEPI W+L+P++KE A++ W P
Sbjct: 78 SPWTITYRPFENNVHKIAYAVLPLLALLRLVNPGPAGVALGVAFLVGSLMSNEFHRFAHMTSPPPIVRALQKFGVTVSRKEHGRHHSSPFEEKYCIVTGVCNGPLDHFRVFRFMERVVYELNGVEPIAWKLDPSVKEVALAT--GWLP 223
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A6H5KFV9_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV9_9PHAE) HSP 1 Score: 230 bits (586), Expect = 5.920e-72 Identity = 105/148 (70.95%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKEDAMSGKGAWFP 444
SPWTITYRPFENNVHKI YAVLPLLALLRLVNPGPAGVA GVTFL GSLMS E HR+AHM SPPP+ LQ +GV +SR EHGRHH SPFE+KYCIVTG CN LD FRF+ERV++++NGVEPI W+L+P++KE A++ + W P
Sbjct: 243 SPWTITYRPFENNVHKIAYAVLPLLALLRLVNPGPAGVALGVTFLVGSLMSNEFHRFAHMTSPPPLVRALQKFGVTVSRKEHGRHHSSPFEEKYCIVTGICNGPLDHFRVFRFMERVVYELNGVEPIAWKLDPSVKEVALATR--WLP 388
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A835ZEB7_9STRA (Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB7_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.110e-56 Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLN 396
SPWTITYR F NNVHK+ Y VLPLL LL L +PGPAG FGV+ L G LM QELH+Y+HM+ PP A LQ G+I+S+ EHG HH SPFE KYCIVTG CN+I+D T +R LERV+++ GVEP CW+L+
Sbjct: 170 SPWTITYRNFANNVHKVAYGVLPLLGLLALSHPGPAGTMFGVSALMGLLMCQELHKYSHMVRPPQWVARLQQSGIILSKKEHGLHHTSPFEGKYCIVTGHCNEIMDSTNLYRHLERVVYERTGVEPNCWKLD 301
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A6S9FHC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FHC8_HETAK) HSP 1 Score: 156 bits (394), Expect = 3.690e-44 Identity = 69/141 (48.94%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKEDAMS 423
+PWTITYRPF NNVHKIC +P+ + + F V +L ++SQE H+ +HM++PP A VLQ+ VIISR HG HH SPFE YCI+TG CN LD++ FR LE+++++ NGVEP CW+L+P +K +A++
Sbjct: 167 APWTITYRPFANNVHKICKVAIPIALIANALPLALPAKLFTVLWLCFQVLSQEFHKLSHMVNPPAWAQVLQEKNVIISRKVHGLHHSSPFEGNYCILTGWCNQALDQSRLFRGLEKLVYEWNGVEPNCWKLDPKVKAEALA 307
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: K8YWU6_NANGC (Lipid_desat domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWU6_NANGC) HSP 1 Score: 145 bits (366), Expect = 1.430e-40 Identity = 66/131 (50.38%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLP-LLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQ 390
+PWTITYR F NNVHKI +P +LA++ L P F F ++SQE H+ +H+ PP A LQD G+IISR EHG+HH SPFE YCI+TG CN +LD++G FRFLE+ ++ + GV P CW+
Sbjct: 96 APWTITYRQFSNNVHKITKITIPAMLAVVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWK 226
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: W7U0R7_9STRA (Kua-ubiquitin conjugating enzyme hybrid, localization n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0R7_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.440e-39 Identity = 66/131 (50.38%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLP-LLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQ 390
+PWTITYR F NNVHKI +P +LA++ L P F F ++SQE H+ +H+ PP A LQD G+IISR EHG+HH SPFE YCI+TG CN +LD++G FRFLE+ ++ + GV P CW+
Sbjct: 208 APWTITYRQFSNNVHKITKITIPAMLAIVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWK 338
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A7S0DPI5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPI5_9EUKA) HSP 1 Score: 145 bits (367), Expect = 1.870e-39 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAF---GVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKEDAMSG 426
+PWTIT+RPF NNV+KI V+PL+AL+ + G A+ V F ++ QE H+ +HMI PP + LQ+ G+++S+ +H HH SPFE YCIVTG N +LD+T FR LERV++++ G EP CW+L P LKE + G
Sbjct: 229 APWTITFRPFLNNVYKIARVVVPLMALVVATSIGSGLWAWQIAAVVFFNMQILGQEFHKLSHMIKTPPTISKLQNSGILLSKRKHLAHHTSPFEGHYCIVTGHMNPLLDRTRFFRRLERVVYELGGAEPNCWKLKPELKEAVLKG 373
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A0G4GQ94_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ94_9ALVE) HSP 1 Score: 144 bits (364), Expect = 2.980e-39 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNPG-PAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKED 414
+PWTITYR FENN KICYA ++AL L+ G P F F +QE H+Y+HM +PP + LQD G+I+SR EHG+HH SPFE YCI+ G CN LD G FRFLER + + G EP W+L+ +L+E+
Sbjct: 204 APWTITYRDFENNTFKICYAAGAIVALSFLLLGGSPFWQTFWTVFAVSQAFAQEFHKYSHMTNPPALVRRLQDAGLILSRKEHGQHHNSPFEGHYCILFGFCNRPLDSIGFFRFLERRVVALGGHEPNSWKLDESLREE 342
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: A0A5J4YII5_PORPP (Fatty acid desaturase 4, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YII5_PORPP) HSP 1 Score: 138 bits (348), Expect = 4.600e-37 Identity = 66/139 (47.48%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKICYAVLPLLALLRLVNP--GPAGVAFGVTFLFGSLMSQELHRYAHMISPPPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKE 411
SPWTIT R NNVHK C LPLL L+ + N P + F F +MSQE+H++AHM+ PP + LQD V++SR HG HH SPFE YCIV G CN LD+ G FR +E F++NG P W L +L++
Sbjct: 193 SPWTITERGVFNNVHKACVPALPLLGLMAVCNSFIAPELMTFLNVFFVSVIMSQEIHKWAHMLHPPALVVALQDARVLLSRKVHGLHHNSPFEGNYCIVNGWCNQFLDRIGFFRKMELFFFKLNGAVPNTWLLEESLRQ 331
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Match: K0R1I4_THAOC (Lipid_desat domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1I4_THAOC) HSP 1 Score: 138 bits (348), Expect = 5.230e-37 Identity = 64/149 (42.95%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 1 SPWTITYRPFENNVHKIC--YAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMSQELHRYAHMISP--PPVAAVLQDWGVIISRLEHGRHHRSPFEDKYCIVTGACNDILDKTGAFRFLERVIFQMNGVEPICWQLNPALKEDAMSGKGA 435
+PWTI YR F NNV+K+C + + + A+ L F F + +MSQELH+++H P + VLQD G+ I R+ H +HH +PFE YCIV+G CN+ LD++G FR++E ++++NGVE W+L+P LKE +SGK A
Sbjct: 187 APWTIAYRGFCNNVYKLCIPFGIPTVAAINYLSGDNSMAALFFTFFCWIEIMSQELHKWSHQTKAEVPSIVNVLQDLGITIGRVPHAKHHTAPFEGNYCIVSGLCNETLDRSGFFRWMEHTVYKINGVESNAWKLDPELKERTLSGKYA 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22025.5826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22025.5826.1 >prot_H-paniculata_contig22025.5826.1 ID=prot_H-paniculata_contig22025.5826.1|Name=mRNA_H-paniculata_contig22025.5826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp SPWTITYRPFENNVHKICYAVLPLLALLRLVNPGPAGVAFGVTFLFGSLMback to top mRNA from alignment at H-paniculata_contig22025:1241..2813+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22025.5826.1 ID=mRNA_H-paniculata_contig22025.5826.1|Name=mRNA_H-paniculata_contig22025.5826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1573bp|location=Sequence derived from alignment at H-paniculata_contig22025:1241..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22025:1241..2813+ >mRNA_H-paniculata_contig22025.5826.1 ID=mRNA_H-paniculata_contig22025.5826.1|Name=mRNA_H-paniculata_contig22025.5826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig22025:1241..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |