mRNA_H-paniculata_contig22.5813.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE) HSP 1 Score: 263 bits (673), Expect = 7.520e-78 Identity = 189/406 (46.55%), Postives = 236/406 (58.13%), Query Frame = 1
Query: 478 TRAPRMYLGGLGHALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGS----------------GRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLI-AIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQF--ALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
TRAPR+YL G LHV Q V+L+ +Q Y+V+VMRLRDG+ VRVFDG++GEFLA V+ +ST S GR G+GKR S +G + VE LR+E LTR+QPG I G E+ + AP++ L+FAPIRKQRLK+LVEKAVE+GASRL PVLT RT+K D+S L +L + A+EAAEQCERM VP V S P+ L S L + SS L+S + G+A +D GDL+ LP ++FVCKER +APPLL+AL ++ A ER Q NSS D + +N A +GPEGGF P+EI A+A FVRFVSLG TVLRAETAA+YALS WSAFWAS
Sbjct: 141 TRAPRVYLNGAN--LHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKR-STVGADKVVE----LRVECLTRRQPG-----IGGGGDGEV---EDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDAS--MLDRLGAVTAVEAAEQCERMTVPPVAS-PVTLASYLRS-----------LELRQSSCDLSS---IIGLA---------------RDRGGDLS--------------------LPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSS-DGSRNANA----AFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 474
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI) HSP 1 Score: 232 bits (592), Expect = 4.100e-68 Identity = 164/371 (44.20%), Postives = 208/371 (56.06%), Query Frame = 1
Query: 580 MRLRDGNHVRVFDGISGEFLATVSGVASTGS--------------GRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLI-AIEAAEQCERMIVPRVESTPMPLVSLLNEWP-KHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQF--ALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
MRLRDGN VRVFDG++GEFLA V+ +S+ S GR G+GKR +G EK + LR+E LTR+QPG I G E+ + AP++ L+FAPIRKQRLK+LVEKAVE+GASRL PVLT RT+K D+S L +L + A+EAAEQCERM VP + S P+ L S L +H G+ + G+A +D G D LP ++FVCKER +APPLL+AL ++ A +R Q NSS+DN + + +A +GPEGGF P+EI +A FVRFVSLG TVLRAETAA+YALS WSAFWAS
Sbjct: 1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAG-----GAEKVIELRVECLTRRQPG-----IGGGGGGEV---EDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDAS--MLDRLGAVTAVEAAEQCERMTVPPMAS-PVTLASYLRSLELRHSSCDGS---------------SIVGLA---------------RDRDG--------------------DRSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDNRNAN-----AAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 300
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.210e-32 Identity = 117/355 (32.96%), Postives = 164/355 (46.20%), Query Frame = 1
Query: 580 MRLRDGNHVRVFDGISGEFLATVSGVASTGSGRN-GKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKS-GAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
MRLRDG+ VR F+G GE+L T+S + S + GKG+R + + +AL++E R Q S + DV L+ API++QR+K+LVEKA E+G + + PVLT T+++ AE +S +L IAIEAAEQCER+ +P + P PL LL W H + H T QL FVC+ER+ +PPLL+AL + R + +A VGPEGGF+ +E +A +++ VSLG TVLRAETAA+YALSC+S+F A+
Sbjct: 1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRR--------SAKPALALQVEQQLRSQAEDSCADL-----------------DVWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEALDAEGTS-----RLLPIAIEAAEQCERLSLPHLHP-PAPLPELLARW--HSEPH-------------------------------------------------------------TRARQL----FVCQERSPQSPPLLEALAAASAAR--------------GVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAA 243
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT) HSP 1 Score: 120 bits (300), Expect = 6.210e-27 Identity = 111/380 (29.21%), Postives = 155/380 (40.79%), Query Frame = 1
Query: 517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTR-KSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPP 1653
AL + V+LS +Q HY+ +V+RL G V +F+G GE+ A + + +R +G +L +E R Q + PD+ L+FAPI++ RL +LV+KAVE+G SRL+PVLT RT K D +L IEAAEQCERM +P + P P++ +L+++P G + + VC ER +A P+ LE E +R AI GPEGGFA E+ A SF+RFVSLGP +LRAETAA+ A++CW A R P
Sbjct: 16 ALDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETI-----------RRNAG-----------SLGVETQIRPQ---------------------ITEPDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRHRSNL-------IEAAEQCERMTLPEIVE-PRPILDVLSDFP----------------------------------------------------TGRR--------------------LLVCAERG-HAAPINQILEDDTGEADR--------------------CAILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQAALGDWRRRP 251
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: UPI0010745A2F (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI0010745A2F) HSP 1 Score: 117 bits (293), Expect = 5.050e-26 Identity = 107/382 (28.01%), Postives = 151/382 (39.53%), Query Frame = 1
Query: 517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIA--IEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR 1656
+L V +LS DQ HY+ NVMRL+ G+ V VF+G GE+L +S A +K +++ R+Q S PD+ML+FAPI+KQRL ++EKA E+G S PV+T RT S ++ RL A IEA+EQCER+ +P V + LV L+ +WP+ +FV E A P+L+ L++FA + I AI VGPEGGF P E+ +A V +S+GP +LRA+TAA+ A+SCW + P R
Sbjct: 9 SLSVGLSQDLSSDQAHYVNNVMRLKVGDEVAVFNGQDGEWLGQISS----------------------ARKKNCTIQLIEKIREQD---------------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSDFQPVITQRTIAS--------KIRSDRLCAQTIEASEQCERLNIPVVHEA-VSLVQLVKDWPQE------------------------------------------------------------------------RTLFVLNEHGG-AKPILEGLQEFAGKE-------------------IGPCAILVGPEGGFDPSELDLLAKLQNVVPLSIGPRILRADTAALAAISCWQSVLGDWQVPLR 246
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2E7V032_9RICK (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7V032_9RICK) HSP 1 Score: 116 bits (291), Expect = 1.130e-25 Identity = 107/389 (27.51%), Postives = 150/389 (38.56%), Query Frame = 1
Query: 505 GLGHALHVDQ------IVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPP 1653
G+ LHVDQ + LS +Q HY+ NV+RL V +F+G GE+LA + R ++ ++L + L R Q A P++ LMFAPI++ RL I+V+KAVE+G SRLIP+ T RT + +L + R +EAAEQCER+ +P + P + +L +P D C I VC ER +A P+ L++ R AI GPEGGF+ E+ A SF+RFVSLGP +LRAETA + A++CW R P
Sbjct: 6 GVRARLHVDQELDTGQFINLSGNQSHYLKNVLRLAPDAEVALFNGKDGEWLARID----------------------RVSQRSISLEVRRLLRAQ---------------------AVEPELWLMFAPIKRARLDIIVQKAVELGVSRLIPIFTERT------EVKRLNLVRHRANIVEAAEQCERLTLPEIVE-PRAIFDVLANFP----------------------------GDGC--------------------------------------------ILVCVERG-DADPIHKVLQEDLASVGRF--------------------AILCGPEGGFSDTELDAFGKLSFIRFVSLGPRILRAETAVISAVTCWQVTLGDWRRRP 251
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A1C3RIS7_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Candidatus Terasakiella magnetica TaxID=1867952 RepID=A0A1C3RIS7_9PROT) HSP 1 Score: 114 bits (284), Expect = 8.940e-25 Identity = 103/377 (27.32%), Postives = 148/377 (39.26%), Query Frame = 1
Query: 529 DQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRV-ESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR 1656
D ++EL DQ HY+ NVMRL+ G+ + +F+G GE+ AT++ +A +K L++ TR+Q S PD+ML+FAPI+KQRL ++EKA E+G SR PV+T RT S +L IEA+EQCER+ +P V E+ +P L+ +W K D T+ FV E + P +L+ L+QF A VGPEGGF P E+ + V +S+GP +LRA+TAA+ A+SCW + P R
Sbjct: 16 DGLIELPSDQAHYVNNVMRLKVGDKLALFNGREGEWSATIT----------------------QARKKNCTLQVGKKTRQQE---------------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSRFQPVITKRTIVSKIRTD------RLHAQTIEASEQCERLNIPEVLEAVSLP--QLIQDWSK------------------------------------------------DRTL------------------------FVLNEHGGSKP-ILEGLQQFV-------------------GKSCGPCAFLVGPEGGFDPSELDLLEKLQNVVPLSVGPRILRADTAALAAISCWQSVLGDWQAPLR 249
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2Z4UFE5_9HYPH (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UFE5_9HYPH) HSP 1 Score: 112 bits (281), Expect = 3.240e-24 Identity = 107/370 (28.92%), Postives = 155/370 (41.89%), Query Frame = 1
Query: 505 GLGHALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALS 1614
GLG L V ++DQ+HY++NVMRL DG+HVR+F+G GE+L + V K+RS + + +E TR+Q PD+ L+FAP+++ RL +V+KAVE+GA RL+PV T RT + + +LR A+EAAEQC + VP VE P L +LLN+W SA + G + + D+A A+ EQL ++ A+A PL AI +GPEGGF+P E + +SLGP ++RA+TAA+ AL+
Sbjct: 33 GLGEGLGVVP----NRDQIHYLLNVMRLSDGDHVRLFNGRDGEWLGRLDEV-----------KKRSCL-----------IALEKKTREQD---------------------VLPDIWLLFAPVKRARLDFMVQKAVEMGAGRLLPVNTARTNVARIKQD------RLRANAVEAAEQCGLLSVPEVEE-PQSLGALLNDW----------------SADMG---------------------------------GRRIIFCDEAAPKASTLEQLQNLVGA----GASAGPL----------------------------------AILIGPEGGFSPAEREQLLNRDDTHAISLGPRIMRADTAAVAALA 261
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A7Y7D3H1_9HYPH (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A7Y7D3H1_9HYPH) HSP 1 Score: 112 bits (279), Expect = 3.860e-24 Identity = 99/381 (25.98%), Postives = 143/381 (37.53%), Query Frame = 1
Query: 529 DQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR*HLGD 1671
D+ +ELS DQ HYI NVMRL G+ V +F+ + GE+ AT+ + +K+ L++ TR T PD+ L FAPI+KQRL ++EKA E+G S L PV+T T S +L AIEA+EQCER+ +P V+ + L L+ +WP++ + +FV ER P ++Q + H A GPEGGF E+ + FV +SLGP +LRA+TAA+ A+SCW + +P R G+
Sbjct: 16 DKQIELSSDQAHYINNVMRLNVGDEVLLFNALDGEWAATIQ----------------------ESKKKRCVLQVGSKTR---------------------DTEKMPDLWLCFAPIKKQRLDFIIEKATELGVSCLQPVITRHTIVSKIRTD------RLHAQAIEASEQCERLNIPDVKEA-VSLTQLIKDWPENRR------------------------------------------------------------------------LFVLDERGGAEP-----IDQALRTHKDGPH------------------AFLTGPEGGFEASELDLLRKLPFVTPISLGPRILRADTAALAAISCWQSVCGDWQKPLRNRFGE 251
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A516H2H2_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Ferrovibrio terrae TaxID=2594003 RepID=A0A516H2H2_9PROT) HSP 1 Score: 110 bits (275), Expect = 1.040e-23 Identity = 109/366 (29.78%), Postives = 148/366 (40.44%), Query Frame = 1
Query: 517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALS 1614
AL V L DQ HY+ +V+RL+ G V +F+G GEF A ++ A +K V L + R QP S+A DV L FAPI++ R++++VEKA E+ A RL+PV+T RT+ + ++L A EAAEQCER+ VP V + + L LL +WP+ D QL F+C ER+ +AP LL A + A+ VGPEGGFAPEE+ +AA S V VSLGP +LRAETAA+ AL+
Sbjct: 14 ALSAGGSVMLPDDQAHYLRHVLRLQPGEAVALFNGRDGEFRAVIA----------------------EAGKKGVRLDLAAQLRPQPASTA--------------------DVWLCFAPIKQGRIEMIVEKATELDAGRLLPVITRRTQMQKV------NAERLAAHAREAAEQCERLDVPEV-APAVTLEKLLQDWPQ--------------------------------------------------------------------DRQL----FLCAERS-DAPSLLAAAKGRGP------------------------CALLVGPEGGFAPEELDRLAALSQVVTVSLGPRILRAETAAIAALA 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22.5813.1 >prot_H-paniculata_contig22.5813.1 ID=prot_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=443bp MRYVDNHLHQQAESSGDYPEEFLPKKKRPSPFLGLDIADSEHSSNCGVETback to top mRNA from alignment at H-paniculata_contig22:14774..17596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22.5813.1 ID=mRNA_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2823bp|location=Sequence derived from alignment at H-paniculata_contig22:14774..17596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22:14774..17596+ >mRNA_H-paniculata_contig22.5813.1 ID=mRNA_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2658bp|location=Sequence derived from alignment at H-paniculata_contig22:14774..17596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |