mRNA_H-paniculata_contig21927.5790.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21927.5790.1
Unique NamemRNA_H-paniculata_contig21927.5790.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: D8LGT1_ECTSI (RRM domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT1_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 4.550e-105
Identity = 162/198 (81.82%), Postives = 180/198 (90.91%), Query Frame = 1 
Query:  928 RAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCFRADPKDLEAGARDWLNDEK 1521
            R++ P IVFVGQLAFSTTA+ +E+H R RGG+EG ISVRLLT KGTNPP+S+GMAF++V+DAE+AYQCL LHHSRLDGRLLNVER+SGGGK  KG RI+E R EQKEFMKSVVQRVL EFI AGRLGK ELD+ A+GVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCFR+DP+ LEAGARDWLNDEK
Sbjct:  175 RSRNPFIVFVGQLAFSTTAERVEEHFRTRGGIEGNISVRLLTRKGTNPPKSRGMAFLQVDDAESAYQCLSLHHSRLDGRLLNVERTSGGGKERKGERIQEKRGEQKEFMKSVVQRVLGEFITAGRLGKTELDEAAQGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCFRSDPETLEAGARDWLNDEK 372
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A6H5KAW2_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW2_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.190e-101
Identity = 158/196 (80.61%), Postives = 177/196 (90.31%), Query Frame = 1 
Query:  934 QTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCFRADPKDLEAGARDWLNDEK 1521
            + P IVFVGQLAFSTTA+ +E+H R RGG+EG ISVRLLT KGTNPP+S+GMAF++V+DAE+AYQCL LHHSRLDGRLLNVER+SGGGK  KG RI+E R +QKEFMKSVVQRVL EFI AGRLGK ELD+ A+GVLEKMEAKVMERAVKDYCDKPDRLEL NPSAWFTHHAHELCFR+DP+ LEAGARDWL+DEK
Sbjct:  192 RNPFIVFVGQLAFSTTAERVEEHFRTRGGIEGNISVRLLTRKGTNPPQSRGMAFLQVDDAESAYQCLSLHHSRLDGRLLNVERTSGGGKEKKGERIQEKRGQQKEFMKSVVQRVLGEFITAGRLGKTELDEAAQGVLEKMEAKVMERAVKDYCDKPDRLELHNPSAWFTHHAHELCFRSDPETLEAGARDWLDDEK 387
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A836CEL8_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.490e-48
Identity = 101/184 (54.89%), Postives = 124/184 (67.39%), Query Frame = 1 
Query:  919 RSKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPP--RSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCF 1464
            R+ +   P +VFVGQL+F TT   +E+H RKRGGVEG + VRLLT    NP   RS+GMAFVE E  ET YQCL LHH+RLDGR+LNVER+SGG   A   +I   R+EQK  MK  V R++ EFI  G L + ELD  A  VLEK E KV+E+A+ DYC KPD+  L+N SA+F H  H + F
Sbjct:  159 RTGKKAAPLVVFVGQLSFKTTEAEVEEHFRKRGGVEGELKVRLLT----NPTNGRSRGMAFVETESPETLYQCLTLHHTRLDGRILNVERTSGGKGDAHKQKISSLREEQKAHMKDTVARIMGEFIAKGLLKEGELDVDAVRVLEKFEGKVVEKALSDYCVKPDKATLRNKSAYFVHITHGIAF 338
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A4D9D4A6_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4A6_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.110e-31
Identity = 80/175 (45.71%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:  916 KRSKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGK-GAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWF 1437
            KR +  + PHIVFVGQL+F T+A  L +HL K GGV G I VRLLT KG+N  +S+G AFV + DAE  Y+CL LHHS+L  R++NVERS GG     +  +++  R EQ+E +++   R+++E I+AG L   ELD+ A  +L + +       ++ YC + DR  L+NPSA+F
Sbjct:  126 KRRRIHENPHIVFVGQLSFDTSAHELREHLEK-GGVTGPIHVRLLTEKGSN--KSRGQAFVTLIDAENQYKCLSLHHSKLKNRVINVERSCGGRNLDKRKGKLQALRGEQREAIEATCDRIVKEKIEAGELLPGELDEQAVKLLTRYDGHTAVGILEAYCAE-DRARLRNPSAYF 296
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A7S1TQR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQR3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.830e-29
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = 1 
Query:  916 KRSKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGAKGAR---IKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKP---DRLELQNPSAWFTH 1443
            +R +R   P IVFVGQL++ TTA+ L+ H     GVEG I+VRL T   T   RS+GMAFVE++  E  ++CL LHH+ LDGR +NVE+S+G G  A GAR   +K+ R  Q+E +   V R++ E ++A +L + E+D+    +L + E +++E A+  +C +    DR  + NPSA  TH
Sbjct:   13 RRGRR--NPCIVFVGQLSYRTTAEQLKKHFAA-AGVEGNIAVRLRTDPKTK--RSRGMAFVELDTPEALHECLKLHHTMLDGRNINVEKSAGRGGRATGARATKLKDQRAAQQETIDGAVARMVDERVEAKKLARGEIDERCIALLSRFEGRIVELALDAFCMRGAPGDRGGIANPSAMVTH 189
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A7S3XJ31_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJ31_HETAK)

HSP 1 Score: 127 bits (319), Expect = 8.890e-29
Identity = 89/230 (38.70%), Postives = 129/230 (56.09%), Query Frame = 1 
Query:  784 TATTAKDRRLLRRQEERQXXXXEEGGXTGTGRAGAGGSAGHPAAKRSKRAQT----PHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGAKGA-RIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHEL 1458
            T   AK RRL +RQ ER+      G  T   + G GG+       + K A+     P+IVFVGQL F TT++ +EDH R    + G I VRLLT K T  P  KGMAFVEV +    Y+CL LHHS L+ R +NVE+S GG    K   +I E + +Q++ +++ V+R+L+EF D G + + E ++     L   E  ++E A+K Y D+ D+ ++QN +A       +L
Sbjct:   16 TKMNAKQRRLAKRQAERESLSTSPG-RTNLQQQGVGGNKLTERTDKKKNAKKTKKIPNIVFVGQLDFKTTSKQIEDHFRAHD-IHGFIKVRLLTDKVTKKP--KGMAFVEVSNPTEMYKCLKLHHSSLNRRRINVEKSCGGKNTDKRKEKINELKQKQRQAVETTVKRILKEFTDRGDISETEFNETLMERLVSYEGTIVEEALKKYVDE-DKEKVQNRTALLVSLVRDL 240
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A6V2LJ41_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LJ41_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.650e-26
Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 1 
Query:  922 SKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVE----GRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKG--AKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTH 1443
            S+  + P IVF+GQL+++TT   +  H +   G +      +S+RLLT   T   +S+GMAF+E  D E  Y CL LHH+ LDGR +NVERS+GG KG  A+  ++K  R EQ+E++   V ++L+++   G L ++ELDD    + ++    V+  A+ +Y +      ++NPSA+ TH
Sbjct:   35 SEAKKDPCIVFIGQLSYTTTKDQIFQHFQNELGSDVVTPDTLSIRLLT-DPTKNNKSRGMAFIETTDPELMYNCLKLHHTHLDGRRINVERSAGGNKGSEARQNKLKRYRTEQEEYLSETVNKILEDYKAQGDLNESELDDGVIALCKRHSPHVVSAALSEYVEARGG-HMENPSAYLTH 212
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: A0A7S4JM15_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JM15_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.850e-26
Identity = 71/187 (37.97%), Postives = 114/187 (60.96%), Query Frame = 1 
Query:  913 AKRSKRA---QTPHIVFVGQLAFSTTAQALEDHLRKRGG------VEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGA--KGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEAKVMERAVKDYCDKPDRLELQNPSAWFT 1440
            AKRSK+     +P+++F+GQL++ TT + L  H ++  G       E  + +RLLT   T   RS+G+AFVE ED ET Y CL LHH+ LDGR +NVERS+GG K +  +  +I + R EQ+E+M   + +++ +F   G + + ELD+    ++++  A ++E A+ +Y ++     L NPSA+ T
Sbjct:  221 AKRSKKRAKKSSPYVLFIGQLSYHTTKEGLFRHFQRELGKDKKEITEETLRIRLLTDSKTG--RSRGLAFVETEDPETMYACLQLHHTTLDGRCINVERSAGGKKESETRKGKITQYRKEQEEYMSGTIDKIIADFQSRGDISEGELDEGVVALMKRNSAALVETALAEYVEERGE-SLDNPSAYLT 404
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: W7TH40_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH40_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.000e-25
Identity = 66/138 (47.83%), Postives = 94/138 (68.12%), Query Frame = 1 
Query:  934 QTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISVRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGK-GAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVL 1344
            + PHIVFVGQL+F T+A  L +HL + GGV G I VRLLT KG+N  +S+G AFV + DAE  Y+CL LHHS+L  R++NVERS GG     +  +++  R EQ+E +++   R+++E  +AG+L   ELD+ A  +L
Sbjct:  130 ENPHIVFVGQLSFDTSAHELREHL-ENGGVTGPIHVRLLTEKGSN--KSRGQAFVTLIDAENQYKCLSLHHSKLKNRVINVERSCGGRNLDKRKGKLQALRREQREAIETTCDRIVKEKTEAGQLLPGELDEQAVKLL 264
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BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Match: B7FSS2_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSS2_PHATC)

HSP 1 Score: 115 bits (287), Expect = 4.940e-25
Identity = 82/204 (40.20%), Postives = 117/204 (57.35%), Query Frame = 1 
Query:  775 DANTATTAKDRRLLRRQEERQXXXXEEGGXTGTGRAG--AGGSAGHPAAKRSKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRIS-----VRLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSGGGKGA--KGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGVLEKMEA 1359
            +  T TTAKDRR  +R+ E      E  G T T          A  P A  SK    P+IVFVGQL++ TT  +L  H+RK  G E +++     +RLLT   T   +S+GMAFVEV D E  Y CL LHH+ L+GR LNVER++GG K +  +  +I++ R EQ+++  +VV  +LQE   +G +  +E+DD   G+ ++  A
Sbjct:   90 EQRTDTTAKDRRSAKRKAE--AIAAEAAGCTATELLAWYEQHGANDPDAAASK---IPYIVFVGQLSYDTTKDSLFQHIRKEIGTEHKVNPSTVKIRLLTDAKTK--KSRGMAFVEVPDPEMLYACLKLHHTFLEGRRLNVERTAGGRKSSDQRKTKIQQRRQEQEQYFGTVVDNMLQEHYKSGEIKPHEIDDGVVGLCKRHSA 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21927.5790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGT1_ECTSI4.550e-10581.82RRM domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A6H5KAW2_9PHAE1.190e-10180.61RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CEL8_9STRA4.490e-4854.89RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D4A6_9STRA1.110e-3145.71RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S1TQR3_9STRA4.830e-2942.31Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3XJ31_HETAK8.890e-2938.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V2LJ41_9STRA4.650e-2637.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4JM15_9STRA4.850e-2637.97Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
W7TH40_9STRA1.000e-2547.83RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
B7FSS2_PHATC4.940e-2540.20Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21927contigH-paniculata_contig21927:190..4306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.0
Seed ortholog evalue1.1e-88
Seed eggNOG ortholog2880.D8LGT1
KEGG koko:K11294
KEGG Pathwayko05130,map05130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA recognition motif
EggNOG OGs2CYJU@1,2S4U0@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-07_005150.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036
Exons4
Model size1522
Cds size1380
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21927.5790.1prot_H-paniculata_contig21927.5790.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21927 331..4306 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929598.5147152-UTR-H-paniculata_contig21927:189..3301622929598.5147152-UTR-H-paniculata_contig21927:189..330Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21927 190..330 +
1691480930.113641-UTR-H-paniculata_contig21927:189..3301691480930.113641-UTR-H-paniculata_contig21927:189..330Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21927 190..330 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929598.5354695-CDS-H-paniculata_contig21927:330..12901622929598.5354695-CDS-H-paniculata_contig21927:330..1290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 331..1290 +
1691480930.129313-CDS-H-paniculata_contig21927:330..12901691480930.129313-CDS-H-paniculata_contig21927:330..1290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 331..1290 +
1622929598.5490184-CDS-H-paniculata_contig21927:1637..17361622929598.5490184-CDS-H-paniculata_contig21927:1637..1736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 1638..1736 +
1691480930.138286-CDS-H-paniculata_contig21927:1637..17361691480930.138286-CDS-H-paniculata_contig21927:1637..1736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 1638..1736 +
1622929598.5653896-CDS-H-paniculata_contig21927:2280..24421622929598.5653896-CDS-H-paniculata_contig21927:2280..2442Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 2281..2442 +
1691480930.1465673-CDS-H-paniculata_contig21927:2280..24421691480930.1465673-CDS-H-paniculata_contig21927:2280..2442Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 2281..2442 +
1622929598.5811307-CDS-H-paniculata_contig21927:4147..43061622929598.5811307-CDS-H-paniculata_contig21927:4147..4306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 4148..4306 +
1691480930.1557288-CDS-H-paniculata_contig21927:4147..43061691480930.1557288-CDS-H-paniculata_contig21927:4147..4306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21927 4148..4306 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21927.5790.1

>prot_H-paniculata_contig21927.5790.1 ID=prot_H-paniculata_contig21927.5790.1|Name=mRNA_H-paniculata_contig21927.5790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp
MVVMSEALATFSSTSHIESPAARISTESVGSNAKERRAARRAAAAAAAAE
EEEITPAGSSITLKIESSPAATFAITTPVMNAKERRAARRKAEQALSGDG
SGGGTPANPSTAETPAPAPAPAADLSSMTAKERRKAKRAAERMPSITITI
PSSLTPTAVSTSEEAGAGAGAGAGSTAKERRAAKRAAAREVREGTGSSGS
RMATAPVDCGQDANTATTAKDRRLLRRQEERQKREREEGGGTGTGRAGAG
GSAGHPAAKRSKRAQTPHIVFVGQLAFSTTAQALEDHLRKRGGVEGRISV
RLLTMKGTNPPRSKGMAFVEVEDAETAYQCLGLHHSRLDGRLLNVERSSG
GGKGAKGARIKETRDEQKEFMKSVVQRVLQEFIDAGRLGKNELDDVAKGV
LEKMEAKVMERAVKDYCDKPDRLELQNPSAWFTHHAHELCFRADPKDLEA
GARDWLNDEK
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mRNA from alignment at H-paniculata_contig21927:190..4306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21927.5790.1 ID=mRNA_H-paniculata_contig21927.5790.1|Name=mRNA_H-paniculata_contig21927.5790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4117bp|location=Sequence derived from alignment at H-paniculata_contig21927:190..4306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGAAGGCCCCTAAGGGCTGTGGCAGTACCACAGGCTTGGGGCTCTCTC
GCTCGCTGCCCGCTATCCTTGGCAAAGGACCTCTACTAGGTTTGATTGCG
ACGAAGCTCAGATCACGCTCAGCAATAAGAGCTACCACACGATGGTCGTG
ATGAGCGAAGCGCTGGCCACATTTTCCTCCACAAGTCACATCGAAAGCCC
TGCGGCTAGAATCTCTACCGAGAGTGTCGGATCGAACGCGAAGGAGAGGC
GGGCTGCTCGGCGAGCAGCAGCAGCAGCAGCAGCAGCAGAAGAAGAAGAG
ATCACTCCTGCTGGATCATCAATCACCCTGAAAATCGAATCATCTCCTGC
CGCAACCTTCGCGATCACCACGCCGGTCATGAATGCTAAGGAGCGTCGTG
CAGCCAGACGAAAAGCTGAGCAAGCGCTGTCCGGCGACGGCAGTGGTGGT
GGCACACCGGCCAACCCCTCCACCGCTGAAACACCAGCACCAGCACCGGC
ACCAGCAGCTGACCTTTCATCGATGACTGCCAAGGAACGTCGGAAAGCAA
AGCGAGCGGCGGAAAGGATGCCCTCGATAACAATCACAATCCCATCTTCA
TTAACGCCGACAGCAGTCAGCACCAGCGAAGAGGCTGGCGCAGGCGCAGG
CGCAGGCGCAGGCTCTACCGCGAAGGAGCGCCGGGCGGCCAAGCGCGCGG
CGGCCCGTGAAGTACGCGAGGGGACCGGTTCTTCTGGCTCAAGGATGGCC
ACGGCGCCGGTCGATTGTGGGCAAGATGCCAACACTGCCACAACCGCCAA
AGACCGGAGATTGCTACGGAGACAGGAGGAGCGTCAAAAGCGCGAGAGAG
AAGAGGGTGGTGGAACTGGTACGGGCCGCGCCGGCGCCGGCGGCAGTGCA
GGCCACCCGGCCGCCAAACGAAGCAAAAGAGCGCAGACGCCGCACATTGT
ATTCGTTGGCCAGTTGGCATTTTCGACCACCGCCCAAGCGCTCGAGGATC
ACTTGAGGAAGAGGGGCGGGGTAGAGGGCAGGATCTCCGTGCGGTTGCTG
ACAATGAAAGGCACCAATCCGCCGCGGTCAAAAGGCATGGCGTTCGTAGA
GGCAAGCTCGACTTTACGTTTTGTCGTGTGCATGAATTGCGATGTTATGT
TCTGTAAGAGATGCAGGTGTATGTGATGCCCTCATAGTGGTGCCTTGTGT
TTAGTCCTATGTTTTATCCGATTGCCCGTTTACGCACGTACTTCCTGCTG
CACTGACCTCACCCTGAATAGTTCATCTACGATGGGACGAGCTGGCAGAT
GTATGCTAATCTACAGACCATCTCAAGCTGTGGAGCTATCGATTGTGGTA
AGTGTTTCGTGCCACCTCCACATGGTCTCTGTTCTTTGTTGATTTTGTTG
TCATGTCGCTTGCCCTGTGTCCGAAACTGGGGATCTTGTAATGTGCAGGT
GGAAGATGCGGAGACCGCGTACCAGTGTCTAGGCCTTCACCATAGTCGCC
TGGACGGCAGGTTGCTTAACGTGGAGCGGAGCAGCGGTGGGGGCAAGGTG
CGGGCTACTTGGCGAATTCTCTCCGCGCCTCGTTGACTCATTTCTCAAAG
CCGGAGGACACTCCAAATTTTGAAATATAGGTTCATATTTGGTCAAGAGA
GTGATGACATATCGTAACCGACTGAAGGAAAACAACCGACTAGCCTACGA
GGAGGCGTTACTCTCGAAACAGCAGGGTTTTAGTCGTGCTTTTTATTGGG
TCGGCGAACTTCTACAATCCTGGAAAATAGGGCACGACGCAAGGCGGAAT
AACACTTTGGTGTGTCGTTCATGTTGATGGTGCTCGCAAGTCAGCGCGCC
GCGACTAAGTTTATTTAGATTATACGTTTGTCAATCAGTGAAGGTATCAC
GATACGGAGGTACAAACGGCATCTGTTCCGAAATACCATCGGATTGCTGC
AAAAACAAATTGCCAAGATTACGAGATTGTTGGGGCACCACGGAAAATTG
CCGATGACATGAATTTTGCCGTTGTTTTCAAGAGACGTGCCAGCTGCTAA
GACCAAAAGCGTTGGCTAATTGTCCGCCGCTGACACACCAGGGAGCGAAG
GGCGCGCGTATCAAGGAGACGCGGGACGAACAGAAGGAGTTCATGAAGAG
CGTGGTTCAGCGCGTTCTACAGGAGTTCATAGATGCTGGCAGGCTGGGTA
AAAATGAACTCGACGATGTAGCCAAGGGGGTGTTGGAGAAAATGGAGGCT
AAGGTGAGAAGCTTCAAGAGCAGTGAAGGACGGGCGCGGGGGGGGGGGCA
TGATGATCGATGGAAACGTTATCATGTGGGTAACCAAATGTCAGGCGGGG
GGCGTTAACGCGATCTATCGCTTAAGAAACGTCCCCTCTGAGTAATTGTG
GTCGAGTCTGTATTAGTTGTATATATCAACCACTAAAATAAACGCAGCTT
CCATGCAGCGTTGTTCGTGATAACTGGTACTCGAATTAGGACCTAGGGCG
GGGAGTAATCGCGAAGTATTGTTTGAAGTATTGCTTTGGTTGCGGCAAAA
GCCCTTCCATGGTCTGCAACAGATCGTTTGCGTCGGGGGGTGGCATTGAG
AAGAGAAACGCCACCGCCCTTGTTGTTCCGATGTCCCTCAGGGTAACTCG
ATCTTGTGCGCGCGATGTCTCCAGCAGAGCCTCCGTTGTGGTTTGTTTCT
AAATCAATTTGGTTCAAGCTCTGTAAATTAGCAACATACACATATTTTAC
GTAGTAAAATCGCTCATTAATCTAAACATCATTGCTCCACCCTTCATCCC
TTGCAGTCTTGATAGCGTACAACCTCATTCATTGCGAAATAGTAGGGCGG
AACACCTGTTCTGCAGTTGAATCTGTCGAGCACTTGTGCCCATAACCAAC
CGGTTGATGGATGGGTCACGGTGATCGATTGGCCCAGCCCGTGGCACCCG
GTGGTGACCGCCTAGTAATGTCCTACCGCAATATCCTAAACGGCAACAGT
ATTTTTCCTAACCGCCATGCAACGTAATCCATACCTTGCCGTAGTATCAA
TTGAGTAAAGCAAAACTTGATTGTCGCGAAAAGCAATGTACTACCGTGAA
AAACCTATCCCGCATACCTATCCATGACGAGCAGGCGCTGGTGTGTAAGA
TAAGGTAGCCCAGAAATAGTTTGGCCGGTGGTTACTTCCTCTGTTTTGTT
TGACAGGTTATATCTCCAGATTTAAGACTGTCCAGAGACTACGATTGGAA
TCGTTGGAACCATTTTCGAGCTGCTTACCGATTTGTGTATCAGGATTAAT
GACCGCTCAACGTCGGGCTAATTTGAACCATTTTCACTTCTTTTTTTTCC
AATTTTTACGCTTTTCCATTTTGAAAATACGAATGGAGGCACCTTATGGC
CTTTCTTCAGCCCGCATTTTTTTTGCGCCGCGCGCGCCCTCGATGGATTT
CGCCAAATTCCGTGATATTTTGGGGATCAATCTCAAAAATATGTGATAAT
AACTGAGAGAAAAAACGCAAATGGTTACGTGCTCCTATAAACTCAACCGA
CTTCACTTATGACACAGGAAGTACAAATTTAACACCTGTCCAGTAGTAGT
AGTTGACTTGCCCGGTTAGACTGCTGCCGGTGGTTTTTTGGCCCAAGTCG
CTATCGTAACTGGCAAGGCCAGTCACATGAGCGGGTCGCGGCAGACAGGC
GCGAAATCCGAAAAATACCCCCTCTCCCTCTGTCGAGGACGCCTGTTCAA
TTGTCTAATAACTGAATTTTACGGTATGCAAGACATGAGTTCACCCCCTC
CGCCCTCCGATCTTTCGATAACCAGCACCGCGCTTGAATGATAATGTTGT
GATTTTGCTGCTTTTCGGTTTGCCTTCGGACCCCTGGTCTTTCTTTGTGC
CTGCCGCGTGCCGCCTCGCAAAAAATACATCCGAAAAAAACATCACGACA
ACGACCAGGTGATGGAGCGGGCAGTGAAAGACTACTGTGACAAGCCGGAC
CGCCTGGAACTCCAAAACCCCTCGGCTTGGTTTACCCATCACGCGCACGA
ACTCTGCTTCCGAGCCGACCCCAAAGACCTAGAGGCCGGTGCGCGGGACT
GGCTAAACGACGAAAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig21927:190..4306+

>mRNA_H-paniculata_contig21927.5790.1 ID=mRNA_H-paniculata_contig21927.5790.1|Name=mRNA_H-paniculata_contig21927.5790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at H-paniculata_contig21927:190..4306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGTGATGAGCGAAGCGCTGGCCACATTTTCCTCCACAAGTCACAT
CGAAAGCCCTGCGGCTAGAATCTCTACCGAGAGTGTCGGATCGAACGCGA
AGGAGAGGCGGGCTGCTCGGCGAGCAGCAGCAGCAGCAGCAGCAGCAGAA
GAAGAAGAGATCACTCCTGCTGGATCATCAATCACCCTGAAAATCGAATC
ATCTCCTGCCGCAACCTTCGCGATCACCACGCCGGTCATGAATGCTAAGG
AGCGTCGTGCAGCCAGACGAAAAGCTGAGCAAGCGCTGTCCGGCGACGGC
AGTGGTGGTGGCACACCGGCCAACCCCTCCACCGCTGAAACACCAGCACC
AGCACCGGCACCAGCAGCTGACCTTTCATCGATGACTGCCAAGGAACGTC
GGAAAGCAAAGCGAGCGGCGGAAAGGATGCCCTCGATAACAATCACAATC
CCATCTTCATTAACGCCGACAGCAGTCAGCACCAGCGAAGAGGCTGGCGC
AGGCGCAGGCGCAGGCGCAGGCTCTACCGCGAAGGAGCGCCGGGCGGCCA
AGCGCGCGGCGGCCCGTGAAGTACGCGAGGGGACCGGTTCTTCTGGCTCA
AGGATGGCCACGGCGCCGGTCGATTGTGGGCAAGATGCCAACACTGCCAC
AACCGCCAAAGACCGGAGATTGCTACGGAGACAGGAGGAGCGTCAAAAGC
GCGAGAGAGAAGAGGGTGGTGGAACTGGTACGGGCCGCGCCGGCGCCGGC
GGCAGTGCAGGCCACCCGGCCGCCAAACGAAGCAAAAGAGCGCAGACGCC
GCACATTGTATTCGTTGGCCAGTTGGCATTTTCGACCACCGCCCAAGCGC
TCGAGGATCACTTGAGGAAGAGGGGCGGGGTAGAGGGCAGGATCTCCGTG
CGGTTGCTGACAATGAAAGGCACCAATCCGCCGCGGTCAAAAGGCATGGC
GTTCGTAGAGATGGTCGTGATGAGCGAAGCGCTGGCCACATTTTCCTCCA
CAAGTCACATCGAAAGCCCTGCGGCTAGAATCTCTACCGAGAGTGTCGGA
TCGAACGCGAAGGAGAGGCGGGCTGCTCGGCGAGCAGCAGCAGCAGCAGC
AGCAGCAGAAGAAGAAGAGATCACTCCTGCTGGATCATCAATCACCCTGA
AAATCGAATCATCTCCTGCCGCAACCTTCGCGATCACCACGCCGGTCATG
AATGCTAAGGAGCGTCGTGCAGCCAGACGAAAAGCTGAGCAAGCGCTGTC
CGGCGACGGCAGTGGTGGTGGCACACCGGCCAACCCCTCCACCGCTGAAA
CACCAGCACCAGCACCGGCACCAGCAGCTGACCTTTCATCGATGACTGCC
AAGGAACGTCGGAAAGCAAAGCGAGCGGCGGAAAGGATGCCCTCGATAAC
AATCACAATCCCATCTTCATTAACGCCGACAGCAGTCAGCACCAGCGAAG
AGGCTGGCGCAGGCGCAGGCGCAGGCGCAGGCTCTACCGCGAAGGAGCGC
CGGGCGGCCAAGCGCGCGGCGGCCCGTGAAGTACGCGAGGGGACCGGTTC
TTCTGGCTCAAGGATGGCCACGGCGCCGGTCGATTGTGGGCAAGATGCCA
ACACTGCCACAACCGCCAAAGACCGGAGATTGCTACGGAGACAGGAGGAG
CGTCAAAAGCGCGAGAGAGAAGAGGGTGGTGGAACTGGTACGGGCCGCGC
CGGCGCCGGCGGCAGTGCAGGCCACCCGGCCGCCAAACGAAGCAAAAGAG
CGCAGACGCCGCACATTGTATTCGTTGGCCAGTTGGCATTTTCGACCACC
GCCCAAGCGCTCGAGGATCACTTGAGGAAGAGGGGCGGGGTAGAGGGCAG
GATCTCCGTGCGGTTGCTGACAATGAAAGGCACCAATCCGCCGCGGTCAA
AAGGCATGGCGTTCGTAGAGGTGGAAGATGCGGAGACCGCGTACCAGTGT
CTAGGCCTTCACCATAGTCGCCTGGACGGCAGGTTGCTTAACGTGGAGCG
GAGCAGCGGTGGGGGCAAGGTGGAAGATGCGGAGACCGCGTACCAGTGTC
TAGGCCTTCACCATAGTCGCCTGGACGGCAGGTTGCTTAACGTGGAGCGG
AGCAGCGGTGGGGGCAAGGGAGCGAAGGGCGCGCGTATCAAGGAGACGCG
GGACGAACAGAAGGAGTTCATGAAGAGCGTGGTTCAGCGCGTTCTACAGG
AGTTCATAGATGCTGGCAGGCTGGGTAAAAATGAACTCGACGATGTAGCC
AAGGGGGTGTTGGAGAAAATGGAGGCTAAGGGAGCGAAGGGCGCGCGTAT
CAAGGAGACGCGGGACGAACAGAAGGAGTTCATGAAGAGCGTGGTTCAGC
GCGTTCTACAGGAGTTCATAGATGCTGGCAGGCTGGGTAAAAATGAACTC
GACGATGTAGCCAAGGGGGTGTTGGAGAAAATGGAGGCTAAGGTGATGGA
GCGGGCAGTGAAAGACTACTGTGACAAGCCGGACCGCCTGGAACTCCAAA
ACCCCTCGGCTTGGTTTACCCATCACGCGCACGAACTCTGCTTCCGAGCC
GACCCCAAAGACCTAGAGGCCGGTGCGCGGGACTGGCTAAACGACGAAAA
AGTGATGGAGCGGGCAGTGAAAGACTACTGTGACAAGCCGGACCGCCTGG
AACTCCAAAACCCCTCGGCTTGGTTTACCCATCACGCGCACGAACTCTGC
TTCCGAGCCGACCCCAAAGACCTAGAGGCCGGTGCGCGGGACTGGCTAAA
CGACGAAAAA
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