mRNA_H-paniculata_contig2191.5788.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: D8LK03_ECTSI (Putative: similar to centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK03_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.030e-94 Identity = 153/179 (85.47%), Postives = 165/179 (92.18%), Query Frame = 1
Query: 1 SPSRQVARGRDGR-GGRGKQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKREDPLDDLDSDDDF 534
+P ++ RGR G GGRGKQ LDEESMEEIKEAF LFD EGKG+IDIRELKAAFRALGFQVKKQEIR MLTDV KEG A++S NDFVEMVTPKVLARDPK+EIMKIFALFDEDGTGGISFRNLKRVATELGENL DDELQEMI+EADRD+DGVVNA+EFYRVMRKREDPLDDLDSDD++
Sbjct: 4 APRQRQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQEMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 182
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A6V1NRV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRV6_HETAK) HSP 1 Score: 258 bits (658), Expect = 3.770e-80 Identity = 130/166 (78.31%), Postives = 145/166 (87.35%), Query Frame = 1
Query: 37 RGGRGKQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKREDPLDDLDSDDDF 534
RG + KQ LD+E+MEEIKEAF LFD EGKG ID+RELKAAFRALGFQVKK E+R ML ++ KE AT+ N+FVE VTPK+L RD +EEIMK+F LFDEDG+GGISFRNLKRVA ELGENL D+ELQEMIEEADRD DGVVNA+EFYRVMRKREDPLDDLDSDDDF
Sbjct: 19 RGVKPKQGLDDEAMEEIKEAFNLFDTEGKGIIDVRELKAAFRALGFQVKKAELRTMLQEIDKESAATVEFNEFVEFVTPKMLNRDTREEIMKVFQLFDEDGSGGISFRNLKRVANELGENLTDEELQEMIEEADRDNDGVVNADEFYRVMRKREDPLDDLDSDDDF 184
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A812WEV1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEV1_SYMMI) HSP 1 Score: 241 bits (616), Expect = 7.240e-74 Identity = 122/168 (72.62%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 34 GRGGRGKQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKE-GTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKREDPLDDLDSDDDF 534
GR + KQ LD+ESMEEI+EAF LFD EG+ ID+RELKAAFRALGFQVKK EIR M D+ K+ G+ATI+ ++FVEMVTP++L RD +EEIMK+FALFD+D TG ISF+NLKRVA ELGENL DDELQEM++EADRD DGV+N EEFYRVMRKRE+PLD++DSDDDF
Sbjct: 18 GRPSKVKQGLDDESMEEIREAFNLFDTEGRAVIDVRELKAAFRALGFQVKKAEIRQMFVDMDKDLGSATITFDEFVEMVTPRMLGRDSREEIMKVFALFDDDNTGAISFKNLKRVANELGENLTDDELQEMVDEADRDGDGVINEEEFYRVMRKRENPLDEIDSDDDF 185
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A7S2V0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0E0_9STRA) HSP 1 Score: 239 bits (610), Expect = 7.660e-73 Identity = 122/170 (71.76%), Postives = 145/170 (85.29%), Query Frame = 1
Query: 37 RGGRGK---QALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTA-TISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKREDPLDDLDSDDDF 534
RGGRG+ LD+E++EE++EAF LFD EGKG+IDIRELKAAFRALGF VKK +IR M+ +GKE I+ N+FV+MVTP+++ RD +EEIMK+FALFDED TGGISFRNLKRVA ELGENL DDELQEM++EADRD DGV+N EEFYRVMRKREDPLD++DSDDDF
Sbjct: 25 RGGRGRGKETGLDDEAIEEVREAFNLFDTEGKGTIDIRELKAAFRALGFTVKKNDIREMMAHLGKESHEYNIAFNEFVQMVTPRMMNRDTREEIMKVFALFDEDQTGGISFRNLKRVAAELGENLTDDELQEMVDEADRDGDGVINQEEFYRVMRKREDPLDEIDSDDDF 194
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: F0YQ62_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YQ62_AURAN) HSP 1 Score: 222 bits (566), Expect = 2.570e-66 Identity = 117/170 (68.82%), Postives = 138/170 (81.18%), Query Frame = 1
Query: 40 GGRGKQA-----LDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKRED-PLDDLDSDDD 531
GGR +A + EE MEEI+EAF LFD EGKG IDI+ELKAAFRALGFQVKK EIR M+ DV KE + T+ ++FVEM TPK+ +RD +EEIMK+FALFD+D TG ISFRNLKRVA ELGENL D+ELQEMI+EADRD DG++N +EF+RVM+KR D PLDDL SDDD
Sbjct: 22 GGRASRAPKRAGVSEEEMEEIREAFNLFDTEGKGVIDIKELKAAFRALGFQVKKAEIRRMMQDVDKESSPTVLFDEFVEMATPKMQSRDTREEIMKVFALFDDDQTGAISFRNLKRVANELGENLTDEELQEMIDEADRDGDGMINEDEFFRVMKKRGDNPLDDLSSDDD 191
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A6H5K0C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C1_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.730e-66 Identity = 115/126 (91.27%), Postives = 118/126 (93.65%), Query Frame = 1
Query: 40 GGRGKQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQ 417
GGRGKQ LDEESMEEIKEAF LFD EGKG+IDIRELKAAFRALGFQVKKQEIR MLTDV KEG A++S NDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENL DDELQ
Sbjct: 28 GGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQ 153
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A485KQW7_9STRA (Aste57867_10397 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQW7_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.260e-64 Identity = 109/161 (67.70%), Postives = 132/161 (81.99%), Query Frame = 1
Query: 52 KQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKRE-DPLDDLDSDDD 531
+QALD+E MEEIKEAF LFD +G GSID RELKAA RALGFQVKK E+R M+ D+ K+ TI +FVEM+T ++ +RD KEE+ KIF LFD+D TG ISF+NLKRV TELGENL D+E+QEMI+EADRD DG++N EEF+RVM+KR +PLDDLDSDDD
Sbjct: 6 RQALDDEQMEEIKEAFSLFDTDGSGSIDARELKAAMRALGFQVKKAEVRKMIADIDKDENCTIEFENFVEMMTSRMNSRDTKEEVSKIFKLFDDDNTGKISFKNLKRVCTELGENLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 166
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A8K1FMG2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMG2_PYTOL) HSP 1 Score: 217 bits (552), Expect = 2.350e-64 Identity = 109/161 (67.70%), Postives = 134/161 (83.23%), Query Frame = 1
Query: 52 KQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKRE-DPLDDLDSDDD 531
K+ALDEE +EEIKEAF LFD++G G+ID+RELKAA RALGF VKK EIR M+ D+ K+ + TI ++F+EM+T K+ ARDP+EEIMKIF LFD+D TG ISFRNLKR ELGE L D+E+QEMI+EADRD DG++N EEF+RVM+KR +PLDDLDSDDD
Sbjct: 25 KKALDEEDLEEIKEAFRLFDSDGSGTIDVRELKAAMRALGFHVKKAEIRQMVADIDKDESGTIDQDEFIEMMTDKMNARDPREEIMKIFKLFDDDNTGKISFRNLKRACNELGETLTDEEIQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 185
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: A0A067CJV4_SAPPC (Caltractin n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJV4_SAPPC) HSP 1 Score: 215 bits (547), Expect = 1.170e-63 Identity = 107/161 (66.46%), Postives = 133/161 (82.61%), Query Frame = 1
Query: 52 KQALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKRE-DPLDDLDSDDD 531
K+ALDEE MEEIKEAF LFD +G GSID RELKAA RALGFQVKK E+R M+ D+ K+ TI +FVEM+T ++ +RD ++E+MKIF LFD+D TG ISF+NLKRV +ELGENL D+E+QEMI+EADRD DG++N +EF+RVM+KR +PLDDLDSDDD
Sbjct: 22 KKALDEEQMEEIKEAFSLFDTDGSGSIDARELKAAMRALGFQVKKAEVRKMIADIDKDENGTIEFENFVEMMTSRMNSRDTRDEVMKIFKLFDDDNTGKISFKNLKRVCSELGENLTDEEMQEMIDEADRDGDGLINEDEFFRVMKKRSGNPLDDLDSDDD 182
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Match: K3WUB8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUB8_GLOUD) HSP 1 Score: 214 bits (545), Expect = 1.370e-63 Identity = 108/159 (67.92%), Postives = 132/159 (83.02%), Query Frame = 1
Query: 58 ALDEESMEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEGTATISLNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLNDDELQEMIEEADRDRDGVVNAEEFYRVMRKRE-DPLDDLDSDDD 531
ALD+E +EEIKEAF LFD +G G ID+RELKAA RALGFQVKK EIR M+ D+ K+ + TI+ ++F+EM+T K+ ARDP+EEIMKIF LFD+D TG ISFRNLKRV ELGE L D+E+QEMI+EADRD DG +N +EF+RVM+KR +PLDDLDSDDD
Sbjct: 8 ALDDEDLEEIKEAFQLFDTDGSGFIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINQDEFIEMMTGKMNARDPREEIMKIFKLFDDDNTGKISFRNLKRVCAELGETLTDEEMQEMIDEADRDGDGFINEDEFFRVMKKRSGNPLDDLDSDDD 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2191.5788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2191.5788.1 >prot_H-paniculata_contig2191.5788.1 ID=prot_H-paniculata_contig2191.5788.1|Name=mRNA_H-paniculata_contig2191.5788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp MEEIKEAFGLFDAEGKGSIDIRELKAAFRALGFQVKKQEIRAMLTDVGKEback to top mRNA from alignment at H-paniculata_contig2191:12121..18957+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2191.5788.1 ID=mRNA_H-paniculata_contig2191.5788.1|Name=mRNA_H-paniculata_contig2191.5788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6837bp|location=Sequence derived from alignment at H-paniculata_contig2191:12121..18957+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2191:12121..18957+ >mRNA_H-paniculata_contig2191.5788.1 ID=mRNA_H-paniculata_contig2191.5788.1|Name=mRNA_H-paniculata_contig2191.5788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig2191:12121..18957+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |