|
|
Homology
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: D8LJZ0_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ0_ECTSI) HSP 1 Score: 229 bits (583), Expect = 2.390e-68 Identity = 113/150 (75.33%), Postives = 126/150 (84.00%), Query Frame = 3
Query: 135 MGNAKSMALSPQAAAVVTKTIPATIPSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKYD 584
MGNAKSM+L P+AAA+VTK + + +P+ VETGIFAAGCFW VEL YQRVPGVLET VGYTDGHKKDPTY+EVCSG+T HTEAL+VKFD VV YNELLT+ WD+IDPTTLNRQGND GTQYRSGIYYT+ EQK IA S AA Q K D
Sbjct: 1 MGNAKSMSLGPEAAAIVTKAV-SPMPTPAIVETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLD 149
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A7S2V8A8_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A8_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.490e-51 Identity = 86/140 (61.43%), Postives = 108/140 (77.14%), Query Frame = 3
Query: 165 PQAAAVVTKTIPATIPSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKYD 584
P A ++TK + +++P+ ET FAAGCFWGVEL +QRVPGV+ T VGYT G K +PTYEEVC GTT H EA+Q+ FD ++VSY+ELLT+ WDR+DPT +NRQGNDRGTQYRSGIYY + +QK AEES+A +Q D
Sbjct: 6 PSATQIITKDV-SSLPTNDTTETATFAAGCFWGVELSFQRVPGVISTQVGYTAGEKDNPTYEEVCRGTTGHAEAVQLTFDPSIVSYDELLTVLWDRMDPTQVNRQGNDRGTQYRSGIYYHSEDQKIKAEESIATLQSTLD 144
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A835YZF7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF7_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.510e-51 Identity = 88/149 (59.06%), Postives = 112/149 (75.17%), Query Frame = 3
Query: 135 MGNAKSMALSPQAAAVVTKTIPATIPSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKY 581
MGN+ + A QAA++VTK +PA + A ET FAAGCFW +++ + RVPG+ ET VGYTDGHK +PTYEEVCSG+T HTEALQ+K+D +VSY+ELLT+ +DR+DPTTLNRQG+D GTQYRSGIYY +QK A ++ Q Y
Sbjct: 2 MGNSPTKAFGGQAASIVTKPVPANMDPA-GTETATFAAGCFWSIQISFDRVPGITETVVGYTDGHKANPTYEEVCSGSTGHTEALQIKYDPRIVSYHELLTVLYDRMDPTTLNRQGHDIGTQYRSGIYYHNDKQKEEALKAKEEAQKHY 149
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A7S3HR50_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR50_9STRA) HSP 1 Score: 175 bits (444), Expect = 8.020e-48 Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 3
Query: 132 SMGNAKSMALSPQAAAVVTKTIPATIPSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMK 578
+MGN S +AA+VT+ + + V T A GCFWG+EL +QRVPGV++T VGYT G KK+PTYEEVCSGTT HTEA+Q+ +D VSY++LLT+FWD IDPTTLNRQG D GTQYRSGIYY +Q +AE S+ Q K
Sbjct: 15 NMGNGPSKVFGESSAAIVTRAVAPNVAGKKDVAT--LAGGCFWGIELAFQRVPGVVKTEVGYTQGIKKNPTYEEVCSGTTGHTEAVQITYDPAAVSYDDLLTVFWDLIDPTTLNRQGGDAGTQYRSGIYYHDEDQHQVAERSVEKQQQK 161
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: F0XZB2_AURAN (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZB2_AURAN) HSP 1 Score: 165 bits (417), Expect = 2.690e-44 Identity = 78/121 (64.46%), Postives = 90/121 (74.38%), Query Frame = 3
Query: 219 PAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKY 581
P E +FAAGCFWGV+L +QRVPGV+ T VGYT G +PTYEEVCSG T HTEA+ V F K +SY ELLT+ WDR+DPT + QGND GTQYRSGIY+ T EQK IA +S A IQ KY
Sbjct: 15 PETEQAVFAAGCFWGVQLAFQRVPGVVRTTVGYTMGRFSNPTYEEVCSGVTGHTEAVHVVFRKAEISYEELLTVLWDRMDPTAKDHQGNDYGTQYRSGIYFLTNEQKAIALKSKAKIQEKY 135
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A059CYG8_EUCGR (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CYG8_EUCGR) HSP 1 Score: 163 bits (413), Expect = 1.370e-43 Identity = 77/124 (62.10%), Postives = 90/124 (72.58%), Query Frame = 3
Query: 210 PSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKY 581
P PA E F AGCFWGVEL +QRVPGV++T VGY+ GH DPTY+ VCSGTT H E ++V+FD V Y +LL LFW R DPTTLNRQG D GTQYRSGIYY Q +A+ESL A Q++Y
Sbjct: 16 PDNPAHELAQFGAGCFWGVELAFQRVPGVVKTEVGYSQGHAPDPTYKLVCSGTTNHVEVVRVQFDPAVCPYADLLALFWSRHDPTTLNRQGGDVGTQYRSGIYYYNETQARLAQESLKAKQLEY 139
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A834WC93_9FABA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WC93_9FABA) HSP 1 Score: 162 bits (411), Expect = 3.940e-43 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 3
Query: 216 APAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMK 578
AP + F AGCFWGVEL +QRVPGV +T VGYT G+ +PTYE+VC+GTT H+E +++++D SY+ LL +FW+R DPTTLNRQGND GTQYRSGIYY TPEQ+ A ESL Q K
Sbjct: 32 APGQQFAEFGAGCFWGVELAFQRVPGVTKTEVGYTQGYLHNPTYEDVCTGTTNHSEVVRIQYDPKACSYDSLLDVFWERHDPTTLNRQGNDVGTQYRSGIYYYTPEQEKAARESLEEQQKK 152
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A7S3UAA2_9CHLO (Peptidylprolyl isomerase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UAA2_9CHLO) HSP 1 Score: 166 bits (419), Expect = 9.890e-43 Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 3
Query: 219 PAVETGI--FAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKYD 584
PA G+ F GCFWG+EL YQR+PGVL T+VGY +G K+DPTY+EVCSG T H EA+QV ++ V Y +LL LFWDR+DPTTLNRQGND GTQYR+GIY TPEQ+ IA SL Q K++
Sbjct: 164 PASSLGLATFGGGCFWGLELAYQRLPGVLSTSVGYANGTKEDPTYQEVCSGETGHAEAVQVTYNPKAVGYEQLLKLFWDRVDPTTLNRQGNDVGTQYRTGIYVHTPEQREIAHRSLKDEQAKHE 287
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: A0A7N0TJ95_KALFE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TJ95_KALFE) HSP 1 Score: 160 bits (404), Expect = 2.590e-42 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 3
Query: 210 PSAPAVETGIFAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQ 572
P+ P+ + F AGCFWGVEL +QR+PGV++T VGY+ GH DP Y VCSGTT+H E ++V+FD N Y+ LL LFW R DPTTLNRQG D GTQYRSGIYY + EQ+ +A+ESLAA Q
Sbjct: 15 PTDPSDQLAQFGAGCFWGVELAFQRLPGVVKTEVGYSQGHVPDPDYRLVCSGTTKHAEVVRVEFDPNQCPYSNLLDLFWSRHDPTTLNRQGGDVGTQYRSGIYYYSQEQERLAKESLAAKQ 135
BLAST of mRNA_H-paniculata_contig2191.5787.1 vs. uniprot
Match: Q6V5J4_SISIR (Peptide-methionine (S)-S-oxide reductase (Fragment) n=1 Tax=Sisymbrium irio TaxID=3730 RepID=Q6V5J4_SISIR) HSP 1 Score: 157 bits (397), Expect = 9.680e-42 Identity = 71/115 (61.74%), Postives = 88/115 (76.52%), Query Frame = 3
Query: 240 FAAGCFWGVELLYQRVPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELLTLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKYD 584
F AGCFWGVEL +QRVPGV +T VGYT G +P+YE++CSGTTRH E ++V++D +Y LL LFW R DPTTLNRQGND GTQYRSGIY+ TPEQ+ +A+ESL Q + +
Sbjct: 41 FGAGCFWGVELAFQRVPGVTQTEVGYTQGIIHNPSYEDICSGTTRHAEVVRVQYDPKDCTYQTLLDLFWSRHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKLAQESLERHQQQME 155
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 166.0 |
| Seed ortholog evalue | 2.3e-38 |
| Seed eggNOG ortholog | 44056.XP_009033024.1 |
| Preferred name | MSRA4 |
| KEGG ko | ko:K02214,ko:K07304,ko:K14442,ko:K16914 |
| KEGG Pathway | ko03018,ko04110,ko04111,ko04113,map03018,map04110,map04111,map04113 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0031967,GO:0031975,GO:0033554,GO:0033744,GO:0034599,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071704,GO:0080167,GO:1901564 |
| EggNOG free text desc. | peptide-methionine (S)-S-oxide reductase activity |
| EggNOG OGs | COG0225@1,KOG1635@2759 |
| Ec32 ortholog description | Peptide methionine sulfoxide reductase |
| Ec32 ortholog | Ec-06_007510.1 |
| EC | 1.14.11.27,1.8.4.11,2.7.11.1,3.6.4.13 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03009,ko03019,ko03032,ko03036 |
| Exons | 5 |
| Model size | 1774 |
| Cds size | 780 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2191.5787.1 >prot_H-paniculata_contig2191.5787.1 ID=prot_H-paniculata_contig2191.5787.1|Name=mRNA_H-paniculata_contig2191.5787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
MGNAKSMALSPQAAAVVTKTIPATIPSAPAVETGIFAAGCFWGVELLYQR
VPGVLETAVGYTDGHKKDPTYEEVCSGTTRHTEALQVKFDKNVVSYNELL
TLFWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKTIAEESLAAIQMKYD
TTWRKGGSALSRETRQRYGAMGSVRCSHSADWLERGSNKSPSAGSCVDHF
DAAAASLTTPGWGVNVATTRTSPSAGPSILLYRTPQRGDGQMVLSAGRKR
VLWCRNRSG* back to topmRNA from alignment at H-paniculata_contig2191:428..10641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2191.5787.1 ID=mRNA_H-paniculata_contig2191.5787.1|Name=mRNA_H-paniculata_contig2191.5787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10214bp|location=Sequence derived from alignment at H-paniculata_contig2191:428..10641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGGGTGAATTATTGACTGAATTCATCATCTCTCTCATATCAGGTAATT
CAAGGACAACCAGCGAGCTCACGACAAACAGACACGACAGCAGTACATTC
AGTGACCCAACGTCGCGATATTAGGCTATAGTCAATGGGAAACGCGAAGT
CCATGGCTCTGAGTCCGCAAGCAGCCGCTGTCGTTACCAAGACCATCCCT
GCTACAATACCGTCAGCCCCTGCAGTCGAGACAGGCATATTTGCCGCAGG
TATGTACTGTGTTTTGAGTCCCCAACCGTGCTGTTACCGTCTACTTGAGT
AGAGTTCATGGGTTCAAGACACGGGGCGGGACAGCACCGAACAGAACCCG
AGAGGGGGCCATTTCACGTTCCACGAACGGCACGGGAAGGGACGGGATAG
GATGAGACGGGATGGGCCCAATTGATAAGGGAGTAAGTAACCCCTTCAGC
GCCGGCTGCTTCGGAACAAAAAAACATATACCAAAAACAATTCCAGCGCT
GGCTTAGCGCTGGAGTAATTGTGAGCAGGATCATGCTTACAACGCCTACC
TGTCTAGTTGTGTATGCTTTCTCTGTTGAAATCTATCTTGACAGTGCCGA
TTCCATATTTCTGCAGTAAGGTGATGGTTGTAGTAAAAAAATTAATCCAG
TGGGTCAGGTATTTTTCTTTTTTAAATTAGCTTCCTTCTCCATCCCGCAC
ACCGAAGGCGATTCCGCTCAGAAAAGAGAGGTCGAAGCCCAAAACTTCAG
AGTATTTTATCCATGGACCTACACCCAAACGGATAGGGTAGCTCGTGAAC
TAAGCATGACTGAAGTCTAGTCAGAGGTCTTTTAGTGAGTGCAACCCCCA
CACTGCCTACTTGGTTCGGCCGAACCGGGGTGGTGCCTACCCCGCAGGGG
AACAAGTAACTCCGTTCTGTTAAAGGAAATGTAGAAATACCGAAGTATGG
AAGCATCGGATAGAGGTTTTTGCCTTAGCCTTCCGGGGGTTAAAAAAATA
TATATGTTTTATCCAGCAATATGTCACCAATGCTCGCGTCCATTGACGCG
ATCGAAGCTTATTCTCTCACACTATATAGTTCCTGTCCAATCGCTTGTGA
CGAGCGCGCTTCACAGTGAAGTCAAGAGGTTGCACTTGCATTTTCGTGGT
TCCCCATTGGCCTGACTGTGGGGCGTTCCCGGACACGCGATTCCGACCAA
CACCCTAGTCTCAAACTCAGCACTTCGTACTAGAAACCTAAACAAGATCT
CTCATAATGTCTACTCCCATATTGCTCCCAAGGTGAACATTTGAAAGGGA
CACAGGTTAGAGCGAAGCCAGGGAAGTATAACATCTTTGAAAGGCAATTG
GGTACACACTGATTAAGCCCATTTTTTTAGGGCAGGGCACGGTAAGGATT
TTCGAAAACGGGGTGGAATGATAACAGTAACGCAAGCATGGTAATTAATG
GCACGGTAAATGGTAATAATTTGATCCGCGGTAAATTTTGGGTGGAGTGC
CATCTCTACGGAAATTAACGGTACGGTAAATGGTGATAATTTTATCCGCG
GTAAGCTTTGGGTGAAGCGCTATCTCTACCGTAAATAACGGTACGGTAAA
TTTTTCGCAATAAGTTTTGGCTGGAGCGCCATCTCTATAGTAATTACTGG
AGTGGGATATAAAAAACGATTTTTGATGGCAACGAAGCAGTAAATCGGGC
GCCGGTACAGTGATACACTACTGCTAAATCCGTTGGCGGCATGGGGAAGT
TTGGGACAACAGTTTTTGAAGCAAAGAGATGGAAGCGGTGTCATTGTGGC
GGTAAAAAAAAATGAGAAACCATGTTGACGCCTGATAGCAGCAGTACCTG
GCCTATATTCGTCGAACATTGTTGACACTTCAACGAGGACTTTGCTTGTT
TTCTGTTTCTTGTGTCGATTCACGATTAATTCGTCCCTTCCTGGTCTGGT
AAAGCCCACACCACTACGGTGGTACTCAAAACCGGCTCATTCTTAGTTTT
CAACTGCTGTATTGAATCCAATTCCATCGGGTACAAATGGAGATTTCATC
AAGACGTGCAATCTACTATAGATTTCTCAACCTTCACTCGGTCACCTTAA
CCAGGCAAGTGGTCTAGAACTAAATTAGTAACATGCCGTCACAATCGCGC
CTGCATATTCTCAGGAGCTGTTATTCCATACGCTGAACCAGGTGTACCGT
GTTCTACTCGACCATCCACACGCTGCTGAAAGATAAGTCCCAAAACATTT
CAAGGTTCACCCCACTCCTGATGGCACTCCTGAGGAGGCGACTCAACAAT
CGCATCTGTTTCCAAGGGTACTCAGATTTCTACTTCCAAAGATTGGCCAG
CTGAAGTCGTTTGGAATTCTTCAACAGCCTCCTTCACTTTAAGAGTCAAC
GCCTGCTGCTTGCGCATGATTGCCTTGAGAGCCTGAACCTCAGGGATGCT
CTCCTGGTTGAACCGGAGGAACATGGTCTGCTCGACTTTGGTAGCCGACA
TGTTCGCATGCAAACTACCGAGGCAGAGATACAGAGAAGAGAAACTCCTC
TCCGCCGGGCAGCTTGTAGCACAAACCGAGTGGTAGGGGCGGGCGACCAG
CGCGAGATACAGCGACTTGGCTGGCACAGTGGCGTCGTTCGTGCTTATCG
CTACCATCGTAGAAAATCTGCAGACCCAGAAGAGGAGAAGAGAAAAATCT
TCTGTCTCCTCCGCAGGGCCTTGGGCCCTTGGCGATATAAGATTCCAGCT
TCACTCTGAATTGGTCGCCGTGCTTCACGTCCGCATGGCCTGTTCCACCG
CCTCCACTAGCCGGCCGATCCCTAGTTACAGCATGTAGATGATCCTGTTT
CATCTTGCTCAGCTTAGTTTTCTTCGCGGCAGGGTGTCGTACGTTTATCC
CGCAGCCCCGATCGCCGCCGCTTCCGTCCACGCCAGATTCTGGCGAAGTG
AGCGGACACCTTACGGTCACAATGTGGGCTGCGATGTCGTCCCTCGCTGC
TGCCATGTACTCCGCCTTGACCTTTCCCCCCCCACCTACGCACACATGCT
TGAACAAGGGTGCACAATAATGTTGAACTGCAATTACAAAGAGAATTTGA
ACTTGATTGTTACTTTCAACCTGGACACAGGTTTGTGAGCGTACAATTGT
AGGTACCTCCATGGCATGGAAATATGGTGCTGGCACGGTAATTATGGACG
GTAAGCCGCCGGCACGGTAACAGATGGTAACGGTAATCGGTAAGCGAATA
ATCACGGTAACATATGGACGGTGAGTCGCCGGCACGGTAACAAATGTTAA
CGGTAAACGGTAAGCGAATTATCACAGTCACGAACGGCTACGGTTACCGT
ACCGTTAAGCGCGGTAAATCGTACGGTAACGGTAACCGTGCCCAGCCCTG
CAATGTATGCGTCTCTTGGTGCTGCTACATACAGAGCAATACTGTAAGCT
TCTCCATAATGCCGTCGTAGCGAACCAGAAAAAATTTAGGCCTGTTCTGC
TGCTGAGGTTAAAATGGATCCAACAGGACCCAAACATTTCACGGTGGCTC
ATGACGGGATGAGATTAGACGCGTATGTCGAGAACATTTTTTTTAAGTAG
CGGGGTTTCGACTTGTTTTGGTTTTATACACACATCCATCGAGAATAATA
TCAAATCTCAATGCTAGGTGTAAAAAGGTATCGACTGTTTTCACAACATT
CACGTACGTCGAGGGCTAGCGCAGCAAGCGCAATGATGTGTGCTCAATGC
AGAGGTGGTACAGCTGACAGAATGCAGTGTACACATTGGTTCCATCAAGC
GGTGGCAGCCAGCTGAACAGCGCAAACAGCATGGTACGGTAGAATTGTGT
ACGGCGAAATAATAGACAGTACTGCGTCCAGTATACTTCATGTACTACAC
TGCATTCAGCACCGTATCTGCGGCACACAATGAAGAGAGAGGGAGAGAGC
TGACAGGCACCATCATATCCTGAGAGCCTTGTAGCGAGCGAGAGCCGCTG
CATGTATGGCGCCCTGTTATGAGTAACGGTACCCACAGGCACAGCAGCAG
GCGGCCTCCCGCAGTCTTCCCAGTCGAGAGATGACAGCATGACTGATATG
TGCTATATTTGGAAACTAGACGCTGAGGTTCCCGGAATAAACTTGTTTCT
TCCTGTCGGTTAGTTTTTCCCAGGTGAAATGTTTTTATTCCAATGGAATG
AGACGATCGGACGATAGACTTCGAGATTTGACAGGACGCGGACCTCGTCC
CGTCGTTTATGGGACCATCCTGTGGAAAAATGCCGTCTCATTCCCTACAA
AATTTAGCCCAATTTTCTTCCATTGTCCTTGGATCTAGCGGTACAGAGCT
CGGATTTTTGTTGTTGAGTTTTCATTTTCATGTCGAACGTGGGATCGTGG
ACGTGGCTTTCTGTTACCATTCCGCGTAACGTCCTTCGTGCCGAACTATC
TTAAAGGCATGTTTGAATTTTCAGCGAGACGCCCCATTGATTTTTGACTG
GGTGTGACCTGAAGAATGGGATGGGACTTGCTGCTTGAAAACCCTGGGAA
TGAGCACGGGAACTGGACCCGGTTCCGCCCTTCGAGAAAACGACAGAAGG
GGAAGGAGCCCAGTTTGTTTCTTCTAGGAAACGTTGAAACGGGACCACGA
TCTCGTCCCATCCCGTTAGCGTCCCGTGGTGCCATATCAACCCCTAGGTA
CTACACTTGTGCATTACACGACTAACTTGGCCTCAATAGAGAAGGCAGGG
GAATATGAAACTAGCACAAGACATTCGCCGCCAGCGTTCATTATGGAAAT
ACTGAAAGACCAAAGAGGACGGATAGCTTTCAAGCTAGGGTGATTTGAGG
AACTACGTTCGGCCATTCCACCCCCCAGATGTTTGTGCAGCAGAAGTGTT
GGTCCTTCCTTTCGAAAATGATGGGCAGCGAGAAATATCTCGACCACAAG
GATTCTCTCAACTATTAGGGCGAAAGGCAGATATCTATAGCGAAGATATG
CTAATTGTCGCGTACATGTGCCCTCGGGTCCTATGGTACACCTGTAAATC
GCATATGGTATCCGTGTTGGAGCCGTATGAGACTCACTGACGTCCCGACT
CGAGAATGGGTGTCCGACAGACAAACAGTAGGTGTCCGAGTTTCAGTGTT
CTCTGCTTTATCGTCACCGCTATTTGTAGATGTCTGAATATACTCACGTA
AACATATCGCAGAGATCGCGTGTCCGTCTTATATCCGTTGCTCGTATTTG
TTGACGTTTTTATATTTGGGGTGACTTGTGCTTGCGATCCGACGGTTCGG
GACTGCCTGAAGGTCAGTCGAGAATCTATCCGATAGCATTTGTCTAGCGG
CATTTTTTTATGTTCCGTCCGCGCTCCTTCTTGTCCCGATGCGAGCAAAG
CCAACGCCAAGCTCTGACCCTAACGTTACCCGCAACCCTCAGGGTATAGT
AGTAAAGCTCAAAGCAGTAACCGTTTCGTCAACGTTCGAAGACATGTTGT
CATGGTGAAATTCTTAATCTTTCTGTGGTCGCAATACGCTCAGTAGGTGT
ACCCCAGGTATTCATCTCGGACAAGAGATAATCTATGCATACGTTGCTCC
CGTGCATTTTTGTAGATGTCGGCGGGGGTGTCCAACAGGTACACTTCCCC
GTAGATACCCTTCCGCGCACCTCAACACCAAGGCATCAAATCAACTTAGC
GGCGCGACAACGAAGCTCAGGAACGTTTCATTACGATGTGCACGCCCCAT
GTGCAGCAGATCCCTCCGCAGGAAAACCGCCGAATCGTCTTTCCCACAAA
TTGTATGCACACGATACAATACCACGTATCACATGCATACGGTATAATGG
ACAGCTTCAAGGCTCACGCGGCATTGATTTATGATTGGTAGGCTAGGTTA
TTGCCTCCTGCCGAGTAGGTCGGCGATGAACAACCTCCGTGTTTCGATAT
TTTTCAGGTTGCTTCTGGGGTGTTGAGCTATTGTACCAGCGAGTGCCCGG
CGTCCTAGAGACGGCCGTCGGTTATACCGACGGCCACAAGAAGGACCCGA
CCTACGAAGAGGTGTGCAGTGGAACGACCAGACACACCGAAGCGCTCCAG
GTCAAGTTTGACAAGAACGTCGGTGAGAAGCAAGCAGTGTCTAACGGGGG
GGGGATTTCTAAGTTGACGCTGTACCATATTCAATGTATACCTCCATGCA
GCGCCATTTTGTAAAAAAGGTAGATGTCACTCCGAGAATCAGTTGCAGCC
TTTTCCATTTGCAGTTCAGACTCTTGCGTTCCTTGTAGAAGTACCTATTC
GTATGATGCTGTAGACCGATTGAACCGAATCATTTTCTAGAGGTTGTATT
TACATGGGGCAGAGCCCACAGCTCACGCCATAATTAACGATCCGAAGCTT
TTTCTAACTTTCACTCTTGAACAGGAAGTCTGTGCTTCACATAGATCTGT
CTCTATATCTCTCGGAGCTAGAGATAATTGTTGATTTGCAGCCAATGTAT
GCTGGTTCACTACAGATGGGGTGGCACTTGACCTTATCCCATCCTCCCGT
ACCACCCGTTTGTGCAGTTTCTTACAACGAGCTGTTGACACTCTTCTGGG
ATCGTATAGATCCCACGACTCTCAATCGCCAAGGAAACGACAGAGGAACA
CAGTACCGTTCTGGGTGAGTCCTGCAGAAGGTAGCGGGAGCGCGTGGAGG
AATGTTTGTATGTGATTGGGGGAAGGGGAAGAGGGGATGCCGTACTAGCA
CCCAGGAGAAAATATTAGATGTTTGGTGTATTGACTAGCCTGGTACACGT
TGCTACCTTACGCGCACGAGCGTTTCTCTTCTCGCTCTCCCGTTGTAGCT
GTTGCCGTGAACCGCGGTCGCTTGGCCCCTCCTTCCGCTTTGGCCTATTT
GAGTATCCTCTCCTCCTCTTGATGAACACGCACCCGCGCCACCCCGGCGC
CGCACCATTGGCACCTCTTGTCCATACCGAAGGAATTTTTCCGTTCCCTT
TCATGCGCAAGCTGGGAACCCGTAGTCGCCGCATTCTACTCTTTACGTGT
TGTACTTGATCTGTTGAGCCGGGTTAAAAAATGTGATCGTGACTACATAC
GTCGGGCACCAGTGCGTACAATCCATGGATTTTGACAGATATGTCCAACG
TTCTCGGACTTATACCCGCACGCCAAAACAACCAGCTGTCCTTCTCACAG
TAATTTTCTCCCTTCGCAACTTCCCCTCGAAACTATTATGATTTACAGCG
TCGGTTGACTCCAACCCGAGATTTTCTTTCAACAATGAACAATGTTGTTG
CACCATATATATATATCAACGTATATTCATCCATGTTAGTTTCAGCATTG
CACCTGGAAGAGCCTGTGCCACTGCAAGAGCGTCATGCTGTTGGCTCTGA
TCACCCCCACACTAAAGGTTCCGGTAGTTGTTTTTCTCGCTCATATTAAC
AGTGCGAATCGCGGCATTGCCACCTCGAAGTCTGACGAGGACGAGCTGAA
AGCCGCGGCTGTTGCGGCGGTGGCAAAAATAGAGACGCAGTAGAGTCGCG
CTACGATTCGGCACTGCCCGGTCACTTCTTCCCTCTGTTGGAAATTTAGT
CACGAGGCACCCGCGTTGCTTTTTGGAAGTTAAATTCCAATTACGCTCGC
CCACGAATATACACCGACATGTTTTAGTTGACAAAGGACCCGCTCAGAGA
CGTCCGCACAAAACATTTGCACCGACATTCACACACATTGTATACATCAT
ATTTGTGTTTTGACTCGTTCATCAGGATCTACTACACAACCCCCGAGCAG
AAGACGATAGCTGAGGAATCCTTGGCGGCCATCCAAATGAAGTACGACAC
GTGAGTAAGCACTGCAATGAAGAGATGACGTAACCGCTCAAACGCATGAC
TCCACTTAGCTCGAGATCTCTAGGATGATTAATTGTATTGTCCATCATTC
TGTTCGGGTGCAGATTTGTTTGCCAGTTTTTGTTGAAAACCAGAATGGTT
GACACGGCACTCGTTCAGTAAGAACTATCCACGCGCAAGGCTTTCCCCCC
TTTCTTTTCCCTGCCAGTACGATGGAAATTGTGGCATATTCGCGATGCGA
TATCATCAGAAGACGTTTGACACCGGACGATGCTATAGATTCCCATGGTC
AGATTTGCAGTTGCGTGGGTTGAATCTCCCTTTCCCGGCGCTCTATCTCT
TATTACCTGGGCGGTTGCGTTGTGTGTTGTCGACTAAATCAGACCGATAG
TCACGGAGATCAAAGCGGCCACCATCTTCTACAAAGCAGAGGACTATCAC
CAGCAGGTGATCTATGCTTAGCACAGTAGATTGTTGTTTTTTCGTGGGCT
ACAGGGTTGTGGGACAAAAAATTCGCGGCTGCGACGTAATAGCCGGTCGT
CCAGCTACAGTTTTTCAGCATGCGGGTCGCTGGGATACAGCTTGGTGTGC
TTTCCCGAAGGTATACTATCTATTGGGTTAAAACATTGCGGCGAAGAAGA
CATAACGGTAGAGCAACTTTATCCATTTTGTTCTTTGTGCAGCTGTAAGA
CGAGTGTTGTTCTTGATGCCACTGGAACCCTTTCGGTGAGCTCCTGCTAG
TAGCTGTATTTGTAGGGGCACCGATTGTGTTTGGACAGACGAGTGCCTCT
ACTCATTACTGTCATGGCGTGCGCTATCCATTTAACGCCACCACCGTGAC
GGCTCTGTTGGAACACCCCTTCCCACCTCTCCGCTTCTTGTCTCGTGTGC
ATCATACACACCACTTATTGCTTTAATATTCTCCTCTCAGCATATGCGTA
CTTGTAACAAGCTCTTTTACAAGTGTGCTCACTTAGAAGAAGTTAGCGAC
ATAGGTTGACAATTGCTGAATACATACGACAGGGCAGATACGTAGGACTA
ACGTTAACGTTCCTCACTTGTTCAACAGTTGTCCCCCAATAATCGCCACG
CCTCAACAGCTTCCTCTCATCTAATACTGAGAGGTCTTGGCTCTTGGTTC
ACGCGCGCTGTGTCTTCCTCTGGCAGTACTTGGAGAAAGGGGGGCAGTGC
TCTCTCAAGGGAGACACGTCAAAGATACGGTGCTATGGGTAGCGTACGTT
GCTCACATTCTGCGGATTGGTTGGAGAGAGGGAGTAACAAGAGTCCTTCG
GCAGGCAGTTGTGTGGATCATTTTGATGCCGCTGCGGCGTCGTTAACTAC
GCCTGGGTGGGGCGTTAATGTGGCAACGACTCGCACGTCTCCGTCGGCTG
GACCGAGTATTCTATTGTACAGAACCCCTCAGCGGGGCGATGGGCAAATG
GTTTTGTCAGCAGGGCGTAAGCGTGTCCTGTGGTGTAGGAATAGGTCGGG
GTAGACTACAGCAGTTGTGAGCCATGCCTGGGGACTGTCCGCGCATAGGA
TATAATCAGAGGTGTCCTTTTTTTCTTTTTTTAAACAGCGTTTAAAACGG
GTACCATTGAGAAAAGCAGTATTCTAACAGTACCACGATAAATCTGCACT
CTGTGTGAACACTATGTGGACGTTGTTTTTGTCAAATTTCAAGTGGTCAT
CGTGTTATTCCCGAAATACCAAACACCGTTTGGTAAAAAAAACGCGGAGA
TATTGTTTCCACGGAGTGTAGCTTTATCGTGGTACTTTTAGAGTACTGCT
TTCCTCAATGGTACCCATTTTACACGCGGTTAAAAAGAACAATATTACCG
AGAACACCTCTGGATATAATAAGACTTCTTTGGATGTTGTCTATTAGACT
GAAACTAGCGAAGGTTTGATGCTTCTCTGCCTCTACTATGTCTGTATGTA
TCGGGGTTGCCCGTGCCTGACGCCTCGGGAATCGTGTGTGCGGGTTATGT
ATTTGGCAAGGTGTACGAGGGCATCAATGTGTGGGTTTCGGTTGTTATCT
GAAGACGTACGCGTACCCCAATCAGGTACACCGTTTTGTATTCGAGAGTG
TTTTCAAATTGATGAGTTTGGTTCGAGTCGAGTTGATCTGGACGCGGGTA
TCGGAATCCACGAATACATCGTTTTGCCTAATAGGCAACTTGATTTGTCA
GTGTCCCTATTAAAAGGCGTGACACTGAAGAAGTTGCCAACATAAGTACT
AGCATACATTTGAACATGTGGCCAACTGACCGGTCGTCATGGATTGAAAA
TAACCATTCGTTTTCCCTGATGAATACAGCATTCGAACTAAAATAAGGTA
CATTTTTTTACCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2191:428..10641+ >mRNA_H-paniculata_contig2191.5787.1 ID=mRNA_H-paniculata_contig2191.5787.1|Name=mRNA_H-paniculata_contig2191.5787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig2191:428..10641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAAACGCGAAGTCCATGGCTCTGAGTCCGCAAGCAGCCGCTGTCGT
TACCAAGACCATCCCTGCTACAATACCGTCAGCCCCTGCAGTCGAGACAG
GCATATTTGCCGCAGATGGGAAACGCGAAGTCCATGGCTCTGAGTCCGCA
AGCAGCCGCTGTCGTTACCAAGACCATCCCTGCTACAATACCGTCAGCCC
CTGCAGTCGAGACAGGCATATTTGCCGCAGGTTGCTTCTGGGGTGTTGAG
CTATTGTACCAGCGAGTGCCCGGCGTCCTAGAGACGGCCGTCGGTTATAC
CGACGGCCACAAGAAGGACCCGACCTACGAAGAGGTGTGCAGTGGAACGA
CCAGACACACCGAAGCGCTCCAGGTCAAGTTTGACAAGAACGTCGGTTGC
TTCTGGGGTGTTGAGCTATTGTACCAGCGAGTGCCCGGCGTCCTAGAGAC
GGCCGTCGGTTATACCGACGGCCACAAGAAGGACCCGACCTACGAAGAGG
TGTGCAGTGGAACGACCAGACACACCGAAGCGCTCCAGGTCAAGTTTGAC
AAGAACGTCGTTTCTTACAACGAGCTGTTGACACTCTTCTGGGATCGTAT
AGATCCCACGACTCTCAATCGCCAAGGAAACGACAGAGGAACACAGTACC
GTTCTGGTTTCTTACAACGAGCTGTTGACACTCTTCTGGGATCGTATAGA
TCCCACGACTCTCAATCGCCAAGGAAACGACAGAGGAACACAGTACCGTT
CTGGGATCTACTACACAACCCCCGAGCAGAAGACGATAGCTGAGGAATCC
TTGGCGGCCATCCAAATGAAGTACGACACGATCTACTACACAACCCCCGA
GCAGAAGACGATAGCTGAGGAATCCTTGGCGGCCATCCAAATGAAGTACG
ACACTACTTGGAGAAAGGGGGGCAGTGCTCTCTCAAGGGAGACACGTCAA
AGATACGGTGCTATGGGTAGCGTACGTTGCTCACATTCTGCGGATTGGTT
GGAGAGAGGGAGTAACAAGAGTCCTTCGGCAGGCAGTTGTGTGGATCATT
TTGATGCCGCTGCGGCGTCGTTAACTACGCCTGGGTGGGGCGTTAATGTG
GCAACGACTCGCACGTCTCCGTCGGCTGGACCGAGTATTCTATTGTACAG
AACCCCTCAGCGGGGCGATGGGCAAATGGTTTTGTCAGCAGGGCGTAAGC
GTGTCCTGTGGTGTAGGAATAGGTCGGGGTAGTACTTGGAGAAAGGGGGG
CAGTGCTCTCTCAAGGGAGACACGTCAAAGATACGGTGCTATGGGTAGCG
TACGTTGCTCACATTCTGCGGATTGGTTGGAGAGAGGGAGTAACAAGAGT
CCTTCGGCAGGCAGTTGTGTGGATCATTTTGATGCCGCTGCGGCGTCGTT
AACTACGCCTGGGTGGGGCGTTAATGTGGCAACGACTCGCACGTCTCCGT
CGGCTGGACCGAGTATTCTATTGTACAGAACCCCTCAGCGGGGCGATGGG
CAAATGGTTTTGTCAGCAGGGCGTAAGCGTGTCCTGTGGTGTAGGAATAG
GTCGGGGTAG back to top
|