mRNA_H-paniculata_contig2189.5780.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A5D6YE87_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE87_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.000e-26 Identity = 92/252 (36.51%), Postives = 124/252 (49.21%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVVEEEKDPSFFAPWSSTEQP 2660
VL+AESPG LGIGGK+WDS VL YL AL RP L+ G+RV+ELG+G GLV + CALLGA A + TD+ EV L+R N+ LNF ++S++ +A + RP TA WG P+++V+SDVVYDP GY PL+A+L+ + + +MAHR R+P +H+FF L F +E S FA E+P
Sbjct: 344 VLLAESPGNLGIGGKLWDSCLVLARYL------ALHRP------------------------LVAGKRVVELGSGLGLVGIVCALLGARATL-TDVAEVVPLLRYNIDLNFP--------------------------ASSSDSXXXGSAASGGGRP--TAATHLWGTEPAALATPHPDVVVLSDVVYDPEGYAPLVASLVALTMERTVVLMAHRSRNPMEHQFFELLGAQFALERVDWASEFAAAGGEEEP 536
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A1V9ZB44_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB44_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.840e-25 Identity = 85/235 (36.17%), Postives = 113/235 (48.09%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKA-FDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVV 2606
+ +AESPG LGI GK+WDSA +L YL A PT LL G+RVLE+G+G GLV + CALLGA++V TD+E+V A+++ N+ALN ++ A LAWG D A FD ++VMSDVVYDP GY PL+ +LLD+ P +MAHR RHP++ +FF L + F
Sbjct: 304 ITLAESPGHLGIAGKLWDSALILTTYL---------------ARYPT---------------LLAGKRVLEVGSGLGLVGMVCALLGAASVTLTDMEDVVAMLKYNIALNDLDSVA-------------------------------------------HARALAWGSAVDHLDAPFD--VVVMSDVVYDPTGYAPLVQSLLDVSTPATTMLMAHRSRHPQEKDFFDLLGKAFTT 463
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A7S3USI2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USI2_HETAK) HSP 1 Score: 116 bits (290), Expect = 7.360e-25 Identity = 80/234 (34.19%), Postives = 106/234 (45.30%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVV 2606
+LVAESPG LGIGGKVWD+ VL YL + R L++GR VLELG+GTG V + A LGA +DL E+ LI N+ +N R +D+ V A+P++WG P D PE+IV+SDVVYDP Y PL++TL ++ M HRHR+PED FF + + F +
Sbjct: 109 ILVAESPGHLGIGGKVWDAGLVLLKYLAD------------------------------NRSLVQGRAVLELGSGTGWVGLAAAALGARRAALSDLPEICPLIDLNIKINMP-------ARAEDAS--------------------------------VFAVPISWGVPIDFTNFTIPEVIVLSDVVYDPELYNPLISTLREVSTAETKIYMTHRHRNPEDGSFFEEVQKYFEL 273
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A067CIC8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIC8_SAPPC) HSP 1 Score: 118 bits (295), Expect = 4.700e-24 Identity = 81/236 (34.32%), Postives = 107/236 (45.34%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDE-GKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVVE 2609
+ +AESPG LGI GK+WDSA +L YL T+ L +RVLE+G+G GLV + CA LGA+AV TD++EV +++ N+ LN + +A PL WG S F E++VMSDVVYDPAGY PL+ TLLD+ P +MAHR RHP++ +FF L F E
Sbjct: 306 ITLAESPGHLGIAGKLWDSALILTTYLSRHQTV------------------------------LSRKRVLEVGSGLGLVGMVCARLGAAAVTLTDMDEVVPMLQYNLQLNALEAIA-------------------------------------------SAAPLCWGTSSSHLSPPF--EVVVMSDVVYDPAGYAPLVQTLLDVTTPSTTILMAHRSRHPQEQDFFQLLRASFDTE 466
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A225VKW2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKW2_9STRA) HSP 1 Score: 118 bits (295), Expect = 8.080e-24 Identity = 88/255 (34.51%), Postives = 126/255 (49.41%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLA----WGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVVEEEKDPSFFAPWSSTEQ 2657
+L+AESPG LGIGGK+WDS VL YL + + LL G+RV+ELG+G GLV + CA+LGA V TD+++V L+ N+ LNFS ER+ A A+ LP+A WGEP + + P+++V+SDVVYDP GY+PL+++L + P + +MAHR R+P +H+FF L++ F E+ W STE+
Sbjct: 337 ILLAESPGNLGIGGKLWDSCLVLTRYLA------------------------------AHQELLVGKRVVELGSGLGLVGIFCAMLGAR-VTLTDMQDVIPLLDYNIRLNFS-------ERS----------------------------AADSAKGDAGVLPVARAHLWGEPPCDLPS-QPDVLVLSDVVYDPEGYKPLVSSLEALTTPETLVLMAHRSRNPMEHQFFELLSQTFSCEQ-------IDWLSTEK 517
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: T0S637_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S637_SAPDV) HSP 1 Score: 117 bits (293), Expect = 8.510e-24 Identity = 85/236 (36.02%), Postives = 113/236 (47.88%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWG-EPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVVE 2609
+ +AESPG LGI GK+WDSA +L YL A P ++L G+RVLE+G+G GLV + CA LGA+AV TD++EV +++ N+ LN A EA +A+A L WG P+ FD ++VMSDVVYDP GY PL+ TLLD+ P +MAHR RHP++ +FF L F E
Sbjct: 306 ITLAESPGHLGIAGKLWDSALILTTYL---------------ARNP---------------QVLAGKRVLEVGSGLGLVGMVCAHLGAAAVTLTDMDEVVPMLQYNLKLN------------------------------ALEAVASASA-------------LCWGTSPAHLSPPFD--VVVMSDVVYDPTGYAPLVTTLLDVTTPSTTILMAHRSRHPQEKDFFELLGVSFTTE 466
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A1V9ZX02_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX02_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.910e-23 Identity = 81/235 (34.47%), Postives = 111/235 (47.23%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKA-FDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVV 2606
+ +AESPG LGI GK+WDSA +L YL A P LL+ +RVLE+G+G GLV + CA LGA +V TD++EV ++ N+ LN KNA A L WG P+D + FD ++VMSDVVYDP GY PL+ ++LD+ +MAHR RHP++ +FF +L++ F V
Sbjct: 299 ITLAESPGHLGIAGKLWDSALILTTYL---------------ARNP---------------HLLKSKRVLEVGSGLGLVGMVCAFLGAKSVTLTDMDEVVPMLNYNIRLNNLQ-------------------------KNA------------------VAKALCWGSPADHLEPPFD--VVVMSDVVYDPTGYSPLVQSILDVSVNTTKILMAHRSRHPQEKDFFDQLDKYFTV 458
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: G4Z4A8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z4A8_PHYSP) HSP 1 Score: 113 bits (283), Expect = 2.630e-22 Identity = 91/281 (32.38%), Postives = 136/281 (48.40%), Query Frame = 3
Query: 1896 HGAVLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMRPGMMAVMAHRHRHPEDHEFFCRLNELFVVEEEKDPSFFAPWSSTEQPPTVIVESVDNGTGSKQQNPNIQIFRI 2738
H +L+AESPG LGIGGK+WDS VL YL I L G++V+ELG+G GLV + CA+LGAS V TD++EV L+ N+ LNF L++T+ PTK ++ AV AR + WG+P + + P+++V+SDVVYDP GY PL+++L + + +MAHR R+P +H+FF L+ F ++ W +E+ S+ + Q +++IF I
Sbjct: 336 HHDILLAESPGNLGIGGKLWDSCLVLTRYLAARWEI------------------------------LVGKQVVELGSGLGLVGIFCAMLGAS-VTLTDMQEVIPLLEYNIRLNF-------LDQTEGE-----------PTKGPAKG---GGAVVPAARAHL------WGDPPRDLPS-QPDVLVLSDVVYDPEGYAPLVSSLDALSTTETLVLMAHRSRNPMEHQFFELLSRSFSCQQ-------IDWLPSEKS-APKAPSIGGPPSANQALEDVKIFEI 549
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: W2VXH4_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2VXH4_PHYPR) HSP 1 Score: 111 bits (277), Expect = 2.990e-22 Identity = 93/280 (33.21%), Postives = 129/280 (46.07%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMR-PGMMAVMAHRHRHPEDHEFFCRLNELFVVEEEKDPSFFAPWSSTEQPPTVIVESVDNGTGSKQQN-PNIQIFRI 2738
+L+AESPG LGIGGK+WDS VL YL R +L ++V+ELG+G GLV + C+LLGA V TD+EEV L+ N+ LNF + D S L PV L WG+P + P++IV+SDVVYDP GY PL+++L + P + +MAHR R+P +H+FF L++ F E+ W STE+ S G S +Q +++IF I
Sbjct: 193 ILLAESPGNLGIGGKLWDSCLVLTRYLAAR------------------------------REVLNEKQVVELGSGLGLVGIFCSLLGAR-VTLTDMEEVIPLLDYNIRLNF--------DEADSSAKGTVL--------------------------PVARAHL-WGDPPRD-LPLQPDVIVLSDVVYDPEGYAPLVSSLEALATAPQTLVLMAHRSRNPMEHQFFELLSQSFSCEQ-------IDWLSTEK--IAPKASAAGGPPSTEQALQDVKIFEI 396
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Match: A0A0W8CCQ7_PHYNI (Lysine methyltransferase METTL21D protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CCQ7_PHYNI) HSP 1 Score: 111 bits (277), Expect = 1.380e-21 Identity = 93/280 (33.21%), Postives = 129/280 (46.07%), Query Frame = 3
Query: 1905 VLVAESPGQLGIGGKVWDSAFVLCGYLVEASTIALERPFSVSANGPTKAVCRRSSLGTSGRRLLEGRRVLELGAGTGLVSVCCALLGASAVVATDLEEVTALIRANVALNFSHTLGLVLERTDDSKPPRCLSATSSPTKNASEAQVTAAAVACRARPPVTALPLAWGEPSDEGKAFDPELIVMSDVVYDPAGYEPLLATLLDMMR-PGMMAVMAHRHRHPEDHEFFCRLNELFVVEEEKDPSFFAPWSSTEQPPTVIVESVDNGTGSKQQN-PNIQIFRI 2738
+L+AESPG LGIGGK+WDS VL YL R +L ++V+ELG+G GLV + C+LLGA V TD+EEV L+ N+ LNF + D S L PV L WG+P + P++IV+SDVVYDP GY PL+++L + P + +MAHR R+P +H+FF L++ F E+ W STE+ S G S +Q +++IF I
Sbjct: 339 ILLAESPGNLGIGGKLWDSCLVLTRYLAAR------------------------------REVLNEKQVVELGSGLGLVGIFCSLLGAR-VTLTDMEEVIPLLDYNIRLNF--------DEADSSAKGTVL--------------------------PVARAHL-WGDPPRD-LPLQPDVIVLSDVVYDPEGYAPLVSSLEALATAPQTLVLMAHRSRNPMEHQFFELLSQSFSCEQ-------IDWLSTEK--IAPKASAAGGPPSTEQALQDVKIFEI 542 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2189.5780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2189.5780.1 >prot_H-paniculata_contig2189.5780.1 ID=prot_H-paniculata_contig2189.5780.1|Name=mRNA_H-paniculata_contig2189.5780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=896bp MASEGSDALEEYSAADSVDVAEKANGAGNACYREGHFEAACEFYTSAMAAback to top mRNA from alignment at H-paniculata_contig2189:6013..19862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2189.5780.1 ID=mRNA_H-paniculata_contig2189.5780.1|Name=mRNA_H-paniculata_contig2189.5780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13850bp|location=Sequence derived from alignment at H-paniculata_contig2189:6013..19862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2189:6013..19862+ >mRNA_H-paniculata_contig2189.5780.1 ID=mRNA_H-paniculata_contig2189.5780.1|Name=mRNA_H-paniculata_contig2189.5780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5376bp|location=Sequence derived from alignment at H-paniculata_contig2189:6013..19862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |