mRNA_H-paniculata_contig21852.5770.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21852.5770.1
Unique NamemRNA_H-paniculata_contig21852.5770.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 2.490e-73
Identity = 141/361 (39.06%), Postives = 201/361 (55.68%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESVASIY 1085
            F++VANVT+P  Y+ FL  V + N D+  I S GC +  +F+ RLL  T  PL+   LL +T+ +A+RR      ++ ++R +H+S+++LITFLVYSS S+TVFQ+FAC+ LDD ++YLRADYR+EC  +E       H+ + V+AG+M+ VYP+GIP  YG LL+                  R  + +D  +    P    +S                                DLW PYK  R +YEVIEC RR+ LTGV+VFIYP+T AQ+  T +IA  F   S  L PY    D  +S  GH+IV  SM+ AL+ KVDVSDE    +  +  VL  A+ C+++A+  E++   Y
Sbjct: 1448 FSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSE-------HQAFQVFAGIMILVYPVGIPLFYGYLLY---------------KHRRVLKSEDAGKRQTSPQVQPIS--------------------------------DLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFY 1754          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.740e-72
Identity = 150/363 (41.32%), Postives = 201/363 (55.37%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGC-YLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEV-RRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESVASIY 1085
            FAA ANVT+P  Y+ FLSA+ V N+DL  ++S GC +   +F+ RLL  T  PL+  G+L  T+ +A RR  +  ++++E+ R +H++VL+ +TFLVYSS SS VFQTFACD LDDG  YLRADYR+ C  ++       H    VYAGVMV VYP+GIP LY +LL                     F+  D +                                 +  +     +  LW+ YK +R +YEVIEC RR+MLTGV+VFIYP+  AQI  T LIA+ FFA  + L PY    D W+SR G ++V LSMF  L+LKVDVS E    +  Y  VL   +V + +AI+ E V   Y
Sbjct:  711 FAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSK-------HLALQVYAGVMVVVYPVGIPLLYAILL---------------------FQHRDILANA------------------------------SADKAGAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGICY 1015          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 1.100e-70
Identity = 137/357 (38.38%), Postives = 206/357 (57.70%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESV 1073
            F + ANVT+P  Y+ FL+ + VFN D++ ++S GC +  +F+ RLL  T  P++    L  T+    R    +A ++  V  RH+S+++L+ FLVYS  SS VFQTFACD L+ G  YLRADYR+EC  ++       H+ + VYAG M+ +YP+GIPA YG LL                                      L +RD+ ++      P  R+D   +     +++ +LW+PY+    +YEVIEC RR++LTG++VFIYP+T AQI  T ++ +VF   SEAL PY  A D WVSR  H +V +S++VAL+LKVDVS+E    +  ++ VL  A+ C+++A+  E++
Sbjct:  690 FTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSK-------HQGFRVYAGFMILLYPVGIPAFYGALL--------------------------------------LRDRDVLEK-----DPDGREDPPRV-----ASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETI 991          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 3.120e-70
Identity = 137/357 (38.38%), Postives = 204/357 (57.14%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESV 1073
            F + ANVT+P  Y+  L+ + VFN D++ I+S GC +  +F+ RLL  T  P++    L  T+    R    +A ++  V  RH+S+++L+ F+VYSS SS VFQTFACD L+ G  YLRADYR+EC  ++       H+ + VYAG M+ +YP+GIPA YG LL                     F + D +E                        P  R+D   +     +++ +LW+PY+    +YEVIEC RR++LTG++VFIYP+T AQI  T ++ +VF   SEAL PY  A D WVSR  H +V +S++VAL+LKVDVS+E    +  ++ VL  A+ C+++A+  E++
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSK-------HQGFRVYAGFMILLYPVGIPAFYGALL---------------------FRDRDVLEK----------------------DPDGREDPPRV-----ASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETI 2729          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 3.950e-70
Identity = 141/363 (38.84%), Postives = 201/363 (55.37%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHR-STMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVC----VLIAIAGESVA 1076
            F +VAN+ FP  Y+ FL A+++FN DL  ++S GC    +F+ RLL  T  P++    L   +  A R     +  +  V  +H+S+++L+TFLVY+S S+ +FQTFAC+ LDD + YLRADYR+EC       + P H  + VYAG M+ +Y +GIPALYG  L                     F + D                             LR+D+ + ++  R +   DLWKPY+    +YEVIEC RRV+L GV+VFIYP+T AQI    LIA+VF   SEAL PY    D W+ R GH +V +SM+VAL+LKVDVSDE    +  ++ +L  A+VC    VL+ +  E+++
Sbjct:  650 FTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIEC-------DSPKHSAFQVYAGFMIVLYTVGIPALYGGFL---------------------FRDSDV----------------------------LRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAIS 956          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 5.150e-70
Identity = 147/365 (40.27%), Postives = 199/365 (54.52%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGC-YLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDAN---SMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESVASIY 1085
            FA  ANV++P  Y+ FLSA+ V N DL  +++ GC +   +F+HRLL  T  PLI+   L +T+ IA  R  S A+   +  ++R +H + L+L+TFLVYSS SSTVFQTFAC+ LDDG  YLRADYR+ C  A        H  + V+AG M+ VYP+GIP LY +LL                     F+  D +        A+                               ++  LW+PY+ +R +YEV+EC RRVMLTGV+VFI+P+  AQI  T L A  FFA  E + PY+   D W+SR GH+IV  SMF  L+ KVDVSDE E  +  +  VL   +V +++AI  E V   Y
Sbjct:  714 FADAANVSYPGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHSAAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDA-------AHEAFEVFAGFMIFVYPVGIPLLYAVLL---------------------FQRRDVLADAGDDDKATAK-----------------------------SISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGICY 1021          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 5.450e-70
Identity = 145/357 (40.62%), Postives = 198/357 (55.46%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESV 1073
            F AVANVT+P  Y+ FL  + VFN DL+ ++S GC +  +F+ RLL  T  P++    L  T+  A R       ++  +  RH+S+++L+T  VYSS SST+FQTFAC+ L DG  YLRADYR+ C  ++       H+   VYAGVMV VY +GIPALYG+LL                     F + D ++            R   DR  T+   S  +               LWKPYK    +YEVIEC RRV+L GV+VFIYP+T  QI  T L+A  F   SE L PY    D W+SR GH +V +SM+VAL+LKVDVS+E    +  +++VL  A+ C+++ I  E+V
Sbjct: 1740 FTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSK-------HKALQVYAGVMVVVYTVGIPALYGVLL---------------------FRDRDVLK------------RSGADREETARVISTSE---------------LWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETV 2041          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 2.170e-69
Identity = 138/357 (38.66%), Postives = 205/357 (57.42%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVR-RRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGES 1070
            FA+ ANV +P  Y+ FL  +KVF  DL  ++S GC L   F+ RLLA T  P I   LLL   + A  R   +AN  + +   +H+ V +L+TFLVYSS SST+F+TFACD L+DG+ YLR DYR+EC  ++       H+++ VYAG M+ +YP+GIP LY +LL                     F++ + ++            +D  DR           D   ++     +  +LW+PYK    +YEVIEC RR++LTG++VFIYP+T AQ+  T ++A  F   SEA+ PY    + WV+R GH++V +SM+VAL+LKVDVSDE    +  ++ VL   + C+++++  E+
Sbjct: 1100 FASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGP-IFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSK-------HKVFQVYAGFMILLYPLGIPMLYSILL---------------------FKDREVLK------------KDKADR----------DDSARVK-----STSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVET 1400          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 3.100e-69
Identity = 141/361 (39.06%), Postives = 197/361 (54.57%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESVASIY 1085
            F +VANVT+P  Y+  L  + VFN DL+ ++S GC +  NF+ RLL  T  P++   LL  T+  A R    +   +  +  +H++V++L+TF VYSS SST+F+ FACD LD  + YLRADY +EC+ +E       HR   VYAG M+ +Y +GIPALY  LL+                 SR   +D+  +    P   S+S                                +LW+PYK    +YEVIEC RRV+L GV+VFIYP+T AQI  T LIA  F   SE L PY    D W+SR GH++V LSM+VAL+LKVDVSDE    +  ++ VL   +VC+++ +  E+    +
Sbjct: 1185 FTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSE-------HRGIQVYAGFMIVIYTVGIPALYAELLF----------------KSRDVLKDEDPDREEPPRVKSIS--------------------------------NLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAW 1490          
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 4.370e-69
Identity = 139/357 (38.94%), Postives = 204/357 (57.14%), Query Frame = 3
Query:    3 FAAVANVTFPPYYEAFLSAVKVFNLDLTQIVSWGCYLRTNFYHRLLAITTVPLILGGLLLVTFWIAQRRYLSDANSMMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLECHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGPLVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDINIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQIGTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDVSDEPEVGEGTYDIVLTGANVCVLIAIAGESV 1073
            F  VANVT+P  Y+ FL+ ++VFN DL+ ++S GC +  +F+ RLL  T  P+    LL+ T+  A R +     ++  VR +H+ +++L+TF VYSS S+T+F+TFAC+ L+DG+ YL ADYR+EC  ++       H+ + VYAG MV +Y  GIPALY  LL                     F + D ++          + +DL  RA TS S                   DLWKPYK    +YEV+EC RRV+L GV+VFIYP++ AQI  T ++A  F   SE L PY    D W++R GH++V+ SM++AL+LKVDVS E    +G ++ VL  A+V +++    E++
Sbjct: 1284 FTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSK-------HKRFEVYAGFMVLLYTAGIPALYSFLL---------------------FRDRDVLKGRE------AAGQDLRSRA-TSTS-------------------DLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETL 1586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21852.5770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY65_9PHAE2.490e-7339.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI1.740e-7241.32Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FHH1_ECTSI1.100e-7038.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI3.120e-7038.38LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2Z8_ECTSI3.950e-7038.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX12_9PHAE5.150e-7040.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI5.450e-7040.62Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI2.170e-6938.66Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K0E9_9PHAE3.100e-6939.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSC0_ECTSI4.370e-6938.94Polymorphic Outer membrane protein G/I family n=3 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21852contigH-paniculata_contig21852:666..2251 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.2
Seed ortholog evalue3.4e-49
Seed eggNOG ortholog2880.D7FHG7
KEGG koko:K03514,ko:K11700
KEGG Pathwayko03018,map03018
KEGG ModuleM00393
Hectar predicted targeting categorysignal peptide
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005844,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007080,GO:0008150,GO:0008152,GO:0008608,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0022402,GO:0030702,GO:0030880,GO:0031047,GO:0031048,GO:0031123,GO:0031124,GO:0031134,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031379,GO:0031380,GO:0032991,GO:0034641,GO:0035770,GO:0036464,GO:0040029,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050000,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060293,GO:0061695,GO:0065007,GO:0070566,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140014,GO:1901360,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1990141,GO:1990234,GO:1990758,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.RNA uridylyltransferase activity
EggNOG OGsCOG5260@1,KOG1906@2759
EC2.7.7.19
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03036
Exons2
Model size1362
Cds size903
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21852.5770.1prot_H-paniculata_contig21852.5770.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21852 895..2021 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.9143248-UTR-H-paniculata_contig21852:665..8941622929595.9143248-UTR-H-paniculata_contig21852:665..894Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21852 666..894 -
1691480928.6786187-UTR-H-paniculata_contig21852:665..8941691480928.6786187-UTR-H-paniculata_contig21852:665..894Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21852 666..894 -
1622929595.9640198-UTR-H-paniculata_contig21852:2021..22511622929595.9640198-UTR-H-paniculata_contig21852:2021..2251Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21852 2022..2251 -
1691480928.7126794-UTR-H-paniculata_contig21852:2021..22511691480928.7126794-UTR-H-paniculata_contig21852:2021..2251Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21852 2022..2251 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.9297693-CDS-H-paniculata_contig21852:894..17881622929595.9297693-CDS-H-paniculata_contig21852:894..1788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21852 895..1788 -
1691480928.6913667-CDS-H-paniculata_contig21852:894..17881691480928.6913667-CDS-H-paniculata_contig21852:894..1788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21852 895..1788 -
1622929595.9445093-CDS-H-paniculata_contig21852:2012..20211622929595.9445093-CDS-H-paniculata_contig21852:2012..2021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21852 2013..2021 -
1691480928.7024543-CDS-H-paniculata_contig21852:2012..20211691480928.7024543-CDS-H-paniculata_contig21852:2012..2021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21852 2013..2021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21852.5770.1

>prot_H-paniculata_contig21852.5770.1 ID=prot_H-paniculata_contig21852.5770.1|Name=mRNA_H-paniculata_contig21852.5770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp
MMEVRRRHLSVLILITFLVYSSASSTVFQTFACDPLDDGRRYLRADYRLE
CHQAEAGKEVPVHRMYMVYAGVMVAVYPIGIPALYGLLLWWAWRRAASGP
LVRGITPSRPFEEDDTIETTRQPSWASLSERDLPDRAPTSVSPSLRQDDI
NIQEHHRSTMRDLWKPYKQDRIFYEVIECTRRVMLTGVIVFIYPDTVAQI
GTTFLIALVFFAASEALDPYEDAQDCWVSRFGHLIVLLSMFVALMLKVDV
SDEPEVGEGTYDIVLTGANVCVLIAIAGESVASIYYPTSFVGGVVDFSDD
*
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mRNA from alignment at H-paniculata_contig21852:666..2251-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21852.5770.1 ID=mRNA_H-paniculata_contig21852.5770.1|Name=mRNA_H-paniculata_contig21852.5770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1586bp|location=Sequence derived from alignment at H-paniculata_contig21852:666..2251- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTTTGCTGCAGTCGCGAACGTGACGTTCCCACCTTATTACGAGGCCTTT CTCAGCGCGGTCAAGGTGTTCAATCTTGATCTGACCCAAATCGTGTCTTG GGGTTGCTACTTGCGTACGAACTTCTATCACCGTCTACTGGCCATCACGA CTGTACCCCTGATACTCGGTGGACTTCTGTTGGTGACATTCTGGATTGCT CAGCGTCGATACTTGAGTGATGCGAATAGCATGATGGAGGTAAGAAATGG TTTATGTTGTGAAGTTACACCCAGCCGCATAGCTTTGGATCTATCATGAT GCCACGTATGATTCAAAAACGTTCAGATACCTGACTGATCTCTCAATTGA CACGAGCGTCACCGATATCGCGCCATCTCCATAAAAACATCATTCCCCCC GACCGCTGCCGTTACCTCCATACCGACCGTCTCCTCCACGCACGCTCGAC ATCGTTTCGTCAGGTTCGACGACGACATTTATCGGTGCTCATATTGATCA CGTTCCTCGTTTACTCATCGGCATCTTCGACCGTATTCCAAACCTTCGCG TGTGACCCTCTCGACGATGGCCGGCGTTACCTGAGGGCGGATTACCGGCT AGAGTGCCACCAGGCTGAGGCCGGAAAAGAAGTCCCTGTACACCGAATGT ATATGGTGTACGCTGGAGTGATGGTTGCAGTGTACCCGATCGGCATCCCT GCGTTGTATGGGCTTCTGCTATGGTGGGCTTGGCGTCGAGCGGCGTCTGG GCCTTTGGTACGGGGTATTACACCTAGCCGACCGTTCGAAGAGGACGATA CGATCGAGACCACAAGACAGCCGTCGTGGGCCTCGCTGAGCGAACGAGAT CTGCCAGACAGAGCTCCAACCTCAGTGTCCCCGTCGCTGAGACAGGACGA CATTAACATTCAAGAACACCACAGGTCTACGATGCGAGACCTATGGAAGC CTTACAAACAAGATCGAATCTTTTACGAGGTAATAGAGTGCACACGCCGC GTGATGCTCACGGGAGTCATCGTGTTTATTTATCCGGACACGGTCGCCCA AATTGGTACAACGTTTTTGATAGCGCTCGTGTTTTTTGCGGCTTCCGAAG CGCTTGATCCTTACGAAGACGCGCAAGATTGCTGGGTGTCAAGATTTGGA CACTTGATTGTTCTGTTGAGCATGTTCGTTGCTCTAATGCTGAAAGTTGA TGTGAGCGATGAACCAGAAGTGGGGGAAGGTACGTACGATATCGTTCTCA CAGGCGCAAATGTCTGCGTACTGATCGCCATTGCGGGCGAGTCTGTGGCT TCAATATACTATCCCACTAGCTTCGTCGGCGGTGTGGTAGACTTCAGTGA TGACTAGTATCGTTCTGGGTGCTGGTGGTGCGGCTGTTGTGACACATCAT GAAAATGGTCGGCAGGACTTTTGAGTAGTGTGGGACTTTCCCTGGCTACT GTGTTGTTGCTCATTCATTGAGCGCAGAATGAGTACAAGCTGGGCCGGCC AAGAAACCAACAATTCGTCAGATGGTCGTATCTCTGCTTCTGCTTTGTTG TTTCTCAAACCACAGACACCGCTGCGATCGTTAAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig21852:666..2251-

>mRNA_H-paniculata_contig21852.5770.1 ID=mRNA_H-paniculata_contig21852.5770.1|Name=mRNA_H-paniculata_contig21852.5770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at H-paniculata_contig21852:666..2251- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGAGATGATGGAGGTTCGACGACGACATTTATCGGTGCTCATATT
GATCACGTTCCTCGTTTACTCATCGGCATCTTCGACCGTATTCCAAACCT
TCGCGTGTGACCCTCTCGACGATGGCCGGCGTTACCTGAGGGCGGATTAC
CGGCTAGAGTGCCACCAGGCTGAGGCCGGAAAAGAAGTCCCTGTACACCG
AATGTATATGGTGTACGCTGGAGTGATGGTTGCAGTGTACCCGATCGGCA
TCCCTGCGTTGTATGGGCTTCTGCTATGGTGGGCTTGGCGTCGAGCGGCG
TCTGGGCCTTTGGTACGGGGTATTACACCTAGCCGACCGTTCGAAGAGGA
CGATACGATCGAGACCACAAGACAGCCGTCGTGGGCCTCGCTGAGCGAAC
GAGATCTGCCAGACAGAGCTCCAACCTCAGTGTCCCCGTCGCTGAGACAG
GACGACATTAACATTCAAGAACACCACAGGTCTACGATGCGAGACCTATG
GAAGCCTTACAAACAAGATCGAATCTTTTACGAGGTAATAGAGTGCACAC
GCCGCGTGATGCTCACGGGAGTCATCGTGTTTATTTATCCGGACACGGTC
GCCCAAATTGGTACAACGTTTTTGATAGCGCTCGTGTTTTTTGCGGCTTC
CGAAGCGCTTGATCCTTACGAAGACGCGCAAGATTGCTGGGTGTCAAGAT
TTGGACACTTGATTGTTCTGTTGAGCATGTTCGTTGCTCTAATGCTGAAA
GTTGATGTGAGCGATGAACCAGAAGTGGGGGAAGGTACGTACGATATCGT
TCTCACAGGCGCAAATGTCTGCGTACTGATCGCCATTGCGGGCGAGTCTG
TGGCTTCAATATACTATCCCACTAGCTTCGTCGGCGGTGTGGTAGACTTC
AGTGATGACTAGGTTCGACGACGACATTTATCGGTGCTCATATTGATCAC
GTTCCTCGTTTACTCATCGGCATCTTCGACCGTATTCCAAACCTTCGCGT
GTGACCCTCTCGACGATGGCCGGCGTTACCTGAGGGCGGATTACCGGCTA
GAGTGCCACCAGGCTGAGGCCGGAAAAGAAGTCCCTGTACACCGAATGTA
TATGGTGTACGCTGGAGTGATGGTTGCAGTGTACCCGATCGGCATCCCTG
CGTTGTATGGGCTTCTGCTATGGTGGGCTTGGCGTCGAGCGGCGTCTGGG
CCTTTGGTACGGGGTATTACACCTAGCCGACCGTTCGAAGAGGACGATAC
GATCGAGACCACAAGACAGCCGTCGTGGGCCTCGCTGAGCGAACGAGATC
TGCCAGACAGAGCTCCAACCTCAGTGTCCCCGTCGCTGAGACAGGACGAC
ATTAACATTCAAGAACACCACAGGTCTACGATGCGAGACCTATGGAAGCC
TTACAAACAAGATCGAATCTTTTACGAGGTAATAGAGTGCACACGCCGCG
TGATGCTCACGGGAGTCATCGTGTTTATTTATCCGGACACGGTCGCCCAA
ATTGGTACAACGTTTTTGATAGCGCTCGTGTTTTTTGCGGCTTCCGAAGC
GCTTGATCCTTACGAAGACGCGCAAGATTGCTGGGTGTCAAGATTTGGAC
ACTTGATTGTTCTGTTGAGCATGTTCGTTGCTCTAATGCTGAAAGTTGAT
GTGAGCGATGAACCAGAAGTGGGGGAAGGTACGTACGATATCGTTCTCAC
AGGCGCAAATGTCTGCGTACTGATCGCCATTGCGGGCGAGTCTGTGGCTT
CAATATACTATCCCACTAGCTTCGTCGGCGGTGTGGTAGACTTCAGTGAT
GACTAG
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