mRNA_H-paniculata_contig2185.5769.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI) HSP 1 Score: 984 bits (2544), Expect = 0.000e+0 Identity = 569/688 (82.70%), Postives = 585/688 (85.03%), Query Frame = 1
Query: 1 MALNVPPAMTQAPTQGQQGQG-----------NTAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVF----EGEEAKEKGTEGKSRC--FGFVNFEDHESAVKAIESLNGTELADGEGSTQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNG-QSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYGMPYWMG-QPGMXXXXXXXXXXXXXPRGXXGPMPAYGGRGNYPXXXXATAGQ---MPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGP--------VPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQQETS 1965
MALN PPAMTQAP QG N AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYE GVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP SWDDAKLREEFEKHG VTSCKVQV +G+E+KEK FGFVNFE+HESAVKAIE+LN E+ DGEG+T LYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVTE+AMREAFA YGTITSARVMVD SN QSKGFGFVCFSAPEEATKAI+EMNGKML+NKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA QGMYGMPYWMG QPGM PRG GPMPAYGGRGNYP AT GQ MPGQPQPRRGAGPRQQ XXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQ PXXXX TNESL+AAALAAAPPEKQKNMIGERLYPLI+EGQP LAGKITGMLLEMDNGELLHLLESPD+L AKINEALQVLSEHQQE +
Sbjct: 1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQENN 688
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA) HSP 1 Score: 702 bits (1811), Expect = 4.950e-238 Identity = 411/657 (62.56%), Postives = 463/657 (70.47%), Query Frame = 1
Query: 73 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEGST-QLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYGM--PYWM-GQPGMXXXXXXXXXXXXXP---------RGXXGPMPAYGGRGNYPXXXXATAGQMP-------------GQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTN--ESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEH 1950
+ P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDDAG SKGYGYVHYET SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G + S K+Q + A SR FGF+NFEDHE+A A+ +NG ++ T +L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V E A+REAFA GTITS R+M D G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM GMYGM PY M GQPG P RG M Y GRG YP A G MP G PQ + G QQ GNFKYTQ VRN PP Q Q P XXX XXXXXXX ESLTA ALAAA PE QKNMIGERLYPLIHE QP+LAGKITGMLLEMDNGELLHLLESPD+L+AKI EALQVL H
Sbjct: 57 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPAS------LSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAM-GAMPVQQXXXXXXGASGGAPQQAQAGGVPQQ------------------------------GNFKYTQQVRN--------PPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN) HSP 1 Score: 625 bits (1613), Expect = 5.360e-209 Identity = 374/663 (56.41%), Postives = 433/663 (65.31%), Query Frame = 1
Query: 70 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEGS-TQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYGM-PYWMGQPGMXXXXXXXXXXXXXPR----------------------GXXGPMPAYGGRGNYPXXXXATAGQMPGQPQPRR-GAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQ------PGAPN---MPPQQQQGP-VPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQ 1953
A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYET +AN AIAKINGMLIAG +V+VGHF +R R +WTN YVK +P+ W + ++R+EFE G V S V K+ G E + FGFVNFE E A KA+E+LNG + +GS +LY RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +T+E +REAF +GTITS+R+M D + G S+GFGFVCFS PEEA KA++EMNGK++ KP+YVALAQR+EVRR QLEAQ AQR G+ RG+PM MYG P + QP X G MPAYG Q GQP+ RR G GP R NFKYT VRNQ PGAP MPP P VP E LT+AALAAA PE QKNMIGERLYPLIH QP+LAGKITGMLLEMDNGELLHLLESP+AL+AKI EA+QVL HQ
Sbjct: 21 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVM-------KDAGAE-HHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRD-TAGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGYMPAYG-----------MPMQPRGQPRGRRQGPGP----------------------AGPQAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPGVMPPAAPVQPGVPHL---------------EPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 626
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA) HSP 1 Score: 625 bits (1613), Expect = 8.090e-209 Identity = 393/642 (61.21%), Postives = 459/642 (71.50%), Query Frame = 1
Query: 79 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDD--AGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGK-SRCFGFVNFEDHESAVKAIESLNGTELADGEGST-QLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYG-MPYWMGQPGMXXXXXXXXXXXXXPRGXXGPMPAYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQG----VRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQQETSA 1968
P+HSASLYVGDL+ DV+EA LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV A DD + E +GYGYVHYET +AN AIAKINGMLIAGK+V+VGHFV+R +RA +DWTNLY+K +PE W + KL +EF K G VTS K + + + +E K + +GFVN+ DHESAVKA+E++NG +L +G ++Y RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +T+E +RE F YGTITSARVM D SNG S+GFGFVC+SAPEEATKA+SE NGK++ KP+Y+ALAQRREVRR QLEAQ+A+ G +PPRG+P+ GMYG MP + PG +P RG YP MP XXXXXXXX XXXXXXXX GR G V QQPG + P PVPXXXXXX XXXXXXX AALAAA PE+QKNMIGERLYPLI + QP+LAGKITGMLLEMDNGELLHLLESP+AL KI EAL VL +H + +A
Sbjct: 11 PFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGEEREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRD-SNGNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMYGAMPMYAMPPGQG-------------------IPPQASRG-YP--------MMPAMMXXXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRPGAM--PVPXXXXXXXXXXXXXXXXXXX---AALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQMAA 618
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA) HSP 1 Score: 622 bits (1605), Expect = 4.040e-207 Identity = 395/637 (62.01%), Postives = 450/637 (70.64%), Query Frame = 1
Query: 70 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEG-STQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYGM-PYWMGQPGMXXXXXXXXXXXXX---PRGXX-GPMPAYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQ 1953
A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYET +A AIAKINGMLIAG +V VGHF +R +R DWTN YVK +P W DA L +EFE G V S V K+ ++R FGFVN+ED ESA KA+++LNG GEG T++Y +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +T++ +REAFA+ GTITS+RVM D NG S+GFGFVCFS PEEA KA++EMNGK++ KP+YVALAQR+EVRR QLEAQ AQ R GM RG+PM MYG P + GQPG PRG GP+P YG R XXXX XXXXXXXXXXXXXXXXXXXXXX R NFKYT RN A + PPQ G +P A E LT+AALAAA PE QKNMIGERLYPLIH QP+LAGKITGMLLEMDNGELLHLLESP+AL+AKI EAL VL HQ
Sbjct: 71 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVM-------KDNANPEQNRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGARVPXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--ARDAPPQ---GVMPPAAPVQNAGP-------EPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA) HSP 1 Score: 620 bits (1598), Expect = 4.340e-206 Identity = 368/636 (57.86%), Postives = 433/636 (68.08%), Query Frame = 1
Query: 67 TAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEG-STQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYGM-PYWMGQPGMXXXXXXXXXXXXXPRGXXGPMPAYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQQE 1959
T+ P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYET +A AIAKINGMLIAG +V VGHF +R +R +WTN YVK +P++WDD LR+EFE G ++SC V K+ +E ++R FGFVNFE+ E+A +A E LN ++ +G +LY +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +T+E +REAFA GTITS R+M D + G S+GFGFVCF+ PEEATKA++EM+GK++ KPIYVALAQR+EVRR QLEAQ AQ+ TGM RG+PM MYG P + QP G +P RG P G G P+ XXXXXXXXX R NFKYT RNQ P +P QQ G +P E LT+AALAAA P QKNMIGERL+PLIH QP+LAGKITGMLLEMDNGELLHLLESPDAL AKI EAL VL HQ E
Sbjct: 66 TSATPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM-------KDASSE-QNRGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDPA-GNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLP----RGPIPYRQPGVPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPVQEPVP--QQPGGIPQM---------------EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSE 671
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE) HSP 1 Score: 616 bits (1588), Expect = 3.490e-205 Identity = 391/655 (59.69%), Postives = 454/655 (69.31%), Query Frame = 1
Query: 19 PAMTQAPTQGQQGQGNTAIA-PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEG-STQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYGM-PYWMGQPGMXXXXXXXXXXXXX---PRGXX-GPMPAYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQ 1953
P++T AP A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYET +A AIAKINGMLIAG +V VGHF +R +R DWTN YVK +P W DA L +EFE G V S V K+ ++R FGFVN++D +SA +A+++LNG G+G T +Y +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++++ +REAF + GTITS+RVM D NG S+GFGFVCFS PEEA KA++EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM RG+PM MYG P + GQPG PRG GP+P YG R +PG XXXXXXXXXXXXXXXXXXXXXX R NFKYT RN A MPPQ G +P A E LT+AALAAA PE QKNMIGERLYPLIH QP+LAGKITGMLLEMDNGELLHLLESP+AL+AKI EAL VL HQ
Sbjct: 12 PSLTAAPXXXXXXXXXXGAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVM-------KDNANPDQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR-------------VPGXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--AREMPPQ---GVMPPAAPVQNAGP-------EPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA) HSP 1 Score: 613 bits (1582), Expect = 3.870e-204 Identity = 374/646 (57.89%), Postives = 439/646 (67.96%), Query Frame = 1
Query: 64 NTAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELA--DGEGSTQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQG-MYGM-PYWMGQPGMXXXXXXXXXXXXX---PRGXX--GPMP-----AYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQQE 1959
+ A P+H+ASLYVGD+ +V EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYET +A +AI KINGMLIAG +V VGHF +R+NR +DWTN Y+K +P +WDDAKLR EFE G ++SC V + T +R FGFVNFE+ E+A +A + LNG +A D +LY +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +T+E +REAF GTITSAR+M D + G S+GFGFVCF+ PEEATKA+++++GK+L KPIYVALAQR+EVRR QLEAQ AQ+ + RGLP+ Q MYG P + QP PRG GP+P GG G Y MP XXXX XXXXXXXXXXX R NFKYT RNQ P Q+Q P P T E LT+AALAAA P QKNMIGERL+PLIH QP+LAGKITGMLLEMDNGELLHLLESPDAL AKI EAL VL H+ E
Sbjct: 26 SAAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM--------KDTTSENNRGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRDPA-GASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGY---------GMPQYXXXXXXXXXXXXXXXXXGPPGQLAGPPXXXXXXXXXXXQNNRNNFKYTANARNQ-------PSLQEQAPQPAAPAVAAGVP-----TLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETE 641
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD) HSP 1 Score: 607 bits (1565), Expect = 8.910e-202 Identity = 388/660 (58.79%), Postives = 443/660 (67.12%), Query Frame = 1
Query: 19 PAMTQAPTQGQQGQGNTAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEGST-QLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFA-QRTGMPP-RGLPMAGQGMYGM-PYWMGQPGMXXXXXXXXXXXXX---PRGXXGPMPAYGGRGNYPXXXXATAGQMPGQPQPRRGAGPRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQP-------GAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQ 1953
P + A T G A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+ G SKGYGYVHYET +A+ AIAKINGMLIAG +V VGHF +R +R DWTN YVK +P W D L +EF+ GPV S + E +R FGFVNFE+ E A KA+E+LNG +GS +LY +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ + ++ +REAFA GTITS+RVM D NG S+GFGFVCFS PEEA KA++EMNGK++ KP+YVALAQR+EVRR QLEAQ A QR G+ RGLPM MYG P + QP PRG XXXX XXXXXXXXXXXXXXXXXXXXX R NFKYT VRNQ P GAP P Q GP P LT+AALAAA P+ QKNMIGERLYPLIH QP+LAGKITGMLLEMDNGELLHLLESP+AL+AKI EA+QVL HQ
Sbjct: 8 PTNSPATTAASSATGAAAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEVFVGHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIMRDADAEL--------NRGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRD-QNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPMGQPPMYGAAPMFYTQPNQMPPQARQGFVYPQQMLPRGVHXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXQGPGAVNRRNFKYTANVRNQPPREGAPAPGAPPAAPVQVGGPEP-------------------LTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 629
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA) HSP 1 Score: 606 bits (1562), Expect = 1.140e-200 Identity = 356/638 (55.80%), Postives = 410/638 (64.26%), Query Frame = 1
Query: 73 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGPVTSCKVQVFEGEEAKEKGTEGKSRCFGFVNFEDHESAVKAIESLNGTELADGEG-STQLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTEEAMREAFAQYGTITSARVMVDGSNGQSKGFGFVCFSAPEEATKAISEMNGKMLMNKPIYVALAQRREVRRTQLEAQFAQR-TG-MPPRGLPMAGQGMYGMPYWMGQPG---MXXXXXXXXXXXXXPRGXXGPMPAYGGRGNYPXXXXATAGQMPGQPQPR----RGAG-PRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQQQGPVPXXXXXXQAXXXXXXXTNESLTAAALAAAPPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPDALQAKINEALQVLSEHQ 1953
+ P+ +ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHN+ DAERALDTMNFT IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G+SKGYGYVHYET +A AI KINGMLIAG +V VGHF +R R DWTN YVK LP W DA LR EFE G V S V + +R FGFVN+ED + A A+E L+G G +LY +AQK++ER+REL+ K +Q+K+ER+NK+QGVN+YVKNLD+ + +E +REAF YGTITSARVM D S G S+GFGFVCFS PEEA A++EMNGK++ KP+YVA AQR+EVRR QLEAQ AQR TG + RG+PM MYG P + QP M PRG +P G+MPG P P G G P QQ+ R NFKYT G RN P + G +P E LT+AALAAA PE QKNMIGERLYPLIH Q +LAGKITGMLLEMDN ELLHLLESPDAL +KI EA+QVL HQ
Sbjct: 70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVM--------KDPNSATNRGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRD-STGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPMGQPPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGV------------HPRVPFGFGGRMPGAPGPAGFSMAGYGMPMQQQRQPRRGRQVPGPAGAPNGMPN-------RRNFKYTTGARNH-PSREGLGNNMSGGVMPQGSSTPMGGAPAL----EPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAHQ 674 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2185.5769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2185.5769.1 >prot_H-paniculata_contig2185.5769.1 ID=prot_H-paniculata_contig2185.5769.1|Name=mRNA_H-paniculata_contig2185.5769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=658bp MALNVPPAMTQAPTQGQQGQGNTAIAPYHSASLYVGDLSKDVAEATLFEIback to top mRNA from alignment at H-paniculata_contig2185:701..13459- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2185.5769.1 ID=mRNA_H-paniculata_contig2185.5769.1|Name=mRNA_H-paniculata_contig2185.5769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12759bp|location=Sequence derived from alignment at H-paniculata_contig2185:701..13459- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2185:701..13459- >mRNA_H-paniculata_contig2185.5769.1 ID=mRNA_H-paniculata_contig2185.5769.1|Name=mRNA_H-paniculata_contig2185.5769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3948bp|location=Sequence derived from alignment at H-paniculata_contig2185:701..13459- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |