mRNA_H-paniculata_contig218.5766.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig218.5766.1
Unique NamemRNA_H-paniculata_contig218.5766.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.220e-80
Identity = 133/223 (59.64%), Postives = 160/223 (71.75%), Query Frame = 1 
Query:   97 EFIRSSFYPVLPRSCVAHFSTTLLVMSTETGETLSRGELLRHVSAACLGGG--WMLTAAASGVVAKTPVMRLPDEDSTTAATGYAGNADAVVPPFTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINSRSTEPLTFEVKVTKVR 759
            + +  +F P          +T L + S+   E +SRGE+LR V+AAC+ G   W  TA      A  PVM+LPD+DS   A    G     +PPFT LPSG+QITDI  G GP A  GKGV ++WV+RR NGYYVS+S EG GEPFIYRVGD KRAIKG D+GI+GM++GGTRRIVVPP+L YVEGCKDGNPGPIP+GLGPKQQIN+R+ EPLTFEVK+TKVR
Sbjct:   14 QLVTHAFVPATFPHLGVRRATGLRMCSSPADEGMSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPDDDSAKPALRSGGEGS--IPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.090e-44
Identity = 78/143 (54.55%), Postives = 107/143 (74.83%), Query Frame = 1 
Query:  337 GYAGNADAVVPPFTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINSRSTEPLTFEVKVTKVR*R 765
            G +G+ +  +P F  LPSG++ITDI+VG+G E + G  V +QWVLRR NGY+V +S   + +PFIYRVGD ++AIKGFDEGI+GM+ GG RR++VPP+L YV+G  D  PGP+P G GP++Q+ +R  EP  FEV+V+ VR R
Sbjct:  208 GLSGDENPNLPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVRDR 350
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.580e-36
Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = 1 
Query:  382 LPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQ-------INSRSTEPLTFEVKVTKV 756
            LPSG+   D++ GSG   + GK V VQWVL+R NGY+V +SS  DG PFI+ VGD K A+ G DEGI+GM+ GG RRI+VPP LAYVEG +DG PGPIP G GPKQ+       +     E +  +VK T+V
Sbjct:  106 LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRMRRVMLLLKDIPGEYIVVDVKATRV 237
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.400e-34
Identity = 68/134 (50.75%), Postives = 91/134 (67.91%), Query Frame = 1 
Query:  382 LPSGLQITDIKVGSGPE-AQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINS----RSTEP---LTFEVKVTKVR 759
            LPSG+   D++VGSG E A  G  V +QWVLR+ NGY+V +S   DG PFI+ VGD+  AI G DEGI+GM+ GG RR+++PPK AYV G +DG PGP+P G GPKQQ+      R   P   +  E+++T++R
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 147
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S2E4F5_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4F5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 5.560e-34
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 1 
Query:  292 PVMRLPDEDSTTAATGYAGNADAVVP--PFTTLPSGLQITDIKVGSGPE-AQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINS----RSTEP---LTFEVKVTKVR 759
            P   LP+E     A     +ADA +P   +  LPSG+   D++VGSG E A  G  V +QWVLR+ NGY+V +S   DG PFI+ VGD+  AI G DEGI+GM+ GG RR+++PPK AYV G +DG PGP+P G GPKQQ+      R   P   +  E+++T++R
Sbjct:  157 PKKSLPEEYRQGTAALADMDADAPIPREAYKKLPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 322
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 136 bits (342), Expect = 3.570e-33
Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 1 
Query:  373 FTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINS----RSTEP---LTFEVKVTKVR 759
            +  L SG+   DI  GSG   + G  V +QWVLRR NGY+V +S+  D  PFI+ VGD K AI G D+ ++GM+ GGTRRI++PPKLAYV G  DG PGPIP G GP+QQ+      R   P   +  EVK+TKVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: K0T7Z6_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T7Z6_THAOC)

HSP 1 Score: 133 bits (335), Expect = 2.470e-32
Identity = 76/163 (46.63%), Postives = 100/163 (61.35%), Query Frame = 1 
Query:  301 RLPDEDSTTAATGYAGNADAVVPP---FTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINSRST-------EPLTFEVKVTKVR 759
            +L +E  T      + + +A V P   +  L SG+   DI  GSG E   GK + VQW+LRR NGY+V +S+  D  PFI+ VG +  AIKG DEG+ GM+ GGTRRI++PP LA+V+G  DG PGP+P G GP+QQ+    T       E +  EVKVTKVR
Sbjct:   88 QLSEEYLTDGTAAMSESVEAEVLPREAYNKLDSGVIYADISKGSGEEVVPGKRLNVQWILRRSNGYFVDSSAVSDSVPFIFTVG-KGDAIKGVDEGVLGMRGGGTRRILIPPSLAWVQGIDDGKPGPLPAGFGPRQQMRRVMTLRADVPGEYIFLEVKVTKVR 249
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S3L467_9STRA (Peptidylprolyl isomerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L467_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.990e-31
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:  382 LPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQINSRST-------EPLTFEVKVTKVR 759
            LPSG+   D++ G G   Q G  V +QWVLR+ NGY+V +S+     PFI+ VGD   AIKG DEGI+G+Q GG RRI++PP LAYV+G +DG PGP+P G GP+QQ+    T       E +  EV+ T+VR
Sbjct:   93 LPSGVIYADLRPGKGATVQEGSKVNIQWVLRKSNGYFVDSSAVQGDVPFIFTVGDGT-AIKGVDEGIRGIQEGGVRRILMPPSLAYVDGLEDGKPGPLPAGFGPRQQMRRVQTVRKDVPGEYVFLEVQATRVR 224
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S1BQK4_9STRA (Peptidylprolyl isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQK4_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.180e-30
Identity = 63/134 (47.01%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:  382 LPSGLQITDIKVGSGPEA--QLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQIN------SRSTEPLTFEVKVTKVR 759
            LPSGL   D ++G+  +A  + G  V +QWVLR+ NGY+V +S+     PF++ VG E  AI G DEG++GM+AGG RR+++PP+LAYV+G +DG+PGP+PVG GP+QQ+           E L  EV++T++R
Sbjct:  100 LPSGLAYADARLGTKGDAVAKAGDKVNLQWVLRKSNGYFVDSSAVAGDVPFVFVVGSEGGAIAGVDEGVRGMRAGGIRRLLIPPRLAYVDGLEDGSPGPVPVGYGPRQQMRRVMLKKDVQDEYLYLEVQLTRIR 233
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BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Match: A0A7S3V5L2_9STRA (Peptidylprolyl isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5L2_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.050e-28
Identity = 74/172 (43.02%), Postives = 94/172 (54.65%), Query Frame = 1 
Query:  277 VVAKTPVMRLPDEDSTTAATGYAGNADAVVPPFTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVLRRMNGYYVSASSEGDGEPFIYRVGDEK-----RAIKGFDEGIKGMQAGGTRRIVVPPKLAYVEGCKDGNPGPIPVGLGPKQQIN-------SRSTEPLTFEVKVTKV 756
            V+A T    +P  DS   A     NA   V   T LPSG+   D++ G G     GK V +QW L+R NGY + +S+  DG PFI+ VG+       RAIKG DEGI+GM  GG RRIV+PP   + EG  +G+PGPIP G GPKQ+I            E    +VK T+V
Sbjct:  373 VMALTVGSMVPLTDSVRVANAMYENAPVGVSEITKLPSGVSYQDLRQGDGDVVSEGKRVNIQWSLKRSNGYIIDSSASNDGVPFIFVVGNTNKDAGNRAIKGLDEGIRGMNVGGIRRIVMPPSQTFTEGLGEGSPGPIPPGFGPKQRIERVMKLRADVPDESFLLDVKPTRV 544
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig218.5766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI1.220e-8059.64Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA1.090e-4454.55Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S4J203_9STRA2.580e-3653.79Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
A0A7S2E2F1_9STRA1.400e-3450.75Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A7S2E4F5_9STRA5.560e-3446.39Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
B8C0A9_THAPS3.570e-3351.47Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
K0T7Z6_THAOC2.470e-3246.63Peptidylprolyl isomerase n=1 Tax=Thalassiosira oce... [more]
A0A7S3L467_9STRA8.990e-3149.62Peptidylprolyl isomerase n=1 Tax=Amphora coffeifor... [more]
A0A7S1BQK4_9STRA2.180e-3047.01Peptidylprolyl isomerase n=1 Tax=Corethron hystrix... [more]
A0A7S3V5L2_9STRA3.050e-2843.02Peptidylprolyl isomerase n=1 Tax=Chaetoceros debil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig218contigH-paniculata_contig218:38443..42772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.5
Seed ortholog evalue3.1e-67
Seed eggNOG ortholog2880.D7FIZ9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
Ec32 ortholog descriptionPlastid FKBP domain protein
Ec32 orthologEc-07_004980.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1465
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.2606323-UTR-H-paniculata_contig218:38442..386131622929595.2606323-UTR-H-paniculata_contig218:38442..38613Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig218 38443..38613 +
1691480928.4405355-UTR-H-paniculata_contig218:38442..386131691480928.4405355-UTR-H-paniculata_contig218:38442..38613Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig218 38443..38613 +
1622929595.360022-UTR-H-paniculata_contig218:42069..427721622929595.360022-UTR-H-paniculata_contig218:42069..42772Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig218 42070..42772 +
1691480928.5040135-UTR-H-paniculata_contig218:42069..427721691480928.5040135-UTR-H-paniculata_contig218:42069..42772Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig218 42070..42772 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.275728-CDS-H-paniculata_contig218:38613..386341622929595.275728-CDS-H-paniculata_contig218:38613..38634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 38614..38634 +
1691480928.4502323-CDS-H-paniculata_contig218:38613..386341691480928.4502323-CDS-H-paniculata_contig218:38613..38634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 38614..38634 +
1622929595.288433-CDS-H-paniculata_contig218:39455..395761622929595.288433-CDS-H-paniculata_contig218:39455..39576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 39456..39576 +
1691480928.4582288-CDS-H-paniculata_contig218:39455..395761691480928.4582288-CDS-H-paniculata_contig218:39455..39576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 39456..39576 +
1622929595.2981248-CDS-H-paniculata_contig218:40132..402111622929595.2981248-CDS-H-paniculata_contig218:40132..40211Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 40133..40211 +
1691480928.4659815-CDS-H-paniculata_contig218:40132..402111691480928.4659815-CDS-H-paniculata_contig218:40132..40211Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 40133..40211 +
1622929595.3103237-CDS-H-paniculata_contig218:40615..407601622929595.3103237-CDS-H-paniculata_contig218:40615..40760Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 40616..40760 +
1691480928.4738111-CDS-H-paniculata_contig218:40615..407601691480928.4738111-CDS-H-paniculata_contig218:40615..40760Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 40616..40760 +
1622929595.3270252-CDS-H-paniculata_contig218:41292..413851622929595.3270252-CDS-H-paniculata_contig218:41292..41385Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 41293..41385 +
1691480928.481164-CDS-H-paniculata_contig218:41292..413851691480928.481164-CDS-H-paniculata_contig218:41292..41385Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 41293..41385 +
1622929595.3366334-CDS-H-paniculata_contig218:41623..417281622929595.3366334-CDS-H-paniculata_contig218:41623..41728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 41624..41728 +
1691480928.4887056-CDS-H-paniculata_contig218:41623..417281691480928.4887056-CDS-H-paniculata_contig218:41623..41728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 41624..41728 +
1622929595.3496113-CDS-H-paniculata_contig218:42042..420691622929595.3496113-CDS-H-paniculata_contig218:42042..42069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 42043..42069 +
1691480928.4962323-CDS-H-paniculata_contig218:42042..420691691480928.4962323-CDS-H-paniculata_contig218:42042..42069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig218 42043..42069 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig218.5766.1prot_H-paniculata_contig218.5766.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig218 38614..42069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig218.5766.1

>prot_H-paniculata_contig218.5766.1 ID=prot_H-paniculata_contig218.5766.1|Name=mRNA_H-paniculata_contig218.5766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MSTETGETLSRGELLRHVSAACLGGGWMLTAAASGVVAKTPVMRLPDEDS
TTAATGYAGNADAVVPPFTTLPSGLQITDIKVGSGPEAQLGKGVVVQWVL
RRMNGYYVSASSEGDGEPFIYRVGDEKRAIKGFDEGIKGMQAGGTRRIVV
PPKLAYVEGCKDGNPGPIPVGLGPKQQINSRSTEPLTFEVKVTKVR*
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mRNA from alignment at H-paniculata_contig218:38443..42772+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig218.5766.1 ID=mRNA_H-paniculata_contig218.5766.1|Name=mRNA_H-paniculata_contig218.5766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4330bp|location=Sequence derived from alignment at H-paniculata_contig218:38443..42772+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGTGAAGACATGAGAATTCAACTGCTATGCTTGTCGCTGGTACCATGT
CCCGACTGGCCTTCGCCGCTGCCTTGTTCTCTGCACTTCGTCTTGTGAAT
TCATTCGTTCCTCTTTCTACCCAGTTCTCCCACGGAGCTGTGTGGCACAC
TTCTCCACAACATTGCTGGTCATGAGCACAGAGACCGGGGAGGTGGGTTG
GAAACATGAGTCTGAGTCTGAGTGCTGTCTGTGTCCAAAATACCTGCTGG
TCAAGTACTGTTCACCACAAGTGCTTTCTTCGACACGGAAACGTGACGCC
ATATGTGCAGTGAGTGTGTTGCCTACCAAGACCCTGAGTTCTCTTTGTAC
TCTTCGCTTGACACATGCTGGTGAATCACGTGCTCTGTTAAACGGCAACC
TCGCGCAACAATGTCGAACACACCAGCTGGTGCGTCAGTGACAAAACTAT
CTCGCACCTTTCACCCAGGGGTGTTTGCCAAGGATTAAGAGCTTCCCCAT
GTAAGATGATGTCGTATGTACATGTCGCCTGCTTGAAGATTGTTGATAAT
GCCAGCTGAGAGGAACATCTGAAGTCGAAGCTGTACGAGAGCGCCTCAAA
AATAACGACTGCTGATTAATTCTGAATCGACATTATCTTGTGTCCCATCT
TTCCCGTGTCCTCTTCAAAAATATTCTGATATCCATATCTTCTGGGTAGA
TATGTGTGTAACTGGTCTTTCCTCACTTGACTCTCCACCGCATGTGAATT
ACTCTGGCACAAAGCACAACCCAACTACAGCAGTAACTAGATTGGCCTAC
CATTTGAGTCTCGGTCTATCAGGAGACAAACAACGCTAATATCTGCTGTG
GTCCTGGGAGTGGCTGCAGTGTCCATCCCAAGTCACCATCTCATCAACCA
CAAATTGTTTACCAACCGGCCACCCCTCCGCTCCACTATTTTTCGATTCG
TTTTGACCTTGGCATACGTTGATCGCGTGTCGCAACACATCGACGACTAC
TATGCATTTGAAGACGTTGTCGCGAGGAGAACTGTTGCGTCATGTCTCAG
CGGCCTGTCTAGGCGGTGGCTGGATGTTGACCGCTGCGGCGAGCGGGGTC
GTGGCCAAGACACCCGTTATGAGGCTACCAGATGGTGAAATATGCAGATT
TCAACAAGCTGTCACTGCGTACCTCGAACCTAGTCAAAGTGCAAAATACG
TCGGCTGCCCAAGTCGGATAGTGTGGCAACCACCAACTCGACGTTGCCTT
CGCTTTTGCAAATGGTCTTTCTTTGAAGCCATCATTCACCATTCCATCCA
ATCGAAATTGTAGATAATCATCCGCCTGTGAAGAGTCGCGAACCATGGCG
GATTTACGCAGGTATTCAATCGCTCTTGAGCAAGTCTTGTAGTAGTTGTT
ACCAGTTCGGAATAGCAACTCGCTTAGTGAGTCCGCTGCACCAATTCTCT
GGGAGATGGAGTGTGTGAGAAGTCTTGCTAGCGGTACATGATGTGGCCAA
GCTCCTCTTGCAATACCTCAGCTTTTAGTGCTCGGTGGTCTCGACCTCGT
CAATCTTACCGACACTAATTGTTTTTGTCTACGAATAAAGTACCACACAT
CCGAAGAGGATAAAGGGCAAATAGGGTGTTTGACAGTTTCGGTATATAAT
AATGGTTGCTGCCTCTCCTTGGAACTCGTCCTACGAGCAGAGGATTCCAC
TACTGCAGCAACGGGATACGCCGGAAATGCCGACGCGGTGGTTCCTCCCT
TCACAACACTCCCTTCCGGGTGAGCGAGTTTTGCGGCAACTTGCTTCGAA
ACCACCCAAGTGTTGATTGTTGCTGCCATTGTAATCGCTGTTCCCTTCTC
CCCCTCCTCCCCAAGCCCGCCAGGCGACCAGTGTTACTCGAGAAGAACAT
CTCAGATAGATAGGTGCTGCGTCCGTCGACGAGTTCGAAGGACTGCGTTC
TGCTTGGGTGACCGCTTGTGTATATGTTAAAACTTGCAGGCACTGGAAGT
GTTGTGTGCGCACAACATTTTTTTGTGTATGTGTCACGAATCCAACGAGG
AAGATACGGTTCCGGTAGCACTGAAGAATTTGGTGCTCGTTGAATGAATA
CTACCGACCGCATAAACCGCAAATACTCGAATCAAAATTATCTTTCCTTC
CATTCCCCCCGCCTTGTCTGCAGGCTTCAAATAACCGACATCAAGGTCGG
AAGTGGTCCCGAAGCACAGCTCGGAAAGGGGGTGGTGGTACAATGGGTGT
TGCGCCGCATGAACGGATACTATGTGAGCGCCTCCTCGGAAGGGGACGGC
GAGCCATTTATTTACCGAGTGAGTACATTAGTGCGTATCTCTACCAGAGG
TCCTCCGTTATTTGTCGCGCTGTGTCTTCGCAGTTGTTGAATTTTGTATC
GCAGTGTGTAAGCGAGCTACCGTCGCCAACACAAGGTCAGGAAAAACAGC
AACGACAGTCACATAGCTTATCCGAAGCTCATCCATTTGAGGATACGGTG
CAAACAATATTGTTGTACAGAGTGCCATTTGATGCGTAATAGGGATGCAT
TTCCAAGCAATTTCCTCGCGTAACTTTGGCCAAAGTTTTATCAAAATACC
ATCTCCAGGTTCCGGTGTGTTGCAATCGATACGCCGTACCCTCCACTTGT
TGACGGTGCATGGTATCTAAAAACAAAATTCTGAATTGTGAGACACTACC
TATTCTCCTTTTTCACGCACAGTCGTTCGCGACCTATGTGCCTTTCCTTC
TGATGCCGTCTCTATTCCGTACCTGATTAGCAGTCATGCTCGATCGATGT
TATGTATGTTGCTTCTCCCCTCCTTCCCCCTCTGCGCCCCGATATTTCAG
GTTGGCGATGAAAAACGCGCTATAAAGGGCTTCGATGAGGGAATCAAGGG
AATGCAGGCTGGTGGCACGAGGCGCATAGTGGTGCCTCCCAAGGTGACTC
ACACTCGAGAGGTGTTTCAACGGCCTAGCTTGGAAAACAAATATTGTACT
CGTTCATGGTCTGTGGCTCTGACGTGGTATGTAGATGATACCCGAATAAG
TAAGAAGGCACGAAAACCGCGAGGACCAAAGCGAACAAGTCGCTACTTGA
ACACTATCGCTATTCTTCCTTGACTTTGCGTGCTTGCAATGCGTTCACTG
CACCTGCTTGCGGAAAAAAACACTTGTGCAGCTGGCGTATGTGGAGGGAT
GCAAGGATGGAAATCCAGGGCCGATCCCGGTAGGCCTAGGGCCGAAGCAG
CAGATCAACAGCCGCAGCACGGAGCCCTTGACATTCGTGAGTATCACACC
GCTTCCGTGGTGGCAATTTTTCGCATATTTATTGATTCATGTGGCACACG
AAATGTTGTTTCGTGTATGTTGGACTAAACGTACTACGCAAGGCTTCTAC
AGCCGATATTCGAAATCCGTTGATTTGGCAGACGAACTGAACCTAATTCA
AACCCACAGGATATATAACCGAGACAAACAGCAGGGCTGCTTTTGACGGT
TAGCGAACCTTGCCGAGATCTTCCATATCTGGGATGCTTGTACAATGGTG
TTGAAGTTGACGTATTGCCTGTCTCCTCCTCGTGGATTCTATGTGCGCAG
GAAGTGAAGGTGACCAAGGTCCGATAGCGAGGGCAGCGGCAACAGTGTGC
CTGGAGATGGAGGAGCGGCCACCCATGGCCGCATTGCCTGTGGCGCCTCC
GTTTTATTTTTTTCCTTTTTTTCCGGATCGCCAAACAAAAACGTGCGTAC
CGACAGGACTGAGAGTGGCGCTCAGCGCTGCATCTTGATGATGGCCAATA
CGCGTGATGTCGATGTTGCCTTGTTCGCAAGCAACGTTTATCCAACGCAC
GCAGCACAGATCAATCGTTGAGCTCGGCCCAGAAGTTTCGGAGTTGTAAG
TGTCGAAGTGGTGAGGGCTCAAGGACCTAGGCAGTCCCCGGGTGGCTACG
GTATTAGCTGTATTAACGATATAGATATGTGGCACAGACAGGATTAAACA
GCGAGAAAGCTTAGGATGATATCGCCCACTGTGTGATGACTGTCACTGTA
ACACTGCTAGTAGCAGTAGTAGATCATGGCTTTATACACTGGTACCTCGT
GGCACTGTTTGGATGTACAGTGTGTCTCCATGTCGTTTAGCTCATTATTT
TGCGGCCGCGTGAGCTTCATGACAAACGCACGCTTGAGATCCGTGTACGA
GTACAATTTTTGCCTCGCAAAGGACGCATGACGAGAACTCATTGCGCCCA
TCACGTATTGACCGACTTTAGATGCAACAGGAGTCAGATTTGACACGCGA
AGGACTAACGCGAGGAGGTTTAGGAATCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig218:38443..42772+

>mRNA_H-paniculata_contig218.5766.1 ID=mRNA_H-paniculata_contig218.5766.1|Name=mRNA_H-paniculata_contig218.5766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig218:38443..42772+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCACAGAGACCGGGGAGATGAGCACAGAGACCGGGGAGACGTTGTC
GCGAGGAGAACTGTTGCGTCATGTCTCAGCGGCCTGTCTAGGCGGTGGCT
GGATGTTGACCGCTGCGGCGAGCGGGGTCGTGGCCAAGACACCCGTTATG
AGGCTACCAGATGACGTTGTCGCGAGGAGAACTGTTGCGTCATGTCTCAG
CGGCCTGTCTAGGCGGTGGCTGGATGTTGACCGCTGCGGCGAGCGGGGTC
GTGGCCAAGACACCCGTTATGAGGCTACCAGATGAGGATTCCACTACTGC
AGCAACGGGATACGCCGGAAATGCCGACGCGGTGGTTCCTCCCTTCACAA
CACTCCCTTCCGGAGGATTCCACTACTGCAGCAACGGGATACGCCGGAAA
TGCCGACGCGGTGGTTCCTCCCTTCACAACACTCCCTTCCGGGCTTCAAA
TAACCGACATCAAGGTCGGAAGTGGTCCCGAAGCACAGCTCGGAAAGGGG
GTGGTGGTACAATGGGTGTTGCGCCGCATGAACGGATACTATGTGAGCGC
CTCCTCGGAAGGGGACGGCGAGCCATTTATTTACCGAGCTTCAAATAACC
GACATCAAGGTCGGAAGTGGTCCCGAAGCACAGCTCGGAAAGGGGGTGGT
GGTACAATGGGTGTTGCGCCGCATGAACGGATACTATGTGAGCGCCTCCT
CGGAAGGGGACGGCGAGCCATTTATTTACCGAGTTGGCGATGAAAAACGC
GCTATAAAGGGCTTCGATGAGGGAATCAAGGGAATGCAGGCTGGTGGCAC
GAGGCGCATAGTGGTGCCTCCCAAGGTTGGCGATGAAAAACGCGCTATAA
AGGGCTTCGATGAGGGAATCAAGGGAATGCAGGCTGGTGGCACGAGGCGC
ATAGTGGTGCCTCCCAAGCTGGCGTATGTGGAGGGATGCAAGGATGGAAA
TCCAGGGCCGATCCCGGTAGGCCTAGGGCCGAAGCAGCAGATCAACAGCC
GCAGCACGGAGCCCTTGACATTCCTGGCGTATGTGGAGGGATGCAAGGAT
GGAAATCCAGGGCCGATCCCGGTAGGCCTAGGGCCGAAGCAGCAGATCAA
CAGCCGCAGCACGGAGCCCTTGACATTCGAAGTGAAGGTGACCAAGGTCC
GATAGGAAGTGAAGGTGACCAAGGTCCGATAG
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