mRNA_H-paniculata_contig21755.5751.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: D7FR01_ECTSI (PC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR01_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 3.940e-19 Identity = 49/79 (62.03%), Postives = 55/79 (69.62%), Query Frame = 3
Query: 141 KKGGQAKGVKEKIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESMQG 377
KK GV KIELG KFVDVREFKG +DIREYYE GEM+PGKKGISL + WE LKENM+ I+ KVE + G
Sbjct: 52 KKQSDGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYE--KDGEMRPGKKGISLSTEHWEVLKENMDDINAKVEELSG 128
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A6F9DUN4_9ASCI (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DUN4_9ASCI) HSP 1 Score: 92.4 bits (228), Expect = 1.190e-18 Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 3
Query: 162 GVKEKIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
G EKI LGKMKFV VREFKG LIDIRE+YE N GEMKPGKKGISLQA+QW+ LK++++ I +K+ +
Sbjct: 55 GSDEKISLGKMKFVSVREFKGKILIDIREFYE--NNGEMKPGKKGISLQAEQWQKLKQSIDDIDEKIHQL 122
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A0N5D746_THECL (PC4 domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5D746_THECL) HSP 1 Score: 85.5 bits (210), Expect = 2.040e-16 Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3
Query: 171 EKIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
E ELGKM+FV VR FKG LIDIREYY+DKN+G++KPG+KGISL A+Q++ LK M I +K+ ++
Sbjct: 41 EMFELGKMRFVSVRSFKGKALIDIREYYQDKNSGDLKPGRKGISLSAEQYQRLKTIMSDIDEKLSTV 107
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A4W5N0C2_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=11 Tax=Salmonidae TaxID=8015 RepID=A0A4W5N0C2_9TELE) HSP 1 Score: 85.9 bits (211), Expect = 4.950e-16 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 120 KPSGGESKK-GGQAKGVKE------KIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
KP GGES K GG +KG + K ++GKM++V VREFKG LIDIREY+ D+ GEMKPG+KGISL +QW LK+ + I D V+++
Sbjct: 62 KPKGGESSKPGGTSKGSRNQDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQE-GEMKPGRKGISLNPEQWNQLKDQISEIDDAVKAI 151
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A7D9I8T4_PARCT (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I8T4_PARCT) HSP 1 Score: 84.3 bits (207), Expect = 6.290e-16 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 3
Query: 177 IELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESMQ 374
++GK + V+VREFKG LIDIREYYED + G MKPGKKGISLQ DQWEALKE++ I + +E ++
Sbjct: 50 FQIGKKRNVNVREFKGKVLIDIREYYED-DAGNMKPGKKGISLQVDQWEALKEHIAKIDEAIEELK 114
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A673WS35_SALTR (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Bilateria TaxID=33213 RepID=A0A673WS35_SALTR) HSP 1 Score: 85.9 bits (211), Expect = 1.050e-15 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 120 KPSGGESKK-GGQAKGVKE------KIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
KP GGES K GG +KG + K ++GKM++V VREFKG LIDIREY+ D+ GEMKPG+KGISL +QW LK+ + I D V+++
Sbjct: 92 KPKGGESSKPGGTSKGSRNQDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQE-GEMKPGRKGISLNPEQWNQLKDQISEIDDAVKAI 181
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A3P6S106_LITSI (PC4 domain-containing protein n=2 Tax=Onchocercidae TaxID=6296 RepID=A0A3P6S106_LITSI) HSP 1 Score: 83.2 bits (204), Expect = 1.940e-15 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 171 EKIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
E ELGKM+FV VR FKG LIDIREYY+DK +GE+KPG+KGISL +Q++ LK M I +K+ S+
Sbjct: 55 EMFELGKMRFVSVRSFKGKALIDIREYYQDKGSGELKPGRKGISLSGEQYQRLKAIMGDIDEKLSSV 121
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A3P7PSJ3_DRAME (PC4 domain-containing protein n=2 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A3P7PSJ3_DRAME) HSP 1 Score: 81.3 bits (199), Expect = 2.050e-15 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 3
Query: 177 IELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
ELGKM+FV VR FKG T IDIREYY DK +G+MKPGKKGISL DQ+E K +++I K+ ++
Sbjct: 3 FELGKMRFVCVRSFKGKTFIDIREYYNDKGSGQMKPGKKGISLSIDQYEQFKCILDSIDKKINTV 67
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: G7YWZ7_CLOSI (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YWZ7_CLOSI) HSP 1 Score: 81.3 bits (199), Expect = 2.110e-15 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 3
Query: 177 IELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVESM 371
I+L KFV VR+FKG T +DIRE+YEDK+TGEMKPGKKGISL +QW+ LK M I + +M
Sbjct: 2 IDLTGKKFVSVRQFKGRTFVDIREFYEDKSTGEMKPGKKGISLNVEQWDYLKSVMSEIDRDIVNM 66
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Match: A0A3P7EWE1_WUCBA (PC4 domain-containing protein n=5 Tax=Onchocercidae TaxID=6296 RepID=A0A3P7EWE1_WUCBA) HSP 1 Score: 82.4 bits (202), Expect = 2.250e-15 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 3
Query: 171 EKIELGKMKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMEAISDKVES 368
E ELGKM+FV VR FKG +LIDIREYY+DK +GE+KPG+KGISL +Q++ LK M I +K+ S
Sbjct: 38 EMFELGKMRFVTVRSFKGKSLIDIREYYQDKGSGELKPGRKGISLSEEQYQRLKAIMGDIDEKLSS 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21755.5751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21755.5751.1 >prot_H-paniculata_contig21755.5751.1 ID=prot_H-paniculata_contig21755.5751.1|Name=mRNA_H-paniculata_contig21755.5751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp MKFVDVREFKGMTLIDIREYYEDKNTGEMKPGKKGISLQADQWEALKENMback to top mRNA from alignment at H-paniculata_contig21755:14..3739- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21755.5751.1 ID=mRNA_H-paniculata_contig21755.5751.1|Name=mRNA_H-paniculata_contig21755.5751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3726bp|location=Sequence derived from alignment at H-paniculata_contig21755:14..3739- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21755:14..3739- >mRNA_H-paniculata_contig21755.5751.1 ID=mRNA_H-paniculata_contig21755.5751.1|Name=mRNA_H-paniculata_contig21755.5751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig21755:14..3739- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |