mRNA_H-paniculata_contig21746.5748.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: X2CR90_SACJA (Aureochrome2 (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=X2CR90_SACJA) HSP 1 Score: 240 bits (613), Expect = 1.080e-78 Identity = 126/150 (84.00%), Postives = 141/150 (94.00%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV AL+EEN+KLRGAIRANLGA+EA+ELL Q ++ +IA+NP +ATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 10 RERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGADEAKELLAQTESSSLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 159
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A126WZN1_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZN1_9PHAE) HSP 1 Score: 240 bits (612), Expect = 2.910e-77 Identity = 126/150 (84.00%), Postives = 140/150 (93.33%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV AL+EEN+KLRGAIR+NL AEEA+ELLEQ + +IA+NP +ATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 65 RERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLSAEEAKELLEQTETSNLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 214
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A126X1C8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum horneri TaxID=74089 RepID=A0A126X1C8_9PHAE) HSP 1 Score: 237 bits (605), Expect = 7.310e-77 Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV AL+EEN+KLRGAIRANLG EEA+ELL Q + +I+++P EATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 10 RERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 159
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A126X2D9_9PHAE (Putative LOV domain-containing protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A126X2D9_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.010e-76 Identity = 125/150 (83.33%), Postives = 140/150 (93.33%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV +L+EEN+KLRGAIRANLGAEEA+ELL Q ++ +IA+ P +ATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 45 RERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRANLGAEEAKELLAQTESSSLIASKPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 194
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A126X307_SARHM (Putative LOV domain-containing protein n=1 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A126X307_SARHM) HSP 1 Score: 236 bits (602), Expect = 8.860e-74 Identity = 124/150 (82.67%), Postives = 139/150 (92.67%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV AL+EEN+KLRGAIR+NLG EEA+ELL Q + +I+++P EATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 216 RERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 365
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: D8LT99_ECTSI (Aureochrome 3 n=5 Tax=Phaeophyceae TaxID=2870 RepID=D8LT99_ECTSI) HSP 1 Score: 227 bits (578), Expect = 2.380e-72 Identity = 121/151 (80.13%), Postives = 138/151 (91.39%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDNGY-IIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQRNI 453
RERNREHAKRSRVRKKFLLESLQKSV +L+EEN+KLRGAIR+NLG EEA+ELL + + +I++ P +ATKVLDDPDYSLVKALQ+AQQNFVITDPTL DNPIVFASQGFLELTGYTL+QVLGRNCRFLQGPDTDP+AVEKIRKA ++ +
Sbjct: 45 RERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRSNLGPEEAKELLAETETPTTLISSRPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGM 195
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A835YVH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH1_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.680e-64 Identity = 114/148 (77.03%), Postives = 131/148 (88.51%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKD---NGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKA 438
RERNREHAKRSRVRKKFLLESLQKSV+AL+EEN++LRGAIR N +A+ELL + + G ++A P EA +VLDDPDYSLV+ALQ+AQQNFVITDPTL DNPIVFASQGFL+LTGYTL+QVLGRNCRFLQGPDTDP+AVE+IRKA
Sbjct: 180 RERNREHAKRSRVRKKFLLESLQKSVSALQEENERLRGAIREN--CTDAQELLTRTEAGGGGGVLAATPGEANRVLDDPDYSLVRALQTAQQNFVITDPTLPDNPIVFASQGFLDLTGYTLDQVLGRNCRFLQGPDTDPKAVERIRKA 325
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A7S2WVR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVR6_9STRA) HSP 1 Score: 204 bits (520), Expect = 8.740e-64 Identity = 113/149 (75.84%), Postives = 129/149 (86.58%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQ--KDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKARQ 444
RERNREHAKRSRVRKKFLLESLQ+SV AL+ ENDKLR AI ++G+E A ELL + G +IA NP++AT++LDDPDYSLVKALQ+AQQNFVITDP+L DNPIVFAS GFL LTGY+L+QVLGRNCRFLQGP+TDPRAV KIRKA Q
Sbjct: 46 RERNREHAKRSRVRKKFLLESLQQSVGALQAENDKLRAAITEHMGSE-ADELLAACTEGTGSLIAANPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASSGFLTLTGYSLDQVLGRNCRFLQGPETDPRAVHKIRKAIQ 193
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: W7TTA1_9STRA (Aureochrome1-like protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTA1_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.980e-63 Identity = 109/147 (74.15%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANL--GAEEARELLEQKDNGYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKA 438
RERNREHAKRSRVRKKFLLESLQKSV AL+EENDKLRGAIR++L GA++ + E + + I+A++P ATK+LDDPDY+LVKALQ+AQQNFVITDPTL DNPIV+AS GFL LTGY ++Q+LGRNCRFLQGPDTDP AV+KIR+A
Sbjct: 10 RERNREHAKRSRVRKKFLLESLQKSVNALQEENDKLRGAIRSHLKEGADDLLKTCEVEVDESILASDPCSATKILDDPDYTLVKALQTAQQNFVITDPTLPDNPIVYASGGFLSLTGYQMDQILGRNCRFLQGPDTDPAAVDKIRRA 156
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Match: A0A7S2GCF2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCF2_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.230e-63 Identity = 109/147 (74.15%), Postives = 128/147 (87.07%), Query Frame = 1
Query: 4 RERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEARELLEQKDN--GYIIATNPDEATKVLDDPDYSLVKALQSAQQNFVITDPTLADNPIVFASQGFLELTGYTLEQVLGRNCRFLQGPDTDPRAVEKIRKA 438
RERNREHAKRSRVRKKFLLESLQ+SV AL++EN+KLR AI+ +L ++A LL Q G +IA++P++AT++LDDPDYSLVKALQ+AQQNFVITDP+L DNPIVFASQGFL LTGY L+QVLGRNCRFLQGP TDP+AVEKIR A
Sbjct: 25 RERNREHAKRSRVRKKFLLESLQQSVNALQQENEKLRSAIKEHLNPQQADSLLSQCSTKAGPLIASDPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPQTDPKAVEKIRNA 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21746.5748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21746.5748.1 >prot_H-paniculata_contig21746.5748.1 ID=prot_H-paniculata_contig21746.5748.1|Name=mRNA_H-paniculata_contig21746.5748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp KRERNREHAKRSRVRKKFLLESLQKSVAALKEENDKLRGAIRANLGAEEAback to top mRNA from alignment at H-paniculata_contig21746:2547..4078+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21746.5748.1 ID=mRNA_H-paniculata_contig21746.5748.1|Name=mRNA_H-paniculata_contig21746.5748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1532bp|location=Sequence derived from alignment at H-paniculata_contig21746:2547..4078+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21746:2547..4078+ >mRNA_H-paniculata_contig21746.5748.1 ID=mRNA_H-paniculata_contig21746.5748.1|Name=mRNA_H-paniculata_contig21746.5748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig21746:2547..4078+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |