mRNA_H-paniculata_contig21685.5731.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 2.080e-41 Identity = 68/114 (59.65%), Postives = 89/114 (78.07%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYLVTTK 342
E+ VRVCS CY + E FR+A LSGS E AM A+ GC+NLRVPY++YH ELPVHCAA+GGN+ +L+WL++DRCCP++ D +K I L D++ SVM AAAASG ++MRYL T+
Sbjct: 430 EKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQ 543
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 137 bits (344), Expect = 3.790e-35 Identity = 68/114 (59.65%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYLVTTK 342
ER VRVC CY + FR ALL GS + AM A+ GC+NLR P+S ELPVHCAAAGGNV L+ WLLEDRCCP++ D +K +P D RSVM AAA SGR E+MRYL T+
Sbjct: 570 ERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQ 681
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 137 bits (344), Expect = 3.830e-35 Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYL 330
ER VRVC CY + FR ALL GS + AM AY GC+NLR P+S ELPVHCAAAGGNV L+ WL+EDRCCP++ D +K +P D RSVM AAA SGR E+MRYL
Sbjct: 640 ERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYL 747
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.180e-34 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 10 VRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYLV 333
+RVC C + E FR ALL G +E AM AY GC+NL PY+V+HGELPVHCAAAGGNV LLSWL+E+ CP++ D K +P++D + +V+ AAA +G+ + MRYLV
Sbjct: 560 MRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCPIFTDSDKKVPIKDLRSLTVLGAAAVNGQVQAMRYLV 667
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.490e-34 Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYLV 333
ER R+C C E+NE FR ALL+G A AY GC+NLR PYS+Y LPVHCAA GG++ LL+WLLE++ CP++ D + I L + + SVM AA +G T +MRYL+
Sbjct: 85 ERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGRKESVMAVAAQNGHTHIMRYLL 195
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.860e-33 Identity = 51/82 (62.20%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKK 246
E+ VRVCS CY + E FR+A LSGS E AM A+ GC+NLRVPY++YH ELPVHCAA+GGN+ +L+WL++DRCCP++ D +K
Sbjct: 106 EKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREK 187
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI) HSP 1 Score: 119 bits (298), Expect = 5.750e-29 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 10 VRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPLRDNQHRSVMEAAAAS 303
+RVC C + E FR ALL G +E AM AY GC+NL PY+V+HGELPVHCAAAGGNV LLSWL+E+ C ++ D K +P+RD + +V+ AAA +
Sbjct: 558 MRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAAVN 655
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK) HSP 1 Score: 91.7 bits (226), Expect = 1.560e-19 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGELPVHCAAAGGNVRLLSWLLEDRCCPVYADPKKMIPL-RDNQHRSVMEAAAASGRTEVMRYL 330
E+ RVC C + E FR AL G + AY G +NLR PY+V+ GE PVHCAAAGG++ LL+WL+++R V K PL + S M AA +G E+MR+L
Sbjct: 129 EKKARVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYTVHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQRPLFASDGITSCMSLAAVNGNLEMMRWL 239
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A7S1Z8W0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z8W0_TRICV) HSP 1 Score: 84.3 bits (207), Expect = 4.200e-18 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGEL--PVHCAAAGGNVRLLSWLLEDRCCPVYADPKK----------MIPLRDNQHRSVMEAAAASGRTEVMRYLVTTK 342
E V+VC PC FREAL+ G ++A + G +NLR P+ GE+ PVHCAA GGN+ L WL++ P+ K ++PL ++ RS ++ A + +V+RYLV K
Sbjct: 5 EGTVKVCGPCDWLATAFREALMGGGHDRAFALHATGNVNLRSPFCNVKGEVLYPVHCAAIGGNISTLRWLVDQHHTPISIQSGKKNNNNNANAPLVPLLTSKGRSALDIAVSGRNVDVLRYLVVEK 130
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Match: A0A7S4S024_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S024_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.150e-18 Identity = 47/134 (35.07%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 1 ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGEL--PVHCAAAGGNVRLLSWLLEDRCCPVY------------------ADPKKMIPLRDNQHRSVMEAAAASGRTEVMRYLVTTK 342
E+ V VC C R AL+ G ++ + YE G +NLRVPY GE PVHCAA GGN+ +L WL++ RCCP+Y +D P+ ++ RSV++ A + +++RYL+ K
Sbjct: 551 EKTVNVCKHCDFLAGSMRIALMGGDFDRVLALYETGNVNLRVPYMNVKGETLYPVHCAAMGGNLEVLKWLVDLRCCPIYTYEYRQNNLYNKKYNKKSSDNTGPTPILTSRGRSVLDIALKGPKVDLLRYLIAEK 684 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21685.5731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21685.5731.1 >prot_H-paniculata_contig21685.5731.1 ID=prot_H-paniculata_contig21685.5731.1|Name=mRNA_H-paniculata_contig21685.5731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp ERVVRVCSPCYESNERFREALLSGSSEQAMGAYEMGCINLRVPYSVYHGEback to top mRNA from alignment at H-paniculata_contig21685:2338..3487- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21685.5731.1 ID=mRNA_H-paniculata_contig21685.5731.1|Name=mRNA_H-paniculata_contig21685.5731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1150bp|location=Sequence derived from alignment at H-paniculata_contig21685:2338..3487- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21685:2338..3487- >mRNA_H-paniculata_contig21685.5731.1 ID=mRNA_H-paniculata_contig21685.5731.1|Name=mRNA_H-paniculata_contig21685.5731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig21685:2338..3487- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |