mRNA_H-paniculata_contig21684.5730.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: D8LEZ1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ1_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.920e-92 Identity = 153/225 (68.00%), Postives = 169/225 (75.11%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALVAAAETKGIPATTKGGS--GGSNDAEVETKSSPKREKSPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEGMGERVEVSGFTS 672
+RVSLFDASFPGTLPVLN+SAVDQ +K ALALG VH+RSVFERKHYFYSDLPHGYQITQ PIA+GGSLPL+++PA + G GGSND P+IGITRIQLEVDSGKSLHDR G +SLVDLNRAGTALMEIV EPEIR A E GAA++SLQL LRR+G CDGNMEDGSMRCDLNVS+RP G EG+GERVEV S
Sbjct: 51 SRVSLFDASFPGTLPVLNASAVDQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGSLPLIFDPAGPTKPKAGGAAKARSADELQGGSNDPGFHV---------PAIGITRIQLEVDSGKSLHDRKGEGAERSLVDLNRAGTALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPAGTEGLGERVEVKNMNS 266
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A5D6XUM0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUM0_9STRA) HSP 1 Score: 204 bits (520), Expect = 3.660e-57 Identity = 119/248 (47.98%), Postives = 146/248 (58.87%), Query Frame = 1
Query: 7 RVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALVAAAETKGIPATTKGGSGGSNDAEVE-TKSSPKREKSP-------------------------SIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEGMGERVEVSGFTS 672
VS FDA+ PGTLP +N V Q ++ LA+G +VH RSVFERKHYFY DLP GYQ+TQ PIASGG L +PA +GG G S DA + +K ++EK+ S+ I RIQ+E DSGKS+HD G ++VDLNRAGTAL+EIV+EP++R E G V+ LQ LLR LG CDGNME+GSMRCDLNVS+R + GERVEV S
Sbjct: 503 NVSFFDAALPGTLPTVNRECVHQAVRAGLAVGARVHPRSVFERKHYFYCDLPLGYQLTQQRAPIASGGVLHF-------------DVPA--EGGDGESADAAFDASKFKSRKEKNEALRERKVRQQSRAERMGSGDDIVARSVRIARIQIEQDSGKSIHDLEPG---STVVDLNRAGTALLEIVMEPDLRSPAEAGQVVRQLQHLLRHLGVCDGNMEEGSMRCDLNVSVRRASDPTFGERVEVKNMNS 732
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A6G0X9N4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9N4_9STRA) HSP 1 Score: 195 bits (495), Expect = 6.000e-56 Identity = 114/228 (50.00%), Postives = 140/228 (61.40%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALVAAAETKGIPATTKGGSGGSNDAEVETKSSPKREK--SPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEG---MGERVEVSGFTS 672
+RVS FDA+ PGTLP +N + V Q I+TA AL VH +SVFERKHYFY DLP GYQITQ PIAS G L + A A + + + N A ++S E+ + I RIQ+E DSGKSLH + VDLNRAGT LMEIV EP++R A E G ++ +Q LLR +GTCDGNMEDGSMRCDLNVS+RP ++ G+RVEV S
Sbjct: 42 SRVSFFDAALPGTLPTVNRACVAQAIRTAHALQSDVHLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKQAQANALKNTNFTSRKE-----KNAALQAAQASSAAEEWIEKQVRINRIQIEQDSGKSLHTLDA-----THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGKRVEVKNMNS 259
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A3R6Z786_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z786_9STRA) HSP 1 Score: 192 bits (489), Expect = 6.230e-56 Identity = 116/227 (51.10%), Postives = 140/227 (61.67%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALVAAAETKGIPATTKGGSGGSNDAEVETKSSPKREK--SPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTG--EEGMGERVEVSGFTS 672
+RVS FDA+ PGTLP LN S V Q ++TA AL V+ +SVFERKHYFY DLP GYQITQ PIAS G L + A ET + T S +A + ++ ++ + I RIQ+E DSGKSLH + VDLNRAGT LMEIV EP++R A E G ++ +Q LLR +GTCDGNMEDGSMRCDLNVS+RP E GERVEV S
Sbjct: 41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKD---TAGET--VARNTNFSSRKEKNAAQKQLAAADADEWVEKQVRINRIQIEQDSGKSLHTLDA-----THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNS 257
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A024UAY1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAY1_9STRA) HSP 1 Score: 194 bits (494), Expect = 8.250e-56 Identity = 116/227 (51.10%), Postives = 140/227 (61.67%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPAL--VAAAETKGIPATTKGGSGGSNDAEVETKSSPKREKSPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTG--EEGMGERVEVSGFTS 672
+RVS FDA+ PGTLP +N + V Q ++TA AL V+ +SVFERKHYFY DLP GYQITQ PIAS G L + + VAA T K + A E + +R+ + I RIQ+E DSGKSLH + VDLNRAGT LMEIV EP++R A E G ++ +Q LLR +GTCDGNMEDGSMRCDLNVS+RP E GERVEV S
Sbjct: 41 SRVSFFDAAMPGTLPSVNKACVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKHSSNDVAARNTNFSSRKEKNAAQKQLAAATEVEEGIERQ----VRINRIQIEQDSGKSLHTLDA-----THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKSDVEAPFGERVEVKNMNS 258
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: K3X059_GLOUD (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X059_GLOUD) HSP 1 Score: 193 bits (491), Expect = 2.280e-55 Identity = 107/225 (47.56%), Postives = 137/225 (60.89%), Query Frame = 1
Query: 7 RVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALVAAAETKGIPATTKGGSGGSNDAEV---ETKSSPKREKSPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEGMGERVEVSGFTS 672
+VS FDA+ PGTLPV+N V Q I+T+LA+ +VH RS+FERKHYFY DLP GYQ+TQ PIA+ G L IPA + G G ++ +K ++EK+ ++ + E KS+HD ++VDLNRAGTALMEIV+EP++R E G +K LQ LLR L CDGNME+GSMRCDLNVS+R +E GERVEV S
Sbjct: 34 QVSFFDAALPGTLPVVNKECVHQAIRTSLAVNAQVHPRSIFERKHYFYCDLPLGYQLTQQRAPIATNGVLHF-------------DIPAASIVGESGDEESSAVFDASKYKSRKEKNEALRKWKAAQEAKKRKSIHDLE---EDSTVVDLNRAGTALMEIVMEPDLRSPVEAGQVMKQLQHLLRHLEVCDGNMEEGSMRCDLNVSVRRQDDEAFGERVEVKNMNS 242
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A3F2RH49_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH49_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.500e-55 Identity = 118/253 (46.64%), Postives = 151/253 (59.68%), Query Frame = 1
Query: 7 RVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSL-------PLLYEPALVAAAETKGIPATTKGGSGGSNDA--EVETKSSPKREKSP----SIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPT--GEEG----------------MGERVEVSGFTS 672
VS FDA+ PGTLPV+N V+Q I+T LA+ V+ RS+FERKHYFY DLP GYQ+TQ P+ASGG+L ++ E A E A+ N+A + + K + K+E+ S+ ITRIQ+E DSGKS+HD ++VDLNRAGTAL+EIV+EP++R E G ++ LQ LLR L CDGNME+GSMRCDLNVS+RPT GE+ GERVEV S
Sbjct: 58 HVSFFDAALPGTLPVINREIVNQAIRTGLAVDATVNPRSMFERKHYFYCDLPLGYQLTQQRAPVASGGALHFELPSSAIISEHAAARGGEETIFDASKYKSRKEKNEALRKWKAKQTAKQEEEDVIARSVRITRIQIEQDSGKSIHDLEDD---STVVDLNRAGTALLEIVMEPDLRSPLEAGQVMRQLQQLLRHLEVCDGNMEEGSMRCDLNVSVRPTNLGEDTDAEALHHALTSANAPPFGERVEVKNMNS 307
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: H3GQR9_PHYRM (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQR9_PHYRM) HSP 1 Score: 192 bits (489), Expect = 5.660e-55 Identity = 113/229 (49.34%), Postives = 141/229 (61.57%), Query Frame = 1
Query: 7 RVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPL-LYEPALVAAAETKGIPATTKGGSGGSNDAEVETKSSPKREKSP-----------SIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEGMGERVEV 657
VSLFDA+ PGTLPVLN V Q I+T LA+ VH RS+FERKHYFY D+P GYQ+TQ P+ASGG+L L A+V+ GI + E + ++ K+ S+ ITRIQ+E DSGKS HD ++VDLNRAGTAL+EIV+EP++R E G ++ LQ LLR L CDGNME+GSMRCDLNVS+RPT G G VE+
Sbjct: 60 HVSLFDAALPGTLPVLNRECVRQAIRTGLAVDATVHPRSLFERKHYFYCDMPLGYQLTQQRAPVASGGALHFELPASAIVSEHGEGGIEEQETTFDASKYKSRKEKNEALRKRKAKQATKQEDVIPRSVRITRIQIEQDSGKSNHDLE---EHNTVVDLNRAGTALLEIVMEPDLRSPLEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPT-NLGRGADVEM 284
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: W4FIX4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIX4_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.170e-55 Identity = 115/227 (50.66%), Postives = 139/227 (61.23%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPL-LYEPALVAAAETKGIPATTKGGSGGSNDAEVETKSSPKRE-KSPSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTG--EEGMGERVEVSGFTS 672
+RVS FDA+ PGTLP LN S V Q ++TA AL V+ +SVFERKHYFY DLP GYQITQ PIAS G L + + A A + + N A+ + ++ E + I RIQ+E DSGKSLH + VDLNRAGT LMEIV EP++R A E G ++ +Q LLR +GTCDGNMEDGSMRCDLNVS+RP E GERVEV S
Sbjct: 41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAGDTVARNTNFSSRKE-----KNAAQKQLAAADANEWVEKQVRINRIQIEQDSGKSLHTLDA-----THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNS 257
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Match: A0A485LE09_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE09_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.250e-54 Identity = 114/230 (49.57%), Postives = 141/230 (61.30%), Query Frame = 1
Query: 4 ARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYSDLPHGYQITQNHRPIASGGSLPLLYEPALV-AAAETKGIPATTKGGSGGSNDAEVETKSSPKREKS---PSIGITRIQLEVDSGKSLHDRSGGLRPQSLVDLNRAGTALMEIVLEPEIRGAEEVGAAVKSLQLLLRRLGTCDGNMEDGSMRCDLNVSIRPTGEEG---MGERVEVSGFTS 672
+RVS FDA+ PGTLP +N + V Q ++TA AL V +SVFERKHYFY DLP GYQITQ PIAS G L + V A A+ + T+ +A ++ SS + + I RIQ+E DSGKSLH + VDLNRAGT LMEIV EP++R A E G ++ +Q LLR +GTCDGNMEDGSMRCDLNVS+RP ++ GERVEV S
Sbjct: 70 SRVSFFDAALPGTLPAVNRACVAQAVRTAHALQSDVQLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKKVDVNAGADVRNTNFATRK----EKNAALKAASSAAATEEWIEKQVRINRIQIEQDSGKSLHTLDA-----THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGERVEVKNMNS 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21684.5730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21684.5730.1 >prot_H-paniculata_contig21684.5730.1 ID=prot_H-paniculata_contig21684.5730.1|Name=mRNA_H-paniculata_contig21684.5730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp SARVSLFDASFPGTLPVLNSSAVDQVIKTALALGCKVHQRSVFERKHYFYback to top mRNA from alignment at H-paniculata_contig21684:167..1462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21684.5730.1 ID=mRNA_H-paniculata_contig21684.5730.1|Name=mRNA_H-paniculata_contig21684.5730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig21684:167..1462- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21684:167..1462- >mRNA_H-paniculata_contig21684.5730.1 ID=mRNA_H-paniculata_contig21684.5730.1|Name=mRNA_H-paniculata_contig21684.5730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig21684:167..1462- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |