mRNA_H-paniculata_contig2155.5684.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A6H5J9Q8_9PHAE (FAD_binding_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9Q8_9PHAE) HSP 1 Score: 364 bits (934), Expect = 1.060e-120 Identity = 193/257 (75.10%), Postives = 222/257 (86.38%), Query Frame = 1
Query: 1 QQKLPVIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
+Q+LPV++VGGGLAGLAASIEASRAGA V L+EKG++IGGNSAKATSGINGALT AQ SD+ ++F D+IKSGGGRS+PELVD++V +S+EAV WL SFGL+LSLLSQCGGHQAPRTHRIP G DGRPVPVGWTTV VYK+V+D EE S V+TNAHVT+L T++ +G VTGVRY+QG D E+ + AASVVLTTGGYAYDRSEGSLLSEFA E LHLATTSGPQATGDGVRLGQAAGA+LVDMDQ+QV
Sbjct: 29 EQQLPVVVVGGGLAGLAASIEASRAGAPVVLMEKGSRIGGNSAKATSGINGALTTAQTLKDHSDTLQSFKADIIKSGGGRSTPELVDVLVEKSAEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGSDGRPVPVGWTTVQKVYKFVEDHPEEIS-VMTNAHVTSLTTND-AGRVTGVRYQQGGDGD---EIGLPAASVVLTTGGYAYDRSEGSLLSEFAPERLHLATTSGPQATGDGVRLGQAAGASLVDMDQVQV 280
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A835YME9_9STRA (NADH-dependent fumarate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME9_9STRA) HSP 1 Score: 268 bits (686), Expect = 3.120e-83 Identity = 154/258 (59.69%), Postives = 184/258 (71.32%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRS--FGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYR---QGQGDDAN-EEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
V +VGGGLAGLAA+IEA AGA V+L +K +GGNSAKATSGINGA T Q G D E F DVI+SG GRS P LVD++ RS++AV WL FGL L+ ++ CGGH APRTHR+P PDGRPVPVG+TT+ V Y+ R E + +VTNA VT L+ ++ G VTG+ YR QG G E VE+ A +VVL TGGYA+DRS SLLS++A + LHLATTSGPQATGDGVRL + GAALVDMDQIQV
Sbjct: 55 VAVVGGGLAGLAAAIEAYEAGATVYLFDKAKSLGGNSAKATSGINGAETSVQRDKGIQDKVEMFHGDVIRSGAGRSVPALVDVVAGRSADAVEWLMGDRFGLGLTAIAHCGGHSAPRTHRLPPLPDGRPVPVGFTTIKAVQGYLSSRPERVN-IVTNAEVTRLLVAKD-GAVTGLSYRRAAQGGGKGGQGETVEVAAGAVVLATGGYAFDRSPASLLSKYAPDKLHLATTSGPQATGDGVRLAEDLGAALVDMDQIQV 310
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A0G4G8H0_9ALVE (FAD_binding_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G8H0_9ALVE) HSP 1 Score: 236 bits (601), Expect = 1.750e-70 Identity = 136/253 (53.75%), Postives = 175/253 (69.17%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSF-GLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
VI+VG GLAGL A+IEA +AGA V LLEK A GGNSAKATSG+N T AQ+ DS F EDVI SGGG S P+LVD++V+ S+ A ++L +F GLNLS++SQCGGH PRTHR+P PDG+P PVGWTTV+T+ K+V A + TN+ VT L+ D +G+V GV G+ E+ A +VVL TGGY++DRS S LS++A +++L TT+G A GDGVRLG GA +VDMD++QV
Sbjct: 49 VIVVGSGLAGLTATIEAEKAGANVILLEKTANTGGNSAKATSGMNATPTRAQLMQHIEDSLHEFEEDVIASGGGFSDPQLVDVLVKSSAYAYNFLETFEGLNLSVVSQCGGHSKPRTHRLPPSPDGKPSPVGWTTVSTLKKFVTSLP--AVTLRTNSRVTHLLKDS-AGKVGGVGLESGE--------EVRAGAVVLATGGYSHDRSADSFLSKYAPSVVNLPTTNGNFAEGDGVRLGLGVGAGVVDMDKVQV 290
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A8J1UY63_OWEFU (Ofus.G22230 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UY63_OWEFU) HSP 1 Score: 224 bits (572), Expect = 1.240e-66 Identity = 124/252 (49.21%), Postives = 174/252 (69.05%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
VI+VGGGLAGL+ASIEASR GA+V ++EK +GGNSAKATSGING T AQ +DS +AF D + SG G S ELV ++ ++S +A+++L+SFG+NL+ + Q GGH A RTHRIP P+G+P PVGWT V+T+ K V++ + V+T + + ++ E G V GV Y G E+ E+ A +V+LT GGYA D +E SLL+E+ ++ L TT+GP ATGD V++G+ AG +L+ MD++QV
Sbjct: 59 VIVVGGGLAGLSASIEASRLGAKVTIIEKEKNLGGNSAKATSGINGVGTDAQSANKVTDSIDAFVSDTLSSGDGLSKEELVQVLGKQSGDAITFLKSFGVNLTSVVQLGGHSAARTHRIPPTPEGKPSPVGWTIVSTLRKVVENELADKVNVLTKSTLKTVLI--EDGTVKGVAYTTEDG----EQKELAADAVILTAGGYANDHTETSLLAEYTPQLAKLPTTNGPWATGDVVKIGRDAGMSLIHMDKVQV 304
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A4P9YIF9_ROZAC (FAD/NAD(P)-binding domain-containing protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YIF9_ROZAC) HSP 1 Score: 207 bits (527), Expect = 1.930e-62 Identity = 121/253 (47.83%), Postives = 163/253 (64.43%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRS-EGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
V+++G GLAGL ++IEA+R GA+V L+EK A IGGNSAKATSGING+ T Q+ G DS E F D +KSGG LV ++ +S A+ WL SFGLNLS+LSQCGGH RTHR P +GRP PVGW ++ + K+V++ ++ V N +T ++ E+ + + QG E A S VLTTGG++ D+S SLL EFA +L LATT+G ATGDGV++ + G +LVDMD++QV
Sbjct: 9 VVVIGSGLAGLTSTIEAARNGAKVTLIEKEASIGGNSAKATSGINGSETKYQMDAGIKDSIEEFENDTLKSGGDFCDKSLVKVLASQSKSAIEWLSSFGLNLSVLSQCGGHSVKRTHREP-DVNGRPAPVGWDIISALRKHVENDLKDQVTVKVNTKLTDMVV--ENDRLAKIVTVDSQGTAE----EFEADSFVLTTGGFSADKSYNDSLLKEFAPNLLSLATTNGKWATGDGVKIARKIGVSLVDMDKVQV 254
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A1Y3MT96_PIRSE (Fumarate reductase (Fragment) n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y3MT96_PIRSE) HSP 1 Score: 210 bits (535), Expect = 2.890e-61 Identity = 119/268 (44.40%), Postives = 170/268 (63.43%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVF--------------LLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAA-SVVLTTGGYAYDRSEGSLLSEFASEML-HLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
+I++G GLAGL A+IEA + +++ L+EK IGGNSAKATSGINGALT Q G DS E FS+D +KSGG + P LV+ +V S +AV WL F L LS +SQCGGH+ PRTHR DG+P PVGW ++ + Y+Q+ ++ ++ N V ++T E+ +V GV+Y + + + LAA +V+L +GGYA+D ++ SLL F + L ++ TT+GP ATGDGV++G A GAALV+MD++Q+
Sbjct: 1 IIVIGSGLAGLTATIEAYQTAKKIYSGEIEKNHSFPKIYLIEKEKNIGGNSAKATSGINGALTKYQKELGIEDSLEQFSKDTLKSGGNLNVPSLVNTLVHDSKDAVEWLAQFDLILSAISQCGGHEIPRTHRQAPRADGKPSPVGWNIISGLRNYIQNDLKDHVEIMLNTRVQKILTSEDGSKVIGVQYETTNLETKETKQDTLAAKAVILASGGYAHDWTDTSLLRRFGEKSLENVPTTNGPFATGDGVKMGTAIGAALVNMDKVQI 268
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A836CD50_9STRA (FAD binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD50_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.520e-61 Identity = 118/223 (52.91%), Postives = 149/223 (66.82%), Query Frame = 1
Query: 133 ATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRS--FGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANE--------EVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
ATSGINGA T Q G D+ E F +D +KSGGGRS P LV + S++A++WL FGL L+ +++CGGH APRTHR+P PDGRPVPVG+ T+ V ++ R E +VTNA VT L+ D + G V G+RY Q +A E E+ AA+VVL TGG+AYDRSEGSLL ++ + HLATTSGP ATGDG++L +A GA LVDMDQIQV
Sbjct: 12 ATSGINGAETAVQRDKGIHDTVELFRDDTLKSGGGRSVPALVTELTGSSAQAIAWLMGERFGLGLTAIARCGGHSAPRTHRLPPLPDGRPVPVGFATIRAVQGHLASRPERVQ-IVTNARVTQLLLDSQ-GAVRGLRYIQQTSTEATGGAPQGGEGETEVAAAAVVLATGGFAYDRSEGSLLRKYTPDKAHLATTSGPYATGDGIKLAEAVGAVLVDMDQIQV 232
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: G0TV76_TRYVY (Putative NADH-dependent fumarate reductase n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0TV76_TRYVY) HSP 1 Score: 212 bits (540), Expect = 2.320e-60 Identity = 121/260 (46.54%), Postives = 168/260 (64.62%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSG-GGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESG-------EVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
V++VGGGLAGL+A+IEA+ GAQV LLEK ++GGNSAKATSGING T AQ G D + F D KSG GG + P LV + +S++A+SWL S G+ L++LSQ GGH RTHR P DG P+P+G T + + +++ + ++TN+ VT L+ + VTGV+ R G GD E ++LA +V+L TGG++ D++ SLL E+A ++ TT+GP ATGDGV+L + GA LVDMD+IQ+
Sbjct: 55 VVVVGGGLAGLSAAIEAAGCGAQVILLEKEGRLGGNSAKATSGINGWGTRAQAKAGIMDGGKYFERDTYKSGVGGNTDPALVKTLSMKSADAISWLTSLGVPLTVLSQLGGHSRKRTHRAPDTTDGTPMPIGHTIMKVLENHIRSNLSDRVTIMTNSSVTELLNERREHPDGSVQVRVTGVKIRHGDGD----ETQILADAVILATGGFSNDKTSDSLLREYAPDLPGFPTTNGPWATGDGVKLARRLGAKLVDMDKIQL 310
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: R7TZF1_CAPTE (FAD_binding_2 domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TZF1_CAPTE) HSP 1 Score: 207 bits (526), Expect = 2.450e-60 Identity = 117/252 (46.43%), Postives = 165/252 (65.48%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEESGEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRSEGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
V++VGGGLAG++A+IEA+R GA V +++K IGGNSAKATSG+NGA T AQ G SDS +F ED + SG G + ELV+I+ S++A ++R FG+NL + Q GGH RTHRIP DG+PVPVGWT V+++ K++++ +E VVTNA +I E G GV+Y DA + +L +VVLT GGYA D ++ SLL ++ ++ TT+GP ATGD ++ + +LV MD++QV
Sbjct: 11 VVVVGGGLAGMSAAIEAARHGAHVTIIDKEKNIGGNSAKATSGMNGANTRAQKEAGISDSIASFKEDTLNSGDGLCNVELVNILATNSADAHEFIRGFGVNLVDVVQLGGHSNKRTHRIPPTEDGKPVPVGWTIVSSLKKHIENEMKEKIAVVTNAAFQRVII--EDGRPVGVKYT-----DAENQAHVLRGAVVLTAGGYANDHTDKSLLEKYVPDLAVYPTTNGPWATGDIIKRTEDINLSLVHMDKVQV 255
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Match: A0A075AS77_ROZAC (Fumarate reductase n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AS77_ROZAC) HSP 1 Score: 206 bits (525), Expect = 7.450e-60 Identity = 120/254 (47.24%), Postives = 163/254 (64.17%), Query Frame = 1
Query: 16 VIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINGALTPAQVFTGASDSFEAFSEDVIKSGGGRSSPELVDIIVRRSSEAVSWLRSFGLNLSLLSQCGGHQAPRTHRIPAGPDGRPVPVGWTTVNTVYKYVQDRKEEASGVVTNAHVTALITDEES-GEVTGVRYRQGQGDDANEEVEMLAASVVLTTGGYAYDRS-EGSLLSEFASEMLHLATTSGPQATGDGVRLGQAAGAALVDMDQIQV 771
V+++G GLAGL ++IEA+R GA+V L+EK IGGNSAKATSGING+ T Q+ G DS E F D +KSGG LV ++ +S A+ WL SFGLNLS+LSQCGGH RTHR P +GRP PVGW ++ + K+V++ ++ V N +T ++ D + ++ V D + E A S VLTTGG++ D+S SLL EFA +L LATT+G ATGDGV++ + G +LVDMD++QV
Sbjct: 38 VVVIGSGLAGLTSTIEAARNGAKVTLIEKEGTIGGNSAKATSGINGSETKYQMDAGIKDSIEEFENDTLKSGGDFCDKSLVKVLASQSKSAIEWLSSFGLNLSVLSQCGGHSVKRTHREP-DVNGRPAPVGWDIISALRKHVENDLKDQVTVKVNTKLTDMVVDNDRLAKIVTV-------DSQSTAEEFEADSFVLTTGGFSADKSYNDSLLKEFAPNLLSLATTNGKWATGDGVKIARKIGVSLVDMDKVQV 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2155.5684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2155.5684.1 >prot_H-paniculata_contig2155.5684.1 ID=prot_H-paniculata_contig2155.5684.1|Name=mRNA_H-paniculata_contig2155.5684.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=262bp QQKLPVIIVGGGLAGLAASIEASRAGAQVFLLEKGAKIGGNSAKATSGINback to top mRNA from alignment at H-paniculata_contig2155:259..11033- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2155.5684.1 ID=mRNA_H-paniculata_contig2155.5684.1|Name=mRNA_H-paniculata_contig2155.5684.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10775bp|location=Sequence derived from alignment at H-paniculata_contig2155:259..11033- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2155:259..11033- >mRNA_H-paniculata_contig2155.5684.1 ID=mRNA_H-paniculata_contig2155.5684.1|Name=mRNA_H-paniculata_contig2155.5684.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at H-paniculata_contig2155:259..11033- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |