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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 1786 |
| Cds size | 1038 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2154.5682.1 >prot_H-paniculata_contig2154.5682.1 ID=prot_H-paniculata_contig2154.5682.1|Name=mRNA_H-paniculata_contig2154.5682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp
METKLDRYGEYKVGGLTDHQAYEFWHKFKTSELDNLESQIQILKEKGRSF
TAPNSPWKKLGVKSTSNVQRLLRQLATTQRDRRRTPHVSGRWENQPKRKW
PPRSSGKKTAAQIQREHSTALQATSPMDSCAHHIEPAGNTEIIQVLLNTF
DQDLTEITVLEMGYGTGYLVRRMLEAGVKKILAIEALRSAWYLKSMFDYD
DRLSLYGVDVMELKLVRPECFSTVDAITCIIGVEEPTLEALRLFFDTDNI
RNIVLLSPCSGFRQLVDTVIERWFEHDSAFDWNNIHVTAGRIPSVKLSGS
GNLRHLWWLRKSKTMRARRSCSTRAAKNRMAQDVRDALASKKCEQ* back to topmRNA from alignment at H-paniculata_contig2154:9748..15016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2154.5682.1 ID=mRNA_H-paniculata_contig2154.5682.1|Name=mRNA_H-paniculata_contig2154.5682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5269bp|location=Sequence derived from alignment at H-paniculata_contig2154:9748..15016- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCGGAAATTGCGTGCCCACCCTACGCCCGACACGAATATCAACTTGTG
GAAGCATCCTATTCCTTGGAGCAGGTGCATACATATACTGGTTGGTAGAC
AGGCCACGGCTATGCCAGTGGCGGCGACCATTTTGAAGAGGCGCCGTACG
CACATTGACTCCCTTAAGCTGGCATATGGTAGGCACAACTAACATTCAAG
TTTGGCTAACACCACCATCTCGCTCCCTTCGTATACTCCGAGGATGTACT
TGAAATATATATATGCATTTTTTTATTGATGAGTATACATGGTCAGGCAC
GAGCATAATACAATTAATGGTGATTCATCAATTCATGAGATATGGTGTTC
ATTTCGTTTATTTGTTGTAATAAGTATCTTCGATCATGTTCAATTAAAAA
CAGTTATTGACTAACAGATAGCTAGCAGACAACACAGGAGGCAATGCAGC
GAGGTTTGACAGACAGCAAAATTACCCGACCGGGTGGCCAGCGCCGGGTG
TGCATGTATTACTTTTCAAACTCCGACGATATCGCCCTCACACAGGATTA
TTATGATGATGACGATGATGACAAGGCGAAGGAGGAAGAGGAGGAAGGGT
ACATTAACCGCCGACCCGATGCCCAACAAGGTCAACTCGACATAGCGTTG
CGATCCTTGGAGGAGGTATGTACGTACTACTTGAAGCAATCCTGGTACAT
GGTTAGGCAGCACTTGAAGCAATACTGATCTATGCAATAATAGGGATTAA
CCAGGCGTTCAACTGGATGGTGTTCGTCTTCCGATTGTTGATGGATGCAT
GCATGTGTATATTTCATTGAAAAAGAGTAATATTCCACCCACAAATACAT
TCAAAAGTCTTTCAAAAGTCATTCAAAAGTGTATCTACTAAAAAAAACCC
CAGCAAAACATAGTACCGTCCTTGCAGTACGTAGTGAGAGATCCCAAACT
GTGGCATCGTTACGCAGGTTTTATCTGGTGGAAACATACATGCTGTATCT
GCCATTAGATGGACATTCCTGCCGTTCGACACATGGCTCGATTTCTACAA
CAAACTGCAACAAGGGCTTGATTCTCAAAGAAATCGAGTTTGAAAACCGC
GATTGATTGCGACATGTGTTACATTATTTTGTTTTTTTGGCTCTCGCTGA
TCGCTGCCTGCCTCTTAAACGCCTGTCTCAATGCATGCCACTTCAATTTC
AGCAACAGGAGTCGATGGAGACCAAGCTAGATCGCTATGGGGAGTACAAG
GTAAAGCGAAGCAATTGTATTTCTTCAATTAGGATTAGGGTTAGGGATAG
GGTTAGGACAATGGATATAAGTCATCAGTATTCCCCTGAACGATGCGGCA
TACCTCTTTCAGGCTCAAGCCCTAAAGGCCCACTGCTCCTGTTGGAAGTG
TACTACTGACTAGTGACTATGGAGTATGGAGTAAAATGAGGGTACTTTTA
GATTCTATGAAACCTTCACCTTAGCTCGCTAAAATCTAAAATTCGTGTCA
ACGAAAGCAGCCAGCACCGCTTGCCGTTTGTTCTCTGCTGGAACACACGG
TCATTCTGTCCGACTGGCTGGCTGACTGCCTCTTACCTACCTTTGCTTGC
CTACGGCAATGCTTGTGTCAATATTTTCGATGAACCGAGGAGGTGATCGT
GACGACGCCATGACGACATATTATATACTAGTAGTGCATTTGTAAATAAT
TCACCCCTCGGACAACTACGAATACGAATACTAATACGAATACTTGCAAA
TTATTTGAACAAAAACTGAAAGTACTCGCCTGAGTTTCAAAATGGGCTGG
TGTATTCTATATGTATTCTATATGCCCCCGACCATTCACGATTGCTAATA
ATACTCGTAAATCGAATGGACAGGGGTAGGTAATTTATTCTATGTGTCCG
CTCATTCTGAAACTCAGGCGAATACTTTCAGTTTTTTGTAAAAATCATTT
GTCAGTGTTCGTATTCGTATTCGTATTCGTATTCTTATATGTCCTGGGGG
TGAAATATTTACACCAACATTGATAATGCGTTAGTAATGACGAAGCAAGC
GATTAATCTATTGGGCATCATCGGTGATCGATTTGGTACTATGTCTTGTC
AGGGGCGCGTGCTCGATCATCTGAGCACCCATGTACCCCCTTTCCCCTCC
CTCGTGTCGGCTTCTTATCTCCCTCCCTCTCTTCGTTCCTCAGGTAGGAG
GCCTGACAGACCACCAGGCATACGAATTTTGGCACAAGTTTAAGACGTCC
GAGCTTGACAATCTCGAAAGTCAGATCCAGATTCTGAAGGAAAAGGCATG
TGGGTAGATGTTGAGCTCGTGATTAGGTTTAATTCGATTGATGGGGTGCG
CGTTTTTTTTAAAACTGTTTTCACTATTGATACGCCCTAAATTCATTAGC
AATAGCCGTGCACATATGGACTTTATGATCGGGCAATCCAAAATGGCGTA
CAAAAGAAAAGGAACGATTTCATTGCTATATTAAAATATACTATAATATA
CAAGAAATTTACGACATAACGACTTCATGACGTTAGGACAATTTCCTAAT
CTGCCGCCCAAGTTCGATACCCGTATACCTGTGCGCTGTACCCTCTGACC
GTGGATTACAGTGACTATTCTACTTGTGATGTCTCAGACAAAAATATGAC
CGTAGTGGGTGCCACTTCTTTGTTTCGGGTGGGCCCCAGAGTGCACGATG
ACCTATCTTGTTACCTATTTTGCGCGTTTGGGCCAATGTTAACGGCTTGA
GTGATTTTCGTCGCGCGTTTACAAGATGTTATATGTAAACGAAGTGTTCT
TAAAAGAAAAGGCAAGAAGATAAATATATATTTCCTTTTTCACCGAATGC
ATTCCATTTTCAGCCATGTATGTTTACTCATTACAAACTCAATCATAAAT
CATGGACCAAGTGGCGCTCTAGAGCTTTAGGGGGGTTGAATAGTACGGGA
AATTACCATACTTTGAACTTGATGGAACACCATCGCCGAATTGATTGCGC
ACTTTTTTTTTCTTTTCTTTTCTTTTCTGTTATGTTCCAGGGTCGTTCGT
TCACGGCCCCTAATTCGCCTTGGAAGAAGCTCGGAGTGAAAAGTACCAGC
AATGTGCAGCGGTTGCTGCGTCAGCTCGCAACTACGCAGCGGGACAGGGT
AAGATACGAGCGAACGATCGGAAGAACATTGTCATTGGTGTTTTTTTGAG
ATGGACATTTTTTTACGAGCATATTGCGGGAATTTTATGCCAGGTTTTTG
TCTTCAGCGCCCTGTCGCCCGTGCTGTGTTTGCCTCGCGTGCCTTGTGTG
CCTTGTGTGTGTCTAGTAATAATCAACGGAACCGGTCGGAAATTCAGGTT
GTACAGTAATGGAATGGTTGATTAATTGATTACTTGATTCAACAAACGTG
GAAAGGAGATTTGTTCTATATTTATCCATGTATTTATACCGAGCTAAATG
AGTTAGCTCTTATCATTTATAACTTTTCGTCTTCTGCCAGCTGTGTGTGC
TTTTCTTCTTTCCATGTTGCACCTATCAATATAGAAACCAGACACTTCCC
CCTCTCCCCCGCCCCCGACAATTTGGAGCAGCGACGGACCCCTCACGTTT
CGGGTCGATGGGAAAATCAACCCAAAAGGAAGTGGCCACCTCGATCCAGC
GGAAAGGTGCGCTTACAGGCAGTTACAAGAAAGTACGGGTAAGGGGTAAG
GATCCTGCTTTGAATTTGGCTTAAATACAATTCTTCGGAAGAATACCCTG
CGCGCGCAGATTCCGTCCTGCAGAGGGTTTGATTGGTAATTAGATCCAGG
TAGTACAAGTGTTATAGGTATTATAGGTCTATCTTGGTGATAAGTGACAT
GGCATTGTTATACTTGACTGGACCGATTGACTCCTCGTAGTATGCTTAGC
TACACTTGGTCGCTCTAGAAGTTGACAGGCATACTCGCCAAAGAAAAGAA
AAGAAAAACCAAAGTGCTCCTCCCCTTTCGCCTCCCCCGCGCTCTCATCT
GTTAACATAGAAAACCGCGGCGCAGATCCAGAGAGAGCACAGTACAGCTC
TTCAGGCCACATCTCCGATGGACTCGTGTGCGCACCACATCGAGCCGGCG
GGTAACACGGAGATCATCCAGGTGCTTTTGAACACGTTCGACCAAGACCT
CACGGAGATTACCGTGCTGGAGATGGGCTACGGGACCGGGTATCTTGTTC
GGCGGATGCTGGAGGCCGGCGTAAAGAAGATCCTTGCGATCGAGGCGCTA
CGGTCCGCCTGGTACTTAAAAAGTATGTTCGATTACGACGACAGGTTATC
TCTGTATGGAGTTGATGTGATGGAATTGAAGCTTGTGCGGCCCGAATGCT
TTTCGACGGTGGACGCGATCACGTGCATTATTGGCGTGGAAGAACCGACT
CTGGAAGCGCTTCGACTATTTTTCGACACCGACAACATCCGCAACATTGT
GCTGCTTTCGCCCTGCTCCGGCTTCAGGCAGCTTGTGGACACGGTGATCG
AGAGATGGTTCGAACACGACTCCGCCTTTGACTGGAATAACATCCACGTG
ACTGCGGGTCGAATTCCCAGCGTCAAGCTCAGCGGATCAGGCAACCTGAG
GCACCTGTGGTGGTTGCGGAAGTCCAAGACCATGCGGGCGAGGCGTAGCT
GTTCAACGAGGGCTGCTAAGAATAGGATGGCCCAAGACGTACGGGACGCT
CTCGCGTCGAAAAAATGTGAACAGTGACAAAAATAAATAACAGAAAAGCA
GTAAGTAATTAGGCAGAGGCGAAGGCCAGACTTTCCGCTGTACTAGGTAA
ACAACGGAGGTAGATAGGTGATGGGTGGGTGGGTTATATTGCTGGCCGAT
GGGTGGATTGATTGATTGATTGATTGATTGGATTGCCCCAGCAGTCAAAG
TACCCACATTGGTTAGCCTTTGTTGTCCATGTTATTTTAGGTGTCGAAAA
TGAGAGATACAAGGCCCCTCGTTCGTATTTTCCCGACTTTACGAAAGAAA
AATAGCAGTAGTCGAATTATTTCGAAAAGTACAGTACAAACGGGACGGGA
TTGACTGGCAAGGGATTTTGAGGTTCTAAAATCTAGATTCTTCAATTAAC
CCATCGGCATGCAAACTTTCTTCGAAGCAGTACCATAAAGACATAGCGAG
ATGGGGGAAGGGTTCAGTCAGTAGTAAAGAATAATCGCTATTCCTGGCGT
ATGTCGTATGTCGTATGTCTTACGCCGTATCTCAGAGAGAAGCTGAGTTG
TACATTGCGGGCGGCGACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2154:9748..15016- >mRNA_H-paniculata_contig2154.5682.1 ID=mRNA_H-paniculata_contig2154.5682.1|Name=mRNA_H-paniculata_contig2154.5682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at H-paniculata_contig2154:9748..15016- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGACCAAGCTAGATCGCTATGGGGAGTACAAGATGGAGACCAAGCT
AGATCGCTATGGGGAGTACAAGGTAGGAGGCCTGACAGACCACCAGGCAT
ACGAATTTTGGCACAAGTTTAAGACGTCCGAGCTTGACAATCTCGAAAGT
CAGATCCAGATTCTGAAGGAAAAGGTAGGAGGCCTGACAGACCACCAGGC
ATACGAATTTTGGCACAAGTTTAAGACGTCCGAGCTTGACAATCTCGAAA
GTCAGATCCAGATTCTGAAGGAAAAGGGTCGTTCGTTCACGGCCCCTAAT
TCGCCTTGGAAGAAGCTCGGAGTGAAAAGTACCAGCAATGTGCAGCGGTT
GCTGCGTCAGCTCGCAACTACGCAGCGGGACAGGGGTCGTTCGTTCACGG
CCCCTAATTCGCCTTGGAAGAAGCTCGGAGTGAAAAGTACCAGCAATGTG
CAGCGGTTGCTGCGTCAGCTCGCAACTACGCAGCGGGACAGGCGACGGAC
CCCTCACGTTTCGGGTCGATGGGAAAATCAACCCAAAAGGAAGTGGCCAC
CTCGATCCAGCGGAAAGCGACGGACCCCTCACGTTTCGGGTCGATGGGAA
AATCAACCCAAAAGGAAGTGGCCACCTCGATCCAGCGGAAAGAAAACCGC
GGCGCAGATCCAGAGAGAGCACAGTACAGCTCTTCAGGCCACATCTCCGA
TGGACTCGTGTGCGCACCACATCGAGCCGGCGGGTAACACGGAGATCATC
CAGGTGCTTTTGAACACGTTCGACCAAGACCTCACGGAGATTACCGTGCT
GGAGATGGGCTACGGGACCGGGTATCTTGTTCGGCGGATGCTGGAGGCCG
GCGTAAAGAAGATCCTTGCGATCGAGGCGCTACGGTCCGCCTGGTACTTA
AAAAGTATGTTCGATTACGACGACAGGTTATCTCTGTATGGAGTTGATGT
GATGGAATTGAAGCTTGTGCGGCCCGAATGCTTTTCGACGGTGGACGCGA
TCACGTGCATTATTGGCGTGGAAGAACCGACTCTGGAAGCGCTTCGACTA
TTTTTCGACACCGACAACATCCGCAACATTGTGCTGCTTTCGCCCTGCTC
CGGCTTCAGGCAGCTTGTGGACACGGTGATCGAGAGATGGTTCGAACACG
ACTCCGCCTTTGACTGGAATAACATCCACGTGACTGCGGGTCGAATTCCC
AGCGTCAAGCTCAGCGGATCAGGCAACCTGAGGCACCTGTGGTGGTTGCG
GAAGTCCAAGACCATGCGGGCGAGGCGTAGCTGTTCAACGAGGGCTGCTA
AGAATAGGATGGCCCAAGACGTACGGGACGCTCTCGCGTCGAAAAAATGT
GAACAGTGAAAAACCGCGGCGCAGATCCAGAGAGAGCACAGTACAGCTCT
TCAGGCCACATCTCCGATGGACTCGTGTGCGCACCACATCGAGCCGGCGG
GTAACACGGAGATCATCCAGGTGCTTTTGAACACGTTCGACCAAGACCTC
ACGGAGATTACCGTGCTGGAGATGGGCTACGGGACCGGGTATCTTGTTCG
GCGGATGCTGGAGGCCGGCGTAAAGAAGATCCTTGCGATCGAGGCGCTAC
GGTCCGCCTGGTACTTAAAAAGTATGTTCGATTACGACGACAGGTTATCT
CTGTATGGAGTTGATGTGATGGAATTGAAGCTTGTGCGGCCCGAATGCTT
TTCGACGGTGGACGCGATCACGTGCATTATTGGCGTGGAAGAACCGACTC
TGGAAGCGCTTCGACTATTTTTCGACACCGACAACATCCGCAACATTGTG
CTGCTTTCGCCCTGCTCCGGCTTCAGGCAGCTTGTGGACACGGTGATCGA
GAGATGGTTCGAACACGACTCCGCCTTTGACTGGAATAACATCCACGTGA
CTGCGGGTCGAATTCCCAGCGTCAAGCTCAGCGGATCAGGCAACCTGAGG
CACCTGTGGTGGTTGCGGAAGTCCAAGACCATGCGGGCGAGGCGTAGCTG
TTCAACGAGGGCTGCTAAGAATAGGATGGCCCAAGACGTACGGGACGCTC
TCGCGTCGAAAAAATGTGAACAGTGA back to top
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