mRNA_H-paniculata_contig21536.5680.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 295 bits (756), Expect = 7.510e-99 Identity = 156/220 (70.91%), Postives = 174/220 (79.09%), Query Frame = 1
Query: 1 MKTSFYAADG-AVAAWFVVPSAHAM-VATAQQQITAFNSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLPSDDD 654
MKTSF +A G VAA F+ +A A V TAQQQIT FN EDFVF LGGPEPD + GFQ R A + QIPAL+GQG+AM L NL+ C INLPH HP ATEM YVI GEHLRVAFVEE GEGAVVNDL QGDVTF+PQGLIHY+QNL CE T+L+ALNN+DPG VTITTRFF+LPSEAIQASLNF+DP L+ LIESLP+AP ARRQ L+RCGL D
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVD-GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGD 219
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 287 bits (735), Expect = 1.490e-95 Identity = 148/214 (69.16%), Postives = 173/214 (80.84%), Query Frame = 1
Query: 1 MKTSFYAADGAVAAWFVVPSAHAM-VATAQQQITAFNSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGL 639
MKTSF AA G V A ++ + V T QQQIT +N EDFVF+LGGPEPD + GFQ R A VNQ+PAL+GQG++M L NL+PCAINLPH HP ATEM+YVI+GE LRVAFVEE GEGAVVNDL QGDV F+PQGLIHYQQNLDCE AT+L+ALNNEDPG +TITTRFF+LP EAIQAS+NF++P L+ LIESLP+AP AR+Q LQRC +
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVD-GFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRM 213
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 146 bits (368), Expect = 2.110e-39 Identity = 76/184 (41.30%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 103 FNSEDFVFNLGGPEPDDRDE*GFQNRVANVN--QIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLPSD 648
F++EDFVF+ D G + VN + P ++ G++ F++ PC INLPH HP ATE LY+I G+ + + FV D ++NDL + VTF+P+G +HYQQN++CE+A ++S L+NEDPGV+ +++ LP EA+ A+ N D + L LPE P AR + L RCGL D
Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQ-VTLGFVSTEDR--LIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGLDMD 285
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 142 bits (357), Expect = 1.070e-38 Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 1
Query: 103 FNSEDFVFNLGGPEPD---DRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLP 642
F++EDFVF+ E D D G ++ AN+N P ++ +A F + PC INLPH HP TE Y+I GE L V FV E V+ND+ TF+PQGL+HYQQN+ CE A ++S L++ DPG++ I LP EAI A+ + D+ + + LP+ P R + L RCGLP
Sbjct: 22 FDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVME--SGRTVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGLP 201
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 140 bits (354), Expect = 2.950e-37 Identity = 73/179 (40.78%), Postives = 106/179 (59.22%), Query Frame = 1
Query: 103 FNSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGL 639
F++EDFV + +P + G ++ AN N +P ++ +A F + PC INLPH HP TE +Y+I G L V FV E G ++ND+ TF+PQGL+HYQQN+ CE A ++S LN+ DPG++ I +LPSEA++A+ + D + L LP P R + L+RCGL
Sbjct: 119 FDAEDFVIDFA-TQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGA-LTVGFVTE--GGRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 129 bits (325), Expect = 1.340e-33 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 79 TAQQQITAFNSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFD-LPSEAIQASLN-FDDPTLKALIESLPEAPTLARRQFLQRCGL 639
T Q+++ +++DFVFN + G + A PAL G +AM + + PC+INLPH HP ATE+ ++ +G+ F EE +G +VN L++G+VT +P G IH++QNL+CE A +++A N+EDPGV TI + F LP++ + ASL +K L + LP+ P + ++ +RCGL
Sbjct: 47 TETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGK-FEAGFFEE-NGARFIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: L8H6S8_ACACA (Spherulin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6S8_ACACA) HSP 1 Score: 129 bits (323), Expect = 2.870e-33 Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 79 TAQQQITAFNS--EDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLN-FDDPTLKALIESLPEAPTLARRQFLQRCGLPSD 648
TA Q+ N+ +DF+F+ G G + A PAL G GVAM + L PC INLPH HP ATE +V G F+E +G V+ ++ QG +PQG IH++QN++CE A +++ NNEDPGV TI + FF LP+ + ASL + +++ L LP+ P L + +RCGL D
Sbjct: 47 TAASQVDRVNALGDDFIFDFRGTLGVSEGR-GGKTVAATARNFPALIGNGVAMTVGYLGPCGINLPHTHPRATEFNFVASGAFEAGFFME--NGNEFVMTNVTQGMAVVFPQGAIHFEQNMNCEPAVFVAGFNNEDPGVSTIASNFFGLPTAIVGASLGGLNISSVEDLRAMLPDNPALGTEECRRRCGLSLD 236
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA) HSP 1 Score: 131 bits (330), Expect = 1.700e-32 Identity = 75/184 (40.76%), Postives = 103/184 (55.98%), Query Frame = 1
Query: 103 FNSEDFVFNLGGPE--PDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLPSD 648
F++EDFVF+ P D G + ++ P ++ +A F++ PC INLPH HP TE LYVI G L V FV E V+ND+ + TF+P+GL+HYQQN+ C A ++S L+ DPGV+ IT LP EA+ A+ D + L LP+ P AR + L+RCGL SD
Sbjct: 228 FDNEDFVFDFSDSNAVPVDSTGNGGTIQPVDIEGFPVMQLADMAYSRFSIGPCGINLPHLHPRGTESLYVIDGM-LTVGFVAE--SGRLVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVITESLNALPDEALTATFGEDQEFINQLRLGLPDGPARARSECLKRCGLSSD 408
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.850e-32 Identity = 75/187 (40.11%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 106 NSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVI--RGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFF------DLPSEAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLP 642
++ DF F+L G + + G + + Q+P+L G+ VAMV LEPC INLPH HP ATE+LYV+ E + AFVEE +G + N + G+ F+PQGL H Q N+ C AT ++AL ++D GV TITT D E + A+L L LI P+ P + + QRCGLP
Sbjct: 57 DNTDFKFDLDGSKATTGNG-GGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEE-NGGRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGLP 241
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.700e-32 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 106 NSEDFVFNLGGPEPDDRDE*GFQNRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPCATEMLYVI--RGEHLRVAFVEEIDGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCESATYLSALNNEDPGVVTITTRFFDLPS------EAIQASLNFDDPTLKALIESLPEAPTLARRQFLQRCGLP 642
++ DF F+L G + G + + Q+P+L G+ VAMV LEPC INLPH HP ATE+LYV+ E + AFVEE +G + N + G+ F+PQGL H Q N+ C AT ++AL ++D GV TITT + + E + A+L L LI P+ P + + QRCGLP
Sbjct: 6 DNTDFKFDLAGSTATAGNG-GGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEE-NGGRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGLP 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21536.5680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21536.5680.1 >prot_H-paniculata_contig21536.5680.1 ID=prot_H-paniculata_contig21536.5680.1|Name=mRNA_H-paniculata_contig21536.5680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp MVLFNLEPCAINLPHEHPCATEMLYVIRGEHLRVAFVEEIDGEGAVVNDLback to top mRNA from alignment at H-paniculata_contig21536:1104..3129+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21536.5680.1 ID=mRNA_H-paniculata_contig21536.5680.1|Name=mRNA_H-paniculata_contig21536.5680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2026bp|location=Sequence derived from alignment at H-paniculata_contig21536:1104..3129+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21536:1104..3129+ >mRNA_H-paniculata_contig21536.5680.1 ID=mRNA_H-paniculata_contig21536.5680.1|Name=mRNA_H-paniculata_contig21536.5680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig21536:1104..3129+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |