mRNA_H-paniculata_contig21534.5678.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI) HSP 1 Score: 157 bits (398), Expect = 4.620e-44 Identity = 77/116 (66.38%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 1 QDALEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKVRTTS 348
QDALEV +R+VD DD FGR HGVY SAL+D ALMLKS+G+ AT+TYLKALEVYR YKGEEN SFA+TLHNLGM F+AM++ LE++PL+ERA E+F+RCV+IREK+ T +
Sbjct: 151 QDALEVAERLVDQVDDHFGRAHGVYGSALSDMALMLKSMGRHQEATETYLKALEVYRAVYKGEENASFASTLHNLGMLFRAMAEDSKKLEKIPLMERAAESFERCVQIREKILTNN 266
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A1V9Z3R8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3R8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.100e-13 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 QDALEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREK 333
+ AL++ + D + FG +H VYAS LN+ ALM K++ +L A +TY +AL VY+ GE + SFA T+HNLG ++ S + +++V ++ A E FQ + IR++
Sbjct: 295 ESALDIAEICRDNVKEHFGTEHPVYASTLNNIALMQKNLSKLTEAIETYEEALRVYKECV-GENHASFATTMHNLGGVYRLQSHSLSGMKKVEAMDYALEYFQESLRIRQE 404
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A1V9Z175_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z175_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.100e-13 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 QDALEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREK 333
+ AL++ D + FG+ H VYAS LN+ ALM K++ QL A TY +AL VY+ GE + SFA TLHNLG ++ S + +++V L+ A + FQ + IR++
Sbjct: 301 ESALDMATICRDRVAEHFGKDHPVYASTLNNMALMQKNMSQLTEAIATYEEALRVYKECV-GESHASFATTLHNLGGVYRLQSHILSGMQKVEALDNALDAFQESLRIRKE 410
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A067CX27_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CX27_SAPPC) HSP 1 Score: 74.3 bits (181), Expect = 2.240e-13 Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 7 ALEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREK 333
AL++ D D FG H VYAS LN+ ALM K++ QL A TY +AL VY+ GE + SFA TLHNLG ++ S + +++V L+ A + FQ + IR++
Sbjct: 75 ALDMALICRDTVKDHFGNDHPVYASTLNNIALMQKNLSQLTDAIATYEEALRVYKECV-GEGHASFATTLHNLGGVYRLQSHVLSGMQKVEALDNALDCFQESLRIRKE 182
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A6G0W6Z6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6Z6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.830e-12 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKV 336
LE+ Q D D G H VYAS LN+ ALM K++ QL + TY AL VY T GE++ S+A TLHNLG ++ S + + +V L++A E F+ + +R ++
Sbjct: 58 LEIAQICRDAVKDHLGEDHPVYASTLNNVALMQKNLTQLDESISTYEAALRVY-TNCVGEKHASWATTLHNLGGVYRLKSHGLSGMNKVAALDQALECFEESLRVRREI 165
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A024UG34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG34_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.080e-12 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKV 336
LE+ + D D FG H VYAS LN+ ALM K++ QL A ++Y AL VY++ GE + S+A TLHNLG ++ + + +++V L+ A E F+ + +R ++
Sbjct: 72 LEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMKKVEGLDHALECFEESLRVRREI 179
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: W4GGN5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGN5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.020e-10 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKV 336
LE+ + D D FG H VYAS LN+ ALM K++ L A +Y AL VY++ GE + S+A TLHNLG ++ + + +++V ++ A E F+ + +R +
Sbjct: 73 LEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDI 180
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A397DE51_9STRA (EF-hand domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE51_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.480e-10 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKV 336
LE+ + D D FG H VYAS LN+ ALM K++ L A +Y AL VY++ GE + S+A TLHNLG ++ + + +++V ++ A E F+ + +R +
Sbjct: 70 LEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDI 177
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A3L6VBZ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBZ1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.470e-10 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQ 309
LE+ + D D FG H VYAS LN+ ALM K++ L A +Y AL VY++ GE + S+A TLHNLG ++ + + +++V ++ A E F+
Sbjct: 73 LEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFE 171
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Match: A0A485LCH3_9STRA (Aste57867_19411 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCH3_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.070e-10 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 10 LEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLKALEVYRTAYKGEENVSFAATLHNLGMTFKAMSQQGNSLERVPLLERAEETFQRCVEIREKV 336
LE+ + D FG +H VYAS LN+ ALM K++ L + TY AL VY+ A GE + S+A TLHNLG + S ++++ L+ A E F+ + +R +
Sbjct: 79 LEIAEICRDTVKVHFGEEHPVYASTLNNMALMQKNLSLLEESIATYEHALRVYK-ACVGENHASWATTLHNLGGVHRLHSHALTGMKKIESLDLALECFEESLRVRRDI 186 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21534.5678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21534.5678.1 >prot_H-paniculata_contig21534.5678.1 ID=prot_H-paniculata_contig21534.5678.1|Name=mRNA_H-paniculata_contig21534.5678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp QDALEVTQRVVDMTDDLFGRKHGVYASALNDQALMLKSIGQLAAATDTYLback to top mRNA from alignment at H-paniculata_contig21534:3166..4098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21534.5678.1 ID=mRNA_H-paniculata_contig21534.5678.1|Name=mRNA_H-paniculata_contig21534.5678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=933bp|location=Sequence derived from alignment at H-paniculata_contig21534:3166..4098+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21534:3166..4098+ >mRNA_H-paniculata_contig21534.5678.1 ID=mRNA_H-paniculata_contig21534.5678.1|Name=mRNA_H-paniculata_contig21534.5678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig21534:3166..4098+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |