mRNA_H-paniculata_contig2149.5659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.460e-32 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRTMNLGTNCRYSNGPPARVEVEDGFFSMRRKQVTHYTYRVKNNKVAWL 648
W +L+ P K + +LA+SKRLESVRKDVECFFGI+KG FRILKL I + + +DNV T CILHNML+S+D E + + GL +AW H+ + S+ VEVE GF + R++ + + YR N +AWL
Sbjct: 94 WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.130e-31 Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRTMNLGTNCRYSNGPPARVEVEDGFFSMRRKQVTHYTYRVKNNKVAWL 648
W +L+ P K + +LA+SKRLESVRKDVECFFGI+KGRFRILKL I + + +DNV T CILHNML+S+D E + + GL +AW H+ + S+ VEVE GF + R++ + + YR N +AWL
Sbjct: 335 WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 121 bits (304), Expect = 2.860e-31 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRT--MNLGTNCRYSNGPPARVEVEDG--------FFSMRRKQVTHYTYRVKNNKVAWL 648
W +L+ P K A E+ A+S+ LESVRKDVECFF ILKGRFRILKL + +R +DN+ T CILHNML++FDG+ + E D+D GL D W HD T ++G+ + S E ++++ + ++YR ++N + WL
Sbjct: 12 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFDILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWL 168
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5L7R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.800e-31 Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = -1
Query: 223 ELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRTMNLGTNCRYSNGPPARVEVEDGFFSMRRKQVTHYTYRVKNNKVAWL 603
+LA+SKRLESVRKDVECFFGI+KGRFRILKL I + + +DNV T CILHNML+S+D E + + GL +AW H+ + S+ VEVE GF + R++ + + YR N +AWL
Sbjct: 64 DLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDMAWL 195
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5K5C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C1_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.220e-29 Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRT--MNLGTNCRYSNGPPARVEVEDG--------FFSMRRKQVTHYTYRVKNNKVAWL 648
W +L+ P K A E+ A+S+ LESVRKDVECFFGILKGRFRILKL + +R +DN+ T CILHNML++FDG+ + E D+D GL D W HD T ++G+ + S E ++++ + ++YR ++N + WL
Sbjct: 333 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKKDIDNIFYTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWL 489
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 122 bits (306), Expect = 2.210e-29 Identity = 74/148 (50.00%), Postives = 91/148 (61.49%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFD--GLKLHEPDMDGLLDAWLHD--DRTMNLGTNCRYS-NGPPARVEVEDGFFSMRRKQVTHYTYR-VKNNKVAWL 648
WR+L+ P K R +L +SKRLES RKDVEC+FGILKGRFRI KL I F + +DNV T CILHNML+SFD G EP+ G A LH+ DR N + S +G VEVE GF ++R K VT++ YR K + WL
Sbjct: 260 WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG--SAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.810e-29 Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = -1
Query: 217 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMDGLLDAWLHDDRTMNLGTNCRYSNGPP---ARVEVEDGFFSMRRKQVTHYTYRVKNNKVAWLRS 648
W+ L P + +++ E +S++LESVRKD EC FG++KGRFRI K+ L+R+ +DN+ T ILHNML ++DG++L EPD D A D N+ + P A VE +DGF ++R+K VT++ YR V W RS
Sbjct: 39 WKQLQSPIRAPSSKAESGFSRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDW---AGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 182
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 122 bits (306), Expect = 6.390e-29 Identity = 74/148 (50.00%), Postives = 91/148 (61.49%), Query Frame = -1
Query: 223 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFD--GLKLHEPDMDGLLDAWLHD--DRTMNLGTNCRYS-NGPPARVEVEDGFFSMRRKQVTHYTYR-VKNNKVAWL 648
WR+L+ P K R +L +SKRLES RKDVEC+FGILKGRFRI KL I F + +DNV T CILHNML+SFD G EP+ G A LH+ DR N + S +G VEVE GF ++R K VT++ YR K + WL
Sbjct: 351 WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG--SAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JMK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK5_9PHAE) HSP 1 Score: 115 bits (289), Expect = 2.010e-28 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = -1
Query: 361 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWLHDDRT 648
W +L+ P K A E+ A+S+ LESVRKDVECFFGILKGRFRILKL + +R +DN+ T CILHNML++FDG+ + E D+D GL D W HD T
Sbjct: 2 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLT 102
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Match: A0A6H5JLC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC3_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.120e-28 Identity = 62/150 (41.33%), Postives = 88/150 (58.67%), Query Frame = -1
Query: 217 WRSLVCPGKEAATREELAWSKRLESVRKDVECFFGILKGRFRILKLPILFRESA*VDNVV*T*CILHNMLYSFDGLKLHEPDMD-----GLLDAWL-HDDRTMNLGTNCRYSNGPPARVEVEDGFFSMRRKQVTHYTYRVKNNKVAWLRS 648
W+ L P + + + E + ++LESVRKD EC FG++KGRFRI K+ L+R +DN+ T ILHNML ++DG++L EPD D G LD + H D M+ T+ A VE + GF ++R+K VT++ YR V W RS
Sbjct: 8 WKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRTKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDEDIVHPDVRMSAPTH------EDAVVECDAGFEALRQKLVTNFAYRWGQGTVGWKRS 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2149.5659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2149.5659.1 >prot_H-paniculata_contig2149.5659.1 ID=prot_H-paniculata_contig2149.5659.1|Name=mRNA_H-paniculata_contig2149.5659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp MKIHTALCPIYTLKSFLTRLRSQPSHFVVFHPVCVVRDLLPSHGEKPVLDback to top mRNA from alignment at H-paniculata_contig2149:571..1218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2149.5659.1 ID=mRNA_H-paniculata_contig2149.5659.1|Name=mRNA_H-paniculata_contig2149.5659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=648bp|location=Sequence derived from alignment at H-paniculata_contig2149:571..1218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2149:571..1218+ >mRNA_H-paniculata_contig2149.5659.1 ID=mRNA_H-paniculata_contig2149.5659.1|Name=mRNA_H-paniculata_contig2149.5659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at H-paniculata_contig2149:571..1218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |