mRNA_H-paniculata_contig21476.5654.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A6H5KUU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU7_9PHAE) HSP 1 Score: 246 bits (627), Expect = 3.660e-78 Identity = 131/208 (62.98%), Postives = 155/208 (74.52%), Query Frame = 1
Query: 1 YAVNGRHRRFVMSPVSCASQAXXXXXXXXXXXXXXXXXXXXXXXXVQRSKIDKESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCAADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGG---KAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVA 615
+A + RR P+ C SQ XXXXXXX + K DK SFVQWDMRRAAMKLHTR+Q+PKEG+QENKG ++WKP+RRGYLQFLVDSK+VYEALEE C +DPRL++FR+TGLERTEAL +D+AW++ETY D+ GG KAPSPTE +LEYAS LR + SSLPAFMCH++N YFAHTAGGRMIGRKVA
Sbjct: 51 WAASPLRRRAAAVPLWCTSQTTDVAATAEGKGAKKEEXXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTPFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLETYSDSWAEGGGGDGKAPSPTENALEYASFLREKVASSLPAFMCHYYNHYFAHTAGGRMIGRKVA 258
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: D7FK52_ECTSI (Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK52_ECTSI) HSP 1 Score: 244 bits (624), Expect = 2.140e-76 Identity = 128/208 (61.54%), Postives = 153/208 (73.56%), Query Frame = 1
Query: 1 YAVNGRHRRFVMSPVSCASQAXXXXXXXXXXXXXXXXXXXXXXXXVQRSKIDKESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCAADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGG---KAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVA 615
+A + RR P+ C SQ XXXXXX + K DK SFVQWDMRRAAMKLHTR+Q+PKEG+QENKG ++WKP+RRGYLQFLVDSK+VYEALEE C +DPRL++FR+TGLERTEAL +D+AW++E YPD+ GG KAPSPTE +LEYAS LR + S+LP FMCH++N YFAHTAGGRMIGRKVA
Sbjct: 51 WAASSFRRRAAAVPLWCTSQTTDVAATAEGKGAKKEEGXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTKFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLEAYPDSWAEGGGGDGKAPSPTENALEYASFLREKVASTLPGFMCHYYNHYFAHTAGGRMIGRKVA 258
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A835Z600_9STRA (Heme oxygenase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z600_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.550e-50 Identity = 85/158 (53.80%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 145 SKIDKESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCAADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVAN 618
SK D SFVQ +MR AMKLHTR+QAP+EG+QE G EW PTR GYLQFLVDS+ VY +E A+ L+ RDTGLERT AL +D+AW++ETYP+ T P ++ + Y + L+ S+P F+CHF+N YFAHTAGG MIG+KVA+
Sbjct: 2 SKADPNSFVQGEMRGVAMKLHTRDQAPREGQQEETGKKFAEWAPTRAGYLQFLVDSRAVYSTFDEVVGANDALAALRDTGLERTAALEKDIAWMLETYPELAT------PPVSDNAAAYCAFLKDIAAKSVPGFVCHFYNHYFAHTAGGIMIGKKVAD 153
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A2V0PH09_9CHLO (Heme oxygenase chloroplastic-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH09_9CHLO) HSP 1 Score: 152 bits (385), Expect = 1.690e-42 Identity = 82/163 (50.31%), Postives = 111/163 (68.10%), Query Frame = 1
Query: 136 VQRSKIDKESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEE--TCAADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVAN 618
V +++ K+ F+ +MR AMKLHTR+QAPKEG+QE+K P + W PTR GY++FL +SK+VY+A EE T A P F++TGLER++ L +D+AW + Y AT +P EYA+LLR+ S PAF+CH++N YFAHTAGGRMIG KVA+
Sbjct: 38 VGATELKKQGFI-GEMRAVAMKLHTRDQAPKEGKQESKQP-MTAWTPTREGYVRFLAESKVVYDAFEEITTKAEHPEYKLFQNTGLERSKPLEKDLAWFQQQYGIATPQLPADSPG-----REYAALLRTLASSDPPAFICHYYNYYFAHTAGGRMIGSKVAS 193
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A7S1SR94_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SR94_9CHLO) HSP 1 Score: 152 bits (383), Expect = 5.870e-42 Identity = 81/151 (53.64%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 178 DMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCA--ADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEIS--LEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVAN 618
+MR+ AMKLHTR QAPKEG+ E+K P + PTR GYLQFLV+SK+VY+ LE T A A P+ + F+++GLER+EALA+D+AW+ +TY + P P E +EY+ LLR + PAF+CH++N YFAHTAGGRMIG KVA+
Sbjct: 74 EMRQVAMKLHTREQAPKEGKAESKSPP-RAFAPTREGYLQFLVESKVVYDTLETTIAEAASPQFTGFQNSGLERSEALAKDIAWMRDTYDL-------EVPEPKEDGPGMEYSRLLREFATNDPPAFICHYYNTYFAHTAGGRMIGNKVAS 216
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: C1E2W1_MICCC (Heme oxygenase n=2 Tax=Micromonas TaxID=38832 RepID=C1E2W1_MICCC) HSP 1 Score: 151 bits (382), Expect = 1.180e-41 Identity = 81/158 (51.27%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 154 DKESFVQWDMRRAAMKLHTRNQAPKEGEQE--NKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCA--ADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVA 615
+K+ FV+ +MR AM++HTR QAPKEG+ E + + +W+PTR GYL+FLV+SK VY+A+E A A P DF DTGLER E LA+D+ W +TY G +AP EYAS LR ++S P F+CHF+N+YFAH+AGGRMIGRKV+
Sbjct: 79 EKKGFVE-EMRFVAMRMHTREQAPKEGKAEPAKEAKPMAQWQPTREGYLRFLVESKAVYDAMEAIVASGASPMYGDFVDTGLERAEGLAKDIEWFCQTY-------GMEAPVADGPGAEYASFLRDISKTSPPEFICHFYNVYFAHSAGGRMIGRKVS 228
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A7R9TEH2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TEH2_9VIRI) HSP 1 Score: 147 bits (370), Expect = 1.400e-40 Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 157 KESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCA---ADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVAN 618
KE +MR AMKLHT+ QAPKEG+ E +++W+PTR Y Q+LVDSK+VY+ALEE A AD L+ F+ TGLER ALA+D+ + Y G KAP PTE YA+ LR S +P FMCH++N+YFAHTAGGR IG+ +++
Sbjct: 19 KEDGFLGEMRAYAMKLHTKEQAPKEGQAEEPSKPMSKWEPTRELYAQYLVDSKVVYDALEEVVASAPADSPLAVFQSTGLERGPALAKDLEFFESEY-------GIKAPEPTEAGSGYAAFLREKAASDVPGFMCHYYNVYFAHTAGGRQIGKMLSD 168
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A0K9QJY3_SPIOL (Uncharacterized protein n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QJY3_SPIOL) HSP 1 Score: 145 bits (367), Expect = 4.520e-40 Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 157 KESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLN---EWKPTRRGYLQFLVDSKIVYEALEETC--AADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVANR 621
K+ FV+ +MRR AMKLHT+ QAPKEGE+ KGP +W PT GYLQFLVDSK+VY+ +E A ++FR+TGLER+++LA+D+ W E G P P+E + YA+ L Q AF+CHF+N+YFAH+AGGRMIGRKV+ +
Sbjct: 23 KKGFVE-EMRRVAMKLHTKEQAPKEGEKVAKGPEERSPAKWDPTVEGYLQFLVDSKLVYDTMERIVDEATVSYYAEFRNTGLERSQSLAKDLEWFKE--------QGYSIPEPSEPGVTYANCLEELAQKDPQAFICHFYNVYFAHSAGGRMIGRKVSEK 173
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A7S1TIA0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA0_9RHOD) HSP 1 Score: 146 bits (368), Expect = 1.730e-39 Identity = 76/162 (46.91%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 139 QRSKIDKESFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCAA--DPRLSDFRDTGLERTEALARDVAWL-VETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVA 615
+R ++ FV+ +MR AM+LHTR+QAP+EG QE ++EW+P+ R YLQFLVDSK++Y+ +E+T A+ DP LS+FRDTGLER+ LA D+ WL + P ++ K +Y L + L+S PAF+CH++N YFAHTAGGRMIG+ ++
Sbjct: 79 ERRPGSRKGFVE-EMRFVAMRLHTRDQAPREGTQEESALPISEWRPSLRDYLQFLVDSKLIYDFMEQTVASTDDPMLSEFRDTGLERSGPLADDIQWLETQNVPRCEPSAAAK---------KYVDYLTNLLESRQPAFLCHWYNYYFAHTAGGRMIGKMMS 230
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Match: A0A6V1QVP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVP2_HETAK) HSP 1 Score: 144 bits (362), Expect = 4.460e-39 Identity = 75/151 (49.67%), Postives = 104/151 (68.87%), Query Frame = 1
Query: 163 SFVQWDMRRAAMKLHTRNQAPKEGEQENKGPVLNEWKPTRRGYLQFLVDSKIVYEALEETCAADPRLSDFRDTGLERTEALARDVAWLVETYPDATTASGGKAPSPTEISLEYASLLRSTLQSSLPAFMCHFFNLYFAHTAGGRMIGRKVA 615
SFVQ DMR AMKLHT++QA +EGEQ+ + PV ++W P YLQFLVDS++VY+ +E+ C + P L F++TGLERT AL +D+AW+ E + P+ + + YA +LR + SLP F+CH++N YFAHTAGG MIGRK++
Sbjct: 47 SFVQNDMRAYAMKLHTKDQA-REGEQKAQKPV-SKWSPEPINYLQFLVDSRLVYQTMEDICNSTPGLEKFQNTGLERTAALDQDIAWMSEKF-------SVDVPAASPLGQGYADVLREVVGRSLPGFVCHYYNHYFAHTAGGLMIGRKIS 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21476.5654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21476.5654.1 >prot_H-paniculata_contig21476.5654.1 ID=prot_H-paniculata_contig21476.5654.1|Name=mRNA_H-paniculata_contig21476.5654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp YAVNGRHRRFVMSPVSCASQASDVAATADSAEAKGRGGGHGGHGGVQRSKback to top mRNA from alignment at H-paniculata_contig21476:2497..4085+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21476.5654.1 ID=mRNA_H-paniculata_contig21476.5654.1|Name=mRNA_H-paniculata_contig21476.5654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1589bp|location=Sequence derived from alignment at H-paniculata_contig21476:2497..4085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21476:2497..4085+ >mRNA_H-paniculata_contig21476.5654.1 ID=mRNA_H-paniculata_contig21476.5654.1|Name=mRNA_H-paniculata_contig21476.5654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig21476:2497..4085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |