mRNA_H-paniculata_contig2147.5653.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2147.5653.1
Unique NamemRNA_H-paniculata_contig2147.5653.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A836CLM1_9STRA (Thiolase, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM1_9STRA)

HSP 1 Score: 498 bits (1283), Expect = 2.880e-169
Identity = 267/390 (68.46%), Postives = 304/390 (77.95%), Query Frame = 3
Query:  288 SDDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            S DDIVVV A+RTPITRAKKG FKDTTPDVLL+ VL  VL RTGV  E++GEICVGNVLQ GAGA  SR+ Q+ AGIPHTVPLSTVNRQCSSGLQAVA+VA+GI++G Y +GIAAGVE MSL +  G  P   ++ + V   ++A +  IPMGITSENVA  + V R EQD FAA SH++AH AQ+ G F EEI+PV T VK  DGA   V V  DEGIRPGT AE LA LKP FK GGSTTAGNSSQVSDG        R+RAA+LGL+ LGVFR +AV GVPP +MG+GPA AIPA + + G+   DVDV+E+NEAFASQA YCI+ELGLDP KVNP GGAIALGHPLGCTG RQVATLL+E+ RTG   GVVSMCIGTGMGAAAVFE
Sbjct:    3 SPDDIVVVAAVRTPITRAKKGAFKDTTPDVLLATVLRTVLERTGVMGEDLGEICVGNVLQHGAGAAGSRMAQMMAGIPHTVPLSTVNRQCSSGLQAVANVASGIRSGFYDIGIAAGVECMSLASMSGSVPQ--VNWDAVNACREAKDCTIPMGITSENVAAKYGVSRQEQDAFAAASHTKAHTAQQAGKFREEIVPVTTYVKDKDGALARVTVDADEGIRPGTNAEALAKLKPAFKAGGSTTAGNSSQVSDGXXXXXXXXRRRAAQLGLKVLGVFRGFAVAGVPPAVMGVGPAFAIPAVLRQTGVSKDDVDVYEINEAFASQALYCIRELGLDPLKVNPNGGAIALGHPLGCTGARQVATLLHELWRTGGHIGVVSMCIGTGMGAAAVFE 390          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: D7FX87_ECTSI (3-ketoacyl-CoA thiolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX87_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 3.050e-169
Identity = 287/431 (66.59%), Postives = 316/431 (73.32%), Query Frame = 3
Query:  225 MEACKRMDRIGLHLSARGNS---ASD--DDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGP-PAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQ------------DKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFEAC 1463
            MEA +RM+ IG HLSA   +   A D  DDIV+VDAIRTPITRA+K                                ICVGNVLQ G+GALSSRV QVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGI+AGHY+VGIAAGVESMSLNA GGGG  P   + +F+KG++  A VL+PMGITSENVA  + + R EQ            D FAAESH+RAHRAQEEG+F++EILPVRT                  G   G      A  +  FKKGG+TTAGN+SQVSDGAAA+LLMTR+ AA+ GLRPLGVFRSYAVVGVPPE+MGIGPAVAIPAAV KAGL L DVD+FELNEAFASQATYCIKELGLD  KVNPKGGAIALGHPLGCTGCRQVATLLYE+RRTG RFGVVSMCIGTGMGAAAV E C
Sbjct:    1 MEAARRMEVIGSHLSASSGALAGAQDRPDDIVIVDAIRTPITRARK--------------------------------ICVGNVLQPGSGALSSRVAQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIKAGHYSVGIAAGVESMSLNAMGGGGGLPPEKNPKFIKGERKGAGVLLPMGITSENVAAKYGITRAEQAPPPPTGGRRGEDAFAAESHARAHRAQEEGIFDDEILPVRT-----------------RGCVRGLLRPSWAASRRSFKKGGTTTAGNASQVSDGAAATLLMTRESAAQRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDVDLFELNEAFASQATYCIKELGLDAWKVNPKGGAIALGHPLGCTGCRQVATLLYELRRTGKRFGVVSMCIGTGMGAAAVLELC 382          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A6G0X911_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X911_9STRA)

HSP 1 Score: 477 bits (1227), Expect = 9.500e-161
Identity = 257/407 (63.14%), Postives = 309/407 (75.92%), Query Frame = 3
Query:  237 KRMDRIGLHLSARGNSASDDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            +R++RI  HL A    +S  +IVVV A RTPI +AK+G FKDTTPDVLL  V   VL +T ++P  +G++ VGNVLQ G+ A  +R+GQ+ AGIP+TVPLSTVNRQCSSGLQA A+VA+ I+AG+Y +GIAAGVE+MSLNA GG  P   ++ + V  ++ A N   PMGITSENVA  F + R++QD FAAESH++AH AQ+ G F +EI PV T V   DG    V V  DEG+R GTTA+ LA LKP FKKGGSTTAGNSSQVSDGAAA L+MTR+ A +LGL  LG F SYAV GVPPEIMGIGPAVAIP A+ KAGL + D+DVFELNEAFASQA YC + L +   K+NP GGAIALGHPLGCTG RQ+ATLL+ + RT   +GVVSMCIGTGMGAAAVF+
Sbjct:    2 QRIERIQQHLQA---PSSATEIVVVAATRTPIAKAKRGAFKDTTPDVLLRHVFQGVLQQTKIDPALIGDVVVGNVLQPGSAAAGARMGQLCAGIPYTVPLSTVNRQCSSGLQAFANVASAIKAGYYDIGIAAGVETMSLNAMGGQAPD--VNWDDVNANEPARNCTFPMGITSENVAEKFGISRLQQDTFAAESHAKAHAAQQNGWFTKEITPVTTKVTLADGKEQQVTVTADEGVRVGTTAQGLAKLKPSFKKGGSTTAGNSSQVSDGAAAVLVMTRQAAEKLGLPILGTFVSYAVAGVPPEIMGIGPAVAIPEALKKAGLTVDDIDVFELNEAFASQALYCAEHLKIPKHKINPTGGAIALGHPLGCTGARQIATLLHGLHRTNQTYGVVSMCIGTGMGAAAVFK 403          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: H3G9X7_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3G9X7_PHYRM)

HSP 1 Score: 472 bits (1215), Expect = 7.580e-159
Identity = 253/409 (61.86%), Postives = 316/409 (77.26%), Query Frame = 3
Query:  240 RMDRIGLHLSARGNSAS---DDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            R+DRI  H+ A+G+ A    ++D+V+V A+RTPIT+A++GGFKDTTPDVLL  VL AVL +  V+P+ VG++ VGNVLQ GAGA  +R+ Q+ AGIPHTVPL  VNRQCSSGLQAVA+V A I+AG+Y +GIAAGVE MSL   G   P   ++ E V G +DA +  +PMGITSENVA  F + R +QD+ AA SH++A  AQ  G F++EI PV T++K  DG    V++++D+G+R GTTAEKLA L+P FK+GGSTTAGNSSQVSDGAAA LLM R  A ++GL  LG F SYAV GVPP +MGIGPA AIP A+ KA L L  +DVFE+NEAFASQATYC+++LG+   KVNPKGGAIALGHPLGCTG RQ++TLLY+++R   R+GV+SMCIGTGMGAAAV E
Sbjct:    3 RIDRIRSHV-AQGSPAPVSPEEDVVIVSALRTPITKARRGGFKDTTPDVLLGHVLLAVLKQAKVDPKLVGDVVVGNVLQPGAGAGMARMAQLAAGIPHTVPLHVVNRQCSSGLQAVANVTAAIKAGYYDIGIAAGVECMSLAGIGKDAPT--VNWERVGGVQDAMDCTVPMGITSENVAEKFGISRAKQDELAALSHAKAAAAQVNGWFKQEITPVATTIKDKDGNEKAVVISQDDGVRTGTTAEKLAKLRPAFKEGGSTTAGNSSQVSDGAAAVLLMRRSVAKKMGLPILGRFVSYAVTGVPPALMGIGPAFAIPEALQKANLTLDQIDVFEINEAFASQATYCVEKLGIPMDKVNPKGGAIALGHPLGCTGARQMSTLLYQLKRKNQRYGVISMCIGTGMGAAAVIE 408          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A3M6VJG2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJG2_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 4.900e-157
Identity = 251/408 (61.52%), Postives = 311/408 (76.23%), Query Frame = 3
Query:  240 RMDRIGLHLSARGNSAS--DDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            R+DRI  H+S   N +   ++D+V+V A+RTPIT+A++GGFKDTTPDVLL  VL AVL +  V+P+ VG+I VGNVLQ GAGA  +R+ Q+ AGIPHTVPL  VNRQCSSGLQAVA+V A I+AG+Y +GIAAGVE MSL + G   P   ++ E +   +DA +  +PMGITSENVA  + + R+EQD+ AA SH++A  AQ    F++EI PV T +K  DG    V+V++D+GIR  TTAEKLA L+P FK+GGSTTAGNSSQVSDGAAA LLM R  A ++ L  LG F SYAV GVPP +MGIGP+VAIP A+ KAGL L  +DVFE+NEAFASQ  YCIK+LG+   KVNPKGGAIALGHPLGCTG RQ++TLLY+++R   R+GV+SMCIGTGMGAAAV E
Sbjct:    3 RIDRIRSHVSNGLNKSEVLEEDVVIVSALRTPITKARRGGFKDTTPDVLLGHVLQAVLHQAKVDPKLVGDIVVGNVLQPGAGAGMARMAQLAAGIPHTVPLHVVNRQCSSGLQAVANVTAAIKAGYYDIGIAAGVECMSLASIGKDVPT--VNWERIGAVQDAMDCTVPMGITSENVAEKYGISRLEQDEMAALSHAKAAAAQSNNWFKDEITPVSTIIKDKDGTEKSVIVSRDDGIRVDTTAEKLAKLRPAFKEGGSTTAGNSSQVSDGAAAVLLMRRSVAKKMRLPILGRFVSYAVAGVPPSLMGIGPSVAIPEALQKAGLTLDQIDVFEINEAFASQTAYCIKKLGIPIEKVNPKGGAIALGHPLGCTGARQMSTLLYQLKRKNQRYGVISMCIGTGMGAAAVIE 408          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A2D4CB28_PYTIN (3-ketoacyl-CoA thiolase A n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB28_PYTIN)

HSP 1 Score: 466 bits (1200), Expect = 1.600e-156
Identity = 250/413 (60.53%), Postives = 306/413 (74.09%), Query Frame = 3
Query:  237 KRMDRIGLHLSARG------NSASDDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            +R+DRI  H+          ++  DDD+VVV A+RTPIT+AK+GGFKDTTPDVLL  VL AVL +T V+P+ VG+I VGNVLQ GAGA  +R+ Q+ AGIP+ VPL  +NRQCSSGLQAVA+V + I+AG+Y +GIAAGVE MSL A G   P   +D E ++  KDA +  IPMG+TSENVA  + + R +QD  AA SH++A  AQ +G F +EI  V T     DG    ++V+KD+G+R GTT   LA LKPVFK GG+TTAGNSSQVSDGAAA LLM R  A  +GL  LG F S+AV GVPP IMGIGPA AIP A+ KA L +  +DVFE+NEAFASQA YC+++LG+   KVNPKGGAIALGHPLGCTG RQVATLL+E++R   R+GV+SMCIGTGMGAAAVFE
Sbjct:    2 ERIDRIRAHVQTPAAHTPAVHAHCDDDVVVVSALRTPITKAKRGGFKDTTPDVLLGHVLQAVLTQTKVDPKRVGDIVVGNVLQPGAGAGMARMAQLAAGIPYDVPLHVLNRQCSSGLQAVANVVSAIKAGYYDIGIAAGVECMSLAAIGQDAPT--VDWERMQASKDAMDCTIPMGVTSENVAEQYGISREKQDALAAASHAKAVHAQAQGWFRDEITVVSTKFTDKDGNDKSIIVSKDDGVRAGTTEAGLAKLKPVFKPGGTTTAGNSSQVSDGAAAVLLMCRSTAKHMGLPILGKFVSFAVAGVPPSIMGIGPAAAIPEALKKAKLSIDQIDVFEINEAFASQAVYCVEKLGIPMEKVNPKGGAIALGHPLGCTGARQVATLLHELKRRNQRYGVISMCIGTGMGAAAVFE 412          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A8K1FFU4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFU4_PYTOL)

HSP 1 Score: 464 bits (1195), Expect = 8.450e-156
Identity = 251/410 (61.22%), Postives = 303/410 (73.90%), Query Frame = 3
Query:  240 RMDRIGLHLSARGNSASD----DDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            R++RI  H+      AS     DD+VVV A+RTPIT+AK+GGFKDTTPDVLL  VL+AVLA+  V+P+ VG+I VGNVLQ GAGA  +R+ Q+ AGIPH VPL  VNRQCSSGLQAVA V + I+AG+Y VGIAAGVE MSL +      P  +    ++  KDA +  IPMGITSENVA  + + R  QD F+A SH++A +AQ+ G F +EI  V T +   DG    V+++KD+G+R GTTAE L  LKP FKKGGSTTAGNSSQVSDGAAA LLM R  A  LGL  LG F S+AV GVPP +MG+GPA AIP A+ KA L +  +DVFE+NEAFASQA YC+++LG+   KVNPKGGAIALGHPLGCTG RQV TLL+E++R   RFGV+SMCIGTGMGAAAVFE
Sbjct:    3 RIERIRSHVQTAAPGASTAPSADDVVVVSALRTPITKAKRGGFKDTTPDVLLGHVLTAVLAQHKVDPKLVGDIVVGNVLQPGAGAGMARMAQLAAGIPHDVPLRVVNRQCSSGLQAVADVVSAIKAGYYDVGIAAGVECMSLASIAQ--DPPSVCWPRIQQVKDAMDCTIPMGITSENVAEQYGISRATQDAFSATSHAKAVQAQQNGWFRDEITAVSTKITDKDGNEKAVIISKDDGVRAGTTAEGLGKLKPAFKKGGSTTAGNSSQVSDGAAAVLLMRRSVAKHLGLPVLGKFVSFAVAGVPPSVMGVGPAFAIPEALKKANLSIDQIDVFEINEAFASQAVYCVEKLGIPVEKVNPKGGAIALGHPLGCTGARQVGTLLHELKRRNQRFGVISMCIGTGMGAAAVFE 410          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: UPI00074FED69 (3-ketoacyl-CoA thiolase, peroxisomal n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FED69)

HSP 1 Score: 464 bits (1194), Expect = 1.120e-155
Identity = 249/401 (62.09%), Postives = 303/401 (75.56%), Query Frame = 3
Query:  258 LHLSARGNSASDDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGAR-FGVVSMCIGTGMGAAAVFE 1457
            L LS +   A+ +D+VVV   RTP+ +AK+G  KDTTPD LL+ V++AVL    + PE++G+ICVGNVLQ GAGAL++R+GQ  +GIP TVPLS VNRQCSSGLQAV ++A GI+ G Y +G+A GVESMSL + G  G  +   +E    +  A + LIPMGITSENVA  F V R +QD FA  S  +A RAQ+ G F+ EI+PV T++    G    V V +DEGIRPGTT E LA LKP FK+ G+TTAGNSSQVSDGAAA LL  R RA+++GL  LGV RSYAVVGVPP+IMGIGPA AIP A+ KAGL +KD+D+FE+NEAFASQA YC+++LG+ P KVNP GGAIALGHPLGCTG RQV TLL E++R G R +GVVSMCIGTGMGAAAVFE
Sbjct:   11 LALSGQARPAAPEDVVVVHGRRTPVGKAKRGALKDTTPDELLAAVMTAVLKDVQLKPEDLGDICVGNVLQPGAGALTARIGQFLSGIPATVPLSCVNRQCSSGLQAVINIAGGIRNGSYDIGLACGVESMSLRSVGNPGDVSSRMME----NSTARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAARAQQMGWFKNEIVPVTTTITNDQGKEQTVTVLQDEGIRPGTTLEGLAKLKPAFKEDGTTTAGNSSQVSDGAAAVLLARRSRASQMGLPVLGVLRSYAVVGVPPDIMGIGPAYAIPVALEKAGLTVKDIDIFEINEAFASQAVYCVEKLGIPPEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGKRGYGVVSMCIGTGMGAAAVFE 407          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A662X402_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662X402_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 1.580e-155
Identity = 249/409 (60.88%), Postives = 311/409 (76.04%), Query Frame = 3
Query:  240 RMDRIGLHLSARGNSAS---DDDIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFE 1457
            R+DRI  H+ A+G+ A    ++D+V+V A+RTPIT+A++GGFKDTTPDVLL  VL AVL +  +NP  VG++ VGNVLQ GAGA  +R+ Q+ AGIPHTVPL  +NRQCSSGLQAVA+V A I+AG+Y +GIAAGVE MSL   G   P   ++ E V   +DA +  +PMGITSENVA  + + R +QD+ AA SH +A  AQ  G F++EI PV T +K  +G    V++++D+GIR GTTAEKLA L+P FK+GGSTTAGNSSQVSDGAAA LLM R  A ++GL  LG F SYAV GVPP +MGIGPA AIP A+ KA L +  +DVFE+NEAFASQATYC+ +LG+   KVNPKGGAIALGHPLGCTG RQ++TLLY+++R   R+GV+SMCIGTGMGAAAV E
Sbjct:    3 RIDRIRSHV-AQGSPAPVTPEEDVVIVSALRTPITKARRGGFKDTTPDVLLGHVLQAVLKQAKLNPALVGDVVVGNVLQPGAGAGMARMAQLAAGIPHTVPLHVLNRQCSSGLQAVANVTACIKAGYYDIGIAAGVECMSLAGIGQDAPT--VNWERVGEVQDAMDCTVPMGITSENVAEKWGISRAQQDELAAISHQKAAAAQANGWFKDEITPVSTIIKDKEGNEKAVIISQDDGIRAGTTAEKLAKLRPAFKEGGSTTAGNSSQVSDGAAAVLLMRRSVAKKMGLPILGRFVSYAVAGVPPALMGIGPAFAIPEALQKANLSIDQIDVFEINEAFASQATYCVDKLGIPLEKVNPKGGAIALGHPLGCTGARQMSTLLYQLKRKNQRYGVISMCIGTGMGAAAVIE 408          
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Match: A0A6V1SKD4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SKD4_HETAK)

HSP 1 Score: 462 bits (1189), Expect = 5.140e-155
Identity = 251/388 (64.69%), Postives = 296/388 (76.29%), Query Frame = 3
Query:  297 DIVVVDAIRTPITRAKKGGFKDTTPDVLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPHTVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGGPPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHSRAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLAGLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYAVVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKELGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCIGTGMGAAAVFEA 1460
            ++VVV+A+RT ITRAKKG FKD+TPD LL+ V +A L R+ V+   V +ICVGNVLQ+G+G +S R+ Q++A IP  VP   VNRQCSSGLQAVA++AA I+ G    GIAAGVE+MS NA    G    I+++ V G   AA  LIPMGITSENVA  + V R  QD+FAA SH+ A  AQ  G+F EEI+PV   +KGPDG    VLV  DEGIR  TTA+KL+ L+P FK+GGSTTAGN+SQVSDGAAA LLM+  RA  LG RPLG   SYAVVGVPPE+MG+GPA AIP A+ +AGL   DVDVFE+NEAFASQATYC++ LGL   KVNP GGAIALGHPLGCTG RQVATLL+ +RRTG R+GVVSMCIGTGMGAAAVFEA
Sbjct:    9 EVVVVEAVRTAITRAKKGSFKDSTPDDLLAAVFTAALERSNVDATVVQDICVGNVLQTGSGVVSGRIAQLQANIPPEVPFYVVNRQCSSGLQAVANIAASIRDGEIDCGIAAGVETMSRNAMTQKG--LDINMDKVLGAPRAAACLIPMGITSENVAAAYGVSRRTQDEFAARSHALAAAAQYAGMFREEIVPVEAQIKGPDGTVSKVLVDTDEGIRAETTADKLSALRPAFKEGGSTTAGNASQVSDGAAAVLLMSADRARALGKRPLGKMLSYAVVGVPPEVMGVGPAFAIPEALRRAGLAAGDVDVFEINEAFASQATYCVQHLGLPAEKVNPLGGAIALGHPLGCTGARQVATLLHHLRRTGKRYGVVSMCIGTGMGAAAVFEA 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2147.5653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLM1_9STRA2.880e-16968.46Thiolase, N-terminal domain-containing protein n=1... [more]
D7FX87_ECTSI3.050e-16966.593-ketoacyl-CoA thiolase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0X911_9STRA9.500e-16163.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3G9X7_PHYRM7.580e-15961.86Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]
A0A3M6VJG2_9STRA4.900e-15761.52Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A2D4CB28_PYTIN1.600e-15660.533-ketoacyl-CoA thiolase A n=1 Tax=Pythium insidios... [more]
A0A8K1FFU4_PYTOL8.450e-15661.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI00074FED691.120e-15562.093-ketoacyl-CoA thiolase, peroxisomal n=1 Tax=Gekko... [more]
A0A662X402_9STRA1.580e-15560.88Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A6V1SKD4_HETAK5.140e-15564.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2147contigH-paniculata_contig2147:3841..12636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score501.9
Seed ortholog evalue2.8e-139
Seed eggNOG ortholog2880.D7FX87
Preferred nameACAA1
KEGG rclassRC00004,RC00326,RC00405,RC01702,RC02728
KEGG koko:K02985,ko:K07513
KEGG ReactionR00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R07891,R07895,R07899,R07937,R07953
KEGG Pathwayko00071,ko00280,ko00592,ko01040,ko01100,ko01110,ko01130,ko01212,ko03010,ko03320,ko04146,map00071,map00280,map00592,map01040,map01100,map01110,map01130,map01212,map03010,map03320,map04146
KEGG ModuleM00087,M00113,M00177
Hectar predicted targeting categoryother localisation
GOsGO:0000038,GO:0001676,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003985,GO:0003988,GO:0003997,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006887,GO:0006955,GO:0006996,GO:0007031,GO:0007584,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008410,GO:0008775,GO:0009056,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016192,GO:0016401,GO:0016407,GO:0016408,GO:0016453,GO:0016491,GO:0016627,GO:0016634,GO:0016740,GO:0016746,GO:0016747,GO:0016782,GO:0017144,GO:0019395,GO:0019752,GO:0030141,GO:0030258,GO:0031410,GO:0031667,GO:0031907,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032787,GO:0032940,GO:0033036,GO:0033365,GO:0033540,GO:0033559,GO:0033993,GO:0034440,GO:0034613,GO:0034774,GO:0035580,GO:0036109,GO:0036230,GO:0042119,GO:0042221,GO:0042493,GO:0042579,GO:0042581,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044433,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0046395,GO:0046903,GO:0046907,GO:0048545,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0060205,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:0097708,GO:0099503,GO:1901360,GO:1901363,GO:1901575,GO:1901615
EggNOG free text desc.acetyl-CoA C-acyltransferase activity
EggNOG OGsCOG0183@1,KOG1389@2759
EC2.3.1.16
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Exons7
Model size2004
Cds size1242
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929579.2738907-UTR-H-paniculata_contig2147:3840..40641622929579.2738907-UTR-H-paniculata_contig2147:3840..4064Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2147 3841..4064 +
1691480922.2641194-UTR-H-paniculata_contig2147:3840..40641691480922.2641194-UTR-H-paniculata_contig2147:3840..4064Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2147 3841..4064 +
1622929579.4934895-UTR-H-paniculata_contig2147:12098..126361622929579.4934895-UTR-H-paniculata_contig2147:12098..12636Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2147 12099..12636 +
1691480922.3546584-UTR-H-paniculata_contig2147:12098..126361691480922.3546584-UTR-H-paniculata_contig2147:12098..12636Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2147 12099..12636 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929579.368255-CDS-H-paniculata_contig2147:4064..41871622929579.368255-CDS-H-paniculata_contig2147:4064..4187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 4065..4187 +
1691480922.2770274-CDS-H-paniculata_contig2147:4064..41871691480922.2770274-CDS-H-paniculata_contig2147:4064..4187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 4065..4187 +
1622929579.3964758-CDS-H-paniculata_contig2147:5859..59551622929579.3964758-CDS-H-paniculata_contig2147:5859..5955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 5860..5955 +
1691480922.2871988-CDS-H-paniculata_contig2147:5859..59551691480922.2871988-CDS-H-paniculata_contig2147:5859..5955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 5860..5955 +
1622929579.4123135-CDS-H-paniculata_contig2147:7239..74291622929579.4123135-CDS-H-paniculata_contig2147:7239..7429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 7240..7429 +
1691480922.2969315-CDS-H-paniculata_contig2147:7239..74291691480922.2969315-CDS-H-paniculata_contig2147:7239..7429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 7240..7429 +
1622929579.4269927-CDS-H-paniculata_contig2147:8300..85481622929579.4269927-CDS-H-paniculata_contig2147:8300..8548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 8301..8548 +
1691480922.3069344-CDS-H-paniculata_contig2147:8300..85481691480922.3069344-CDS-H-paniculata_contig2147:8300..8548Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 8301..8548 +
1622929579.4411173-CDS-H-paniculata_contig2147:9587..97371622929579.4411173-CDS-H-paniculata_contig2147:9587..9737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 9588..9737 +
1691480922.3171759-CDS-H-paniculata_contig2147:9587..97371691480922.3171759-CDS-H-paniculata_contig2147:9587..9737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 9588..9737 +
1622929579.462505-CDS-H-paniculata_contig2147:10807..110471622929579.462505-CDS-H-paniculata_contig2147:10807..11047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 10808..11047 +
1691480922.3279884-CDS-H-paniculata_contig2147:10807..110471691480922.3279884-CDS-H-paniculata_contig2147:10807..11047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 10808..11047 +
1622929579.4793174-CDS-H-paniculata_contig2147:11903..120981622929579.4793174-CDS-H-paniculata_contig2147:11903..12098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 11904..12098 +
1691480922.3410032-CDS-H-paniculata_contig2147:11903..120981691480922.3410032-CDS-H-paniculata_contig2147:11903..12098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2147 11904..12098 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2147.5653.1prot_H-paniculata_contig2147.5653.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2147 4065..12098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2147.5653.1

>prot_H-paniculata_contig2147.5653.1 ID=prot_H-paniculata_contig2147.5653.1|Name=mRNA_H-paniculata_contig2147.5653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
MEACKRMDRIGLHLSARGNSASDDDIVVVDAIRTPITRAKKGGFKDTTPD
VLLSEVLSAVLARTGVNPEEVGEICVGNVLQSGAGALSSRVGQVRAGIPH
TVPLSTVNRQCSSGLQAVAHVAAGIQAGHYAVGIAAGVESMSLNAFGGGG
PPAGIDLEFVKGDKDAANVLIPMGITSENVATHFAVGRVEQDKFAAESHS
RAHRAQEEGLFEEEILPVRTSVKGPDGAHHDVLVAKDEGIRPGTTAEKLA
GLKPVFKKGGSTTAGNSSQVSDGAAASLLMTRKRAAELGLRPLGVFRSYA
VVGVPPEIMGIGPAVAIPAAVTKAGLGLKDVDVFELNEAFASQATYCIKE
LGLDPRKVNPKGGAIALGHPLGCTGCRQVATLLYEIRRTGARFGVVSMCI
GTGMGAAAVFEAC*
back to top

mRNA from alignment at H-paniculata_contig2147:3841..12636+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2147.5653.1 ID=mRNA_H-paniculata_contig2147.5653.1|Name=mRNA_H-paniculata_contig2147.5653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8796bp|location=Sequence derived from alignment at H-paniculata_contig2147:3841..12636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCATTATATTGCGGGTCAGATAATATGACATATCCGGTGGTGCATTCGAC CGAGCGCAGGAGCGCACAGGGCGTAGCAGCTACTGTAGTGGTAGCGTTAC TGTACACTTTCCCCTGCGTGACAGGATCGTTTGCTATCAATAGTAGAGGC CGGGTAGAGGGATTAGTCTTCAGCTAATTAAGAGATCATAGCAGAGCTAA CCTGTGGTATAGCAGCATTATCTAATGGAGGCATGTAAGAGAATGGATCG GATTGGGTTGCACTTATCCGCGCGAGGCAACAGCGCTAGCGATGACGACA TCGTGGTCGTGGATGCTATCCGCACCCCCATTACTCGCGCGAAGAAGGTA CGTTTACGGGCGTGGTTCACACATGTATATACGGCATATCATAGTTTGCA TTTGTTGTCGCGTTGTTGTTCTTTTCTGTCTGGCTGCAACGAGGTTGTTG TGGTGCATGTGGTGCTTGTGTGCAATATCTGTCTGACTGTATGTATCTTA TATCTGTGTACTAGTAGTATATGTTTGTGTACTAGTGGTATATGTTTGTG TACTAGTGTTCTGTTGTTACTAGTGTATGTCTGTGTACTACTGTATACTA TTCGTATCGTATGTATGCATGGGAGCGACAAACGGTCAGAAATGGTCGGT AATGATCTGGGCGTGTCAACTTGTCGCCGCTCTAGTATGTAGATTATTCA GCTATACTGCAGAGTCTGTATGTATTACAAATAACATACAGTAGTGCACG GCTGCTTCTACCGAGTCCCAGCTCATACCCTCTCGGTGCATCGATTGATC GTTAGGAGTCACGTAGCTCTCCGCAGTATGTAGGTACAGACAGTCAGAGT TGTATAGTGAGCACGGCGGCCTGCTGGACTTGACTCAGTCATGAGCAACC GCTCCTTCTCTGCCACCACTTGAATTGCGTATGGGACTAACTTGTATGTT GACCTAGAAGAGATGCGAGCACGTAGATTATACATGTTTTGTGTAAAATA TATATTATAGCCGGAGAATATATCCGAACATGATGTAGAAGGACCCGCGG TTCCCCCGCCTTAACAGATAAGTCTCCTCCCTCTATCGTGTACTGTACAA CTGTGCCTGTTTCGCATTGCCGTACGGACAGAAAAATTGGCCAAGGTACG CATGCATAACGACCGTAGGCTATATTTTGAAAATAAGTAATATGAACACC AACCGTTCACTTCACGTCTGATGGATCAGACCTGCCGGTTAACCGTCAAG CTTTTAAAGCCTTGTCTATCCGGCTGGTAGTAGAGCTCCCATGAAATTTT ACACAACACTAAATTCGTTATTGATGGGTATCAACTCTTACCATAACGCA TATTTATATTTGTCGAGAAAAAGCGTCCGGTTTAATCGCCTAGGCGACCG TGATCTCGCTAAGCAAATCGCCCGCGTCAAGGAACGCGCAGCAAAACCCT AAACCCTGCCAAACCAATAAAAACGCCTTTCGAAGTTTTCGGGCGGTACT ACTACACCAATGTGGCGTTTTTTTACGTACACGAAGTGAGCTTCCATTGC ATGTTGTCGTGATCCCATCCTCCCCTGCTGCAGCGAAGTGTCGATTACCT TACTGTACTGTACTGAACTTTTGTTCGTGTTTTTCAGCTCACTTTTCCAC CGGTTCTCCGTTTGTTCGTGTTACTCAGAACTTAACCCAACCTTGTCTTG GGGGGAAATCATACTACGACAGGCTAACCCTAAGCCCCTATCTGATTGAC AATTAATAATTGCCTATTATAGCGAAGGCGCGACTTGGTCATGATCCATG ACCGGTTCATGTCTATCTTACATGTTTTTTTTTATCTTTTTTCTTGATTT ACTATTCACACACTGATACTGTACTACTACTCCAGTGGTGAACATACAAC AAGAGCAGCGGCGAGTTAGAAAGATGTTTAACCTAGGCAACCGTGACTCC ACACCTTGTCTTGCCTCTAATCCCTCAGCATAACCTTAACCTCCAATCCT AACGATTTGATGACAACAGGGTGGATTTAAGGACACAACGCCAGACGTCC TCCTGTCGGAGGTCCTAAGCGCGGTTTTGGCTCGCACCGGTGTAAACCCG GAAGAGGTCGGAGAGGTGAGTCTGGAACAGTTGTCCTTGTCCAGTGCTCG CAGTATTGCGACGAGTATGGTGTTCGGGGGTCAGTTTCTTCTTATTGTTG TTTCTCTTGTGCTTTTTGTTTGTTTTTGTTCCTCTGTCCGAAGATGTGTG GGTGGAGGCATGCTATGTTGTTTTTGGAGGAGAGAGGGTTTTGCTCTGCA GTGTCCCAACTCATTTCACGTACGGGTATCGGTGAGGAGTGTGCTGTGCC CTCATCGCCAAGAGGCTTTGTGTTTGTATTACATTGTTGCTGTTGTTGGT CGTTTTTGCACGGTCTAGTTTTGTGAGAAGTTGTACGGCCTCCTGACCAC GGGTCGGAATGACGGCACTGTTTATTCCTCATCATATGTGTTCGACCAAA AAACAATTAACGTAGATACGGTCCGTGTAGGCAGGTCCTCATTAGTTACT AGCTTGCCTTCAGTACTTACCAGCCTGTCGGCATTATTCGAAATAGCAAC TACTTGAACGCTTTCGTCAAGGTAGGTCATTCGTTTCGCTTCTTTGTCGT TCGTTCTTCGCGCACGCACCGGAGGTGGAGCTGGCCGCCCTAGATATACC TTCCTCCGTGGTTATCGGAACACGCAGGGATTCGTGACATTACTGCAGGA AAATCGACTTACTGCAGGAAATTGCTGCCTCCTGTTGTGTTGTTACTTGA CGCACACACACATACACACACAGACACACACATGTCAAGGTGGGCTTATG GTCACTGTCAGCTAGCTATCTGGGTGTCAACTTCGCTATCGACACCCCCC ACCTCGCTCCTCCCCCCTCCGTCTTGCGCACGCAAACACAAACCGAACCG AATAAAAAACGAAATAGAAAACAGCAACAACAAGTCTACACACCTCAGAT GAAGGTCTGTAAAGTTTGTCGTGGATTTTGGAATCATGAAAGCACGAGGC CCCTTGGCGCCCTCCCGAAGTGCGTCGAATCGATAGGGTGAAGGGAGGGA AAGAGGAAGGAAGGAAGGTCCTTCCTTGACACCTTCGTGAAGTCTTCGAT TTCGGAGTACGAGCGTGCCTCCGTAAGTTGTTGTACTTTTAAGCGTGAAG TCTAGCTAACGGTTGTTGACGTTTTATGAAGGGTGTTTTTACTTGAAAAT GAATCTGCATACAAGCTTTGAAATATATATTTAAAAAAAACGCAATGATC GCATGACACATATCACGTCCATATTTTGCCGCCGTCGTTGTCATCGTCGT TGACACCGACCATACGATACCGTACATCTGTGCTTACTACCACCCCCAGA TCTGCGTTGGCAATGTGCTGCAGTCGGGAGCCGGAGCCCTCTCGAGTCGG GTGGGCCAGGTTCGCGCTGGCATCCCTCACACAGTACCGCTGAGCACCGT CAACCGACAATGCTCCAGCGGCTTGCAGGCCGTGGCACACGTGGCCGCGG GAATCCAGGCGGGGCACTATGCTGTCGGGATTGCGGCTGGTAAGGAGGAC GGGGGAGGTCGGGCGAGTGGGGGGATCTGACTTTGTTCTGCTAGAGTGTA CATGTGTACATGTTGGACTTGTTTAGTCTATCTTCTTCATCACCCCAAAG TTTTTAATACCGTCATTAGGAGTAGTCATGCGCGATTAGTTGAGCGTGCG CGGCTACTTTGTTGTTCTTTGAGACTGTAACACTTGGGATCTACGACCGT TAAATTCCTTTATGCTACGATGTCATTCCCATGTGAAAATTCAGCGCACA TAACACCCCCCCCTCCCTCATCCCTTCACCCAGCGCTTGGTCCTCTTTTT CAGCACATTTGATGCAGGCGCCAAAACAGCGTGCCGTACTGCAAACGTAC TACAGTACCACAGCAAATCTAAATACACATGGGCCTCTGCAGATAGATCT TCACGACTCCCCCCCCCCCGCGGGCGCTGGCCTGCAAAAAACGCCAACGG AATAAAAACACGGAAGGCTTGGCGGTGTGGATGAGGCTTGCTGGCACACC TTTTCAAGTTCTCGACTTCTTCCCGTACTAACCAAGATAGAAGTGTCAAA AGTCAAAACGAACCACGACCTGGTGGGGGTTGGGGTCTATTAGCCTTCTA AACTTGAAACAAAAGCCCAACCAACAGATAACAGATTACCATAACACTTC TAATAATGGTTATCACACATGCGGCCAAGGATGAATTTTATTTAATGGGC TCGGGTATTAAATAGCGGGTGTGGCAATTTCAATGGACGTGCCTTAACTA CCTTTTTTCTCCCCCCATTCACAAACATCGAAACAAACGGGGGGGGGGAG AATGACCAGTACAAAATAATTACAGCACATCACAAAACAATACATCTCAA TTCAATAAAGGTGTGGAGTCGATGAGCCTTAATGCCTTCGGCGGGGGCGG GCCTCCGGCGGGCATCGACCTCGAGTTCGTGAAGGGTGACAAGGATGCCG CTAACGTGCTGATACCAATGGGGATTACGTCCGAAAACGTGGCGACGCAC TTTGCGGTTGGACGTGTGGAGCAAGACAAGTTCGCCGCTGAGAGCCACTC GAGGGCCCACCGCGCACAGGAGGAAGGGCTGTTCGAGGAGGAGATTTTGC CTGTCCGGGTGGGTGGGTTTGGCTATATATATATATAAGTAGGGTAGGTA TACTTAAGGTAGGTGTAAGTGGGTGCGCGGGTGGGTGGGTGAATGATTAC TTTCACCGTGTACCTCACCATTAGACCTATACTTTTATATTTATATGTAT GCATGTGACAGACGCTTTAATTCATGTGAAGATTTTTGAAAGCATGATCT TTCTAGCCGTCGTTGAGACCGTTACATTTGATAGGTAGGTAGGTAGGGAG GGAGGTGAATGGGTGAGTGAGTGGGTGGGCAAAGGCTTTTGTCTGTGCAT AGATCTAGGTTTTTTGTAACGATTGATGTTGTATCATTCGCTCAGGTGTT TTGTTGTGGTGGTAGTCGTCGTCGGTTCAGAACAATTTTTCAACCCTGTA CTCGAATAAGTGTACGAAAACTGTGAGCCTTGACGGACATTTGTGCCTAG GTTAATTTTTACTTTGTTTTGCAAGCGTGAAGTGTAGCTTACCACTCACT GCAAGGGCAGCAGGGCGTTTGTGGGTGGCACGAGGAAAAAATACGAACCG CTACGCGTATGTAGCCGTGGTTGTCCTATAGTTGTAGTTGAATTCTTGCA CCGTTCGCTGAATTTGTGCATGTTCTGCGCAATTGATGAAAACCGAGCAC ACGCTTTACTCTTCTTTTCTTCCTCTGAGAATGCCCCCTCCCCCCCCTTT CCCTTGTTTCTATATACTGGCACTGGTGACGAGAGTACATATAATGCGCG CAGCTCTGAGATGTAACCTGCAAACCTCGGCATGATGGAAAAATATACAC ATACCGTACAGAGCTACATAGCAAATTATATTATGTTGAAATGATCAACA TCCAAGTAAAAATCAAGCAGTGTGACGGGGAGTCTACCTGTATAATCTCC ATTTTTTCGCTTTGTACAAGTGTAGATGGGCTGACCCCCTCTCCCTTCAC ACACCTCGCTCTCAGCAACGTTAATTCGTAGTGCCCATCCACATTGTCTC GTATCTCACCGCTTTTATAGTCCCGCATCTCCCCGCTACGTTTCCAGACA TCAGTCAAGGGCCCCGACGGCGCACATCACGACGTGCTGGTGGCGAAAGA CGAAGGTATCCGACCCGGAACCACGGCGGAAAAGCTGGCCGGGCTTAAGC CTGTCTTCAAGAAGGGAGGGTCCACGACCGCTGGAAATTCTAGCCAGGCA AGGAGAGACAGAGACAAAGGCAGGGTAGAGACAGTGACAGAGACAGAAAC AGAGACAGACAAAGAGAGACAGAGACAGACAGAGACGGGCAGAGATAGAC AAGGGCAAATAAACAAGCGGTGCATGTGGGGGTGCGGATGCGGATGCGGA TGCGGATGCGGATTGATTTTGACAGTATCTGTAGGCGACAAGGGGGGGTC GTTTTTTATTTTTTGGTGGTTGTGATGCCGCATTAAACACGCTCATGTTT GCGTACGTTCGGAGGGTGAGCGATAGTTTGCTGCGAATACATGGGTTAAT GTGATAGCTATGCAGCAGAGATAAACACGAATTGCGTCATCAACGGCAAG ACACTCTCAGGTACTTGGCTTACCATCTGCCAAAACTGTGGCGGCCGTCG CTTCTGAATACTGTGTCTCCTCATGTCTTCTCTGTTGGTTAGGGTTGATT GGGTGACTCATTCAACGACGTAGTTAATATTTTTACCTTTAGACGCCTCA AAACGTTCGTCGACAGCAGTACTGCATACGAGGTATCAGCTCTGTGCTTC TGCTTGCGCCACCCAAATCTCAACCAGAAATGTTTTATACTTGGTACTTC CTATATACTCCCCCTCCCCCCTATATGCACATGATATGGGGATAGGGAGC CGCTCGGTTCAGACTGTCACTTCTGTACCGACAGTACACATGGCACGGAG ACAGGACGTTGAGATGATTCTGTGCACAAGGACATCTACAGTGCTTAAAA CACATTATCAGATGAATATTTTTTTCCCTCAATGAGAGTCTGGCCCCATG TCTCCACTTCATCCGGTCCTTAATGTTTGCGATCATCTTCTACCAAACAA CCAGCGACAAACAGGCTGCGTCGGAGACTTGCAAACTTGCCCCCCCCCCT CCCTCGACCCACGGCTTCTTTTACGGTTGCTGATGCTGGTTGTGTGCGGC TCGATAGATTGGCGGGCAAATGAGCCGTTTGTTGAAGGGTTGTTCATTTT CGCTTTTTGGACCTCTTGTTCCACCCCCGTCCCCCGCCCGCGTCGCTTTT CCGCCCATGTTACCCAGGTAAGCGACGGAGCGGCGGCCAGCCTGCTCATG ACGCGCAAGAGGGCGGCGGAGCTTGGTCTCCGTCCGCTGGGAGTGTTCAG GTCTTACGCCGTGGTCGGGGTGCCGCCGGAGATCATGGGCATCGGTCCCG CGGTGGCCATCCCGGCGGCGGTAACCAAGGCTGGTTTGGGCCTGAAGGAT GTGGATGTTTTCGAGTTAAACGAGGCGTTTGCGAGCCAGGCAACGTACTG TATTAAGGTAAGGAAGAGGTTGTGTGTTGCTGATGTTTATGCGGTGGATG TGTCACTCACGCTTTGCTGGTGATTGGGATTTAAAATAAACTATGCTGTT CAATGTTCTCCCCCCCCTCGAGAAGAAAAGAGTCTCCTCGTTTGTTCCGT TGAAAAACTATTTTTTTATCTATTGGCCAGATGTAAGTGTTGACGACGAT CTTTCGTTCCGGTGACGCAGCTTTCAGTTGTCGGCGTCGCAAGCCAGCAC CGTAGTTTTGGAGGGAAATTAATTTTGAAAAAATGTTCGTGTGTCAATTA TCACCGGCGGTGATTTCACGTTGTAAAATGTTTAGGACGAAGGTTATCAA GTGAGTGTGTGTGTGGGGGGGGAGGGGGGCATGTAGGATTGAGGTTTGTT GGTAGGAAGTTGCGCTGTTTTTTTTTCTTTTAAGATTCAAGAGTTTTTTC GGCTGCTGTAAGGATAGGATAGATAGTGTGCCGTGTTACGTTTCTTGGGA GGTTGTGGGAGGTGCCAATCCAATCCTCTCGGGACCGGACCTCGTAATAA TCAACATAAGGATTGCGCGTTACTGTTCAGATTTGATTGATAAAAAAAGA AAGCAGAGCCCTCAAGAAACAAAAGTTCTTCTTTTTCTGAACTTGTGCGT GCGTGTTTTGTTCCTATGATTCCCCCCTTCCCCAAGTCTGTGCATGTACC CACCTTTATCTCGAGTGTTTTGTAAACCTTTATACCTCGCCCGCCTCGCC CCTTCCCCCCTCCATACCCTGGTATCCTTTTGTTCGTCTCTACATTTTAA TGTCGGGGGCCACCATTTTCATTATTTTCCTTTTTTGTTTGGCAAAATAT TTGGCAAAACCAGGAACTCGGGCTGGATCCACGCAAGGTCAATCCAAAGG GCGGGGCAATCGCACTTGGGCATCCATTAGGGTGCACGGGGTGCCGACAG GTAGCAACGCTATTGTATGAAATAAGGAGGACGGGCGCGCGCTTCGGGGT AGTGTCGATGTGCATTGGAACGGGCATGGGGGCCGCTGCGGTGTTCGAGG CGTGCTGAGATTCAATTCTTTTGTCTCTTTTTCAAATAATTGGATCGTCT TCTATTGGATATTTTCCCTTTTTTTATTATTTCTAATACTTCGATCGTTT TTTCTCTAAACTTGGAACGTGTTTCCGTGGGTTTTAAGTCTGTCTGTCTG TCTTTTTTTTTTCTTGTTTTTTCTTGTTTTTCCCCCTGTTTTTCTTCGTT TTTCTATTGATCGAGGTTTATGTTCCGTGTCTTGCGCGTGTATCACATGA TACGCTAGTCAACTCGCCGCCGTCGTGTTTTGCATGTTCTTCGGTCGTGT CTTACCGGCAAAAAGTAATGGGTCACTGAATTGGGAGAAGCGTTGATTCG TTTTGCCGCCTTGGGAGCGGTATATATTGTTTTACCGTTGATGTGTGCAA TTAGTTGCCCCACCGTGTTGTAGGGGGGGTGAAACGGAGCGAGGCCAAGT GTCTACTTTTCCTATCGCATCATGAAAAAATCAAAGAACGTTGACAATTT GATGTCCGAATTAAAAAATTATATTTAAAAAAACTGGGTCAAGCTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2147:3841..12636+

>mRNA_H-paniculata_contig2147.5653.1 ID=mRNA_H-paniculata_contig2147.5653.1|Name=mRNA_H-paniculata_contig2147.5653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2484bp|location=Sequence derived from alignment at H-paniculata_contig2147:3841..12636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCATGTAAGAGAATGGATCGGATTGGGTTGCACTTATCCGCGCG
AGGCAACAGCGCTAGCGATGACGACATCGTGGTCGTGGATGCTATCCGCA
CCCCCATTACTCGCGCGAAGAAGATGGAGGCATGTAAGAGAATGGATCGG
ATTGGGTTGCACTTATCCGCGCGAGGCAACAGCGCTAGCGATGACGACAT
CGTGGTCGTGGATGCTATCCGCACCCCCATTACTCGCGCGAAGAAGGGTG
GATTTAAGGACACAACGCCAGACGTCCTCCTGTCGGAGGTCCTAAGCGCG
GTTTTGGCTCGCACCGGTGTAAACCCGGAAGAGGTCGGAGAGGGTGGATT
TAAGGACACAACGCCAGACGTCCTCCTGTCGGAGGTCCTAAGCGCGGTTT
TGGCTCGCACCGGTGTAAACCCGGAAGAGGTCGGAGAGATCTGCGTTGGC
AATGTGCTGCAGTCGGGAGCCGGAGCCCTCTCGAGTCGGGTGGGCCAGGT
TCGCGCTGGCATCCCTCACACAGTACCGCTGAGCACCGTCAACCGACAAT
GCTCCAGCGGCTTGCAGGCCGTGGCACACGTGGCCGCGGGAATCCAGGCG
GGGCACTATGCTGTCGGGATTGCGGCTGATCTGCGTTGGCAATGTGCTGC
AGTCGGGAGCCGGAGCCCTCTCGAGTCGGGTGGGCCAGGTTCGCGCTGGC
ATCCCTCACACAGTACCGCTGAGCACCGTCAACCGACAATGCTCCAGCGG
CTTGCAGGCCGTGGCACACGTGGCCGCGGGAATCCAGGCGGGGCACTATG
CTGTCGGGATTGCGGCTGGTGTGGAGTCGATGAGCCTTAATGCCTTCGGC
GGGGGCGGGCCTCCGGCGGGCATCGACCTCGAGTTCGTGAAGGGTGACAA
GGATGCCGCTAACGTGCTGATACCAATGGGGATTACGTCCGAAAACGTGG
CGACGCACTTTGCGGTTGGACGTGTGGAGCAAGACAAGTTCGCCGCTGAG
AGCCACTCGAGGGCCCACCGCGCACAGGAGGAAGGGCTGTTCGAGGAGGA
GATTTTGCCTGTCCGGGTGTGGAGTCGATGAGCCTTAATGCCTTCGGCGG
GGGCGGGCCTCCGGCGGGCATCGACCTCGAGTTCGTGAAGGGTGACAAGG
ATGCCGCTAACGTGCTGATACCAATGGGGATTACGTCCGAAAACGTGGCG
ACGCACTTTGCGGTTGGACGTGTGGAGCAAGACAAGTTCGCCGCTGAGAG
CCACTCGAGGGCCCACCGCGCACAGGAGGAAGGGCTGTTCGAGGAGGAGA
TTTTGCCTGTCCGGACATCAGTCAAGGGCCCCGACGGCGCACATCACGAC
GTGCTGGTGGCGAAAGACGAAGGTATCCGACCCGGAACCACGGCGGAAAA
GCTGGCCGGGCTTAAGCCTGTCTTCAAGAAGGGAGGGTCCACGACCGCTG
GAAATTCTAGCCAGACATCAGTCAAGGGCCCCGACGGCGCACATCACGAC
GTGCTGGTGGCGAAAGACGAAGGTATCCGACCCGGAACCACGGCGGAAAA
GCTGGCCGGGCTTAAGCCTGTCTTCAAGAAGGGAGGGTCCACGACCGCTG
GAAATTCTAGCCAGGTAAGCGACGGAGCGGCGGCCAGCCTGCTCATGACG
CGCAAGAGGGCGGCGGAGCTTGGTCTCCGTCCGCTGGGAGTGTTCAGGTC
TTACGCCGTGGTCGGGGTGCCGCCGGAGATCATGGGCATCGGTCCCGCGG
TGGCCATCCCGGCGGCGGTAACCAAGGCTGGTTTGGGCCTGAAGGATGTG
GATGTTTTCGAGTTAAACGAGGCGTTTGCGAGCCAGGCAACGTACTGTAT
TAAGGTAAGCGACGGAGCGGCGGCCAGCCTGCTCATGACGCGCAAGAGGG
CGGCGGAGCTTGGTCTCCGTCCGCTGGGAGTGTTCAGGTCTTACGCCGTG
GTCGGGGTGCCGCCGGAGATCATGGGCATCGGTCCCGCGGTGGCCATCCC
GGCGGCGGTAACCAAGGCTGGTTTGGGCCTGAAGGATGTGGATGTTTTCG
AGTTAAACGAGGCGTTTGCGAGCCAGGCAACGTACTGTATTAAGGAACTC
GGGCTGGATCCACGCAAGGTCAATCCAAAGGGCGGGGCAATCGCACTTGG
GCATCCATTAGGGTGCACGGGGTGCCGACAGGTAGCAACGCTATTGTATG
AAATAAGGAGGACGGGCGCGCGCTTCGGGGTAGTGTCGATGTGCATTGGA
ACGGGCATGGGGGCCGCTGCGGTGTTCGAGGCGTGCTGAGAACTCGGGCT
GGATCCACGCAAGGTCAATCCAAAGGGCGGGGCAATCGCACTTGGGCATC
CATTAGGGTGCACGGGGTGCCGACAGGTAGCAACGCTATTGTATGAAATA
AGGAGGACGGGCGCGCGCTTCGGGGTAGTGTCGATGTGCATTGGAACGGG
CATGGGGGCCGCTGCGGTGTTCGAGGCGTGCTGA
back to top