mRNA_H-paniculata_contig2146.5647.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE) HSP 1 Score: 333 bits (853), Expect = 1.280e-100 Identity = 260/615 (42.28%), Postives = 312/615 (50.73%), Query Frame = 1
Query: 211 VTLVHLLAHPSPGGRDRSMMGSIAGIVTSWWNGTTSSAPVGSTHHIHE---LESKAREREEAGDLEDAMELLLEMHEASHTSEAVRLAHELAVRHP-DVFEAKGCP---------VRGGNQHTA---PAAVXXXXXXXXXXXXXXXDERVP-------SLVSRLVAE---------PTEASPAMGAAASPNDETSVDCEPALASSGTVDAQKSGTPSANVRKQG----HGHCET------PWERGWQGPRDFKPPSPYSRSPVVGSSHGAESSS--------IRPAS-------------LDL-----SRSCLRNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLEDLERFERMTIDGWENTFIARGYPLVGRVITPPAPRRMVREELRPFDGR----------------GLG--------------------------EGALPE-------------GYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVGWIDLDS 1686
V L LL P+ G S+ + +S T S+ STH LE +A E E AGDL+ AME LL H+ +S AV LAHEL+ RHP CP V GG + A P A XXXXXXXXXXX P SL S ++A+ P E + ++ E A A++ +Q + T + + G HG E PWERGWQG FKPP S GSS +++ + P+S LD+ ++ RNFT+ QLN FDGG AP + A K RPIYI+++G VYDASAGR LYG GG+Y EFAGHDI+RR A G ++ + + LDDLSLE+L RFE+MT+ GWE+TF ARGYP +GRV+ PP PR R ELR FDGR G G E PE Y PIYMGVKD+VFDVSFGGSEFY GG YECLAG+DASRVLAKMSM ED+EGVLDYS LTDRE KN+ DWV KLGEGGKGYPVVGWIDL S
Sbjct: 21 VILAVLLMLPARWGAGSSIRKASRAPGSSSSRRTGSTGTSTSTHGCSTAAALEKRAEELEAAGDLDGAMEALLASHDQG-SSRAVTLAHELSQRHPVGALGGNRCPLSIRSPRRKVGGGVEAGASPDPEASSAXXXXXXXXXXXAVSVVAPVCAAALTSLASEVLADDNNDGVTSVPEEHCKRSLPSGEERRHVTLSGESASATAAGPASQSAATTATGALEPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALADTGSSASRDAAGTAAAFGAGLSPSSSSFAETGVQSDDALDVGDAEATKLARRNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASHSDRSSNT-----LLDDLSLENLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRSAHVAGPEYEETERRAGAGREEREVGGGEPGEQVAALGRHEEQPAESLPPEQEAKATANAVCFSNYAARPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVAKLGEGGKGYPVVGWIDLGS 629
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI) HSP 1 Score: 285 bits (729), Expect = 2.490e-82 Identity = 158/292 (54.11%), Postives = 178/292 (60.96%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLEDLERFERMTIDGWENTFIARGYPLVGRVITPPAPRRMVREELRPFDGR--------------GLGEG---------------------------ALP--------------EGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGY 1656
RNFT+ QLN FDGG AP + A K RPIYI+++G VYDASAGR LYG GG+Y EFAGHDI+RR A G ++ + LDDLSLE L RFE+MT+ GWE+TF ARGYP +GRV+ PP PR R ELR FDGR G G G +LP Y PIYMGVKD+VFDVSFGGSEFY GG YECLAG+DASRVLAKMSM ED+EGVLDYS LTDRE KN+ DWVEKLGEGGKGY
Sbjct: 34 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSST-----LLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGY 320
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV) HSP 1 Score: 166 bits (420), Expect = 4.400e-43 Identity = 102/248 (41.13%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 943 LRNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDES-LDDLSLEDLERFERMTIDGW-ENTFIARGYPLVGRVIT----PPAPRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVG 1668
L NFT QL FDGG+ + K + + +P+Y+S++G VYDAS GR LYG GG + +AG + A+G D+S LD++S +DL E+ ++GW E + YP++GR+I P R + +EEL +DG+ +PEGY PIY+ K +V+D+SFGG FY GGAY C AG+DASR LAKMS++ D E S L+++E K ++DWV K E K YP VG
Sbjct: 16 LNNFTSVQLLHFDGGEDSVGKKKGE------KPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARG-----------SLDQSDLDNISCDDLSMNEQTELEGWVERLKSSLCYPVLGRLIPGDALPSEDRVVSKEELAQYDGKIQD---IPEGYAAAPIYLAAKGKVYDMSFGGVSFYGKGGAYNCFAGKDASRALAKMSLDPADTENT-STSDLSEKEIKVLNDWV-KTFEERKKYPCVG 241
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK) HSP 1 Score: 167 bits (422), Expect = 6.780e-43 Identity = 103/248 (41.53%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLEDLERF---ERMTIDGWENTFIA-RGYPLVGRVITPPAPRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVGWID 1677
RNFT QL +DG + + PIY+++RG V+D S+ YG G Y FAGHD TR AK ++E DDL+ E F E ++DGW TF + YP+VGRV+ PP PR++ REEL+ G+ PEGY T PI + VK V+DVSFGG FY G AY AG+DASR LAKMS + EDV + L+++E K +DDW E + K YP++G+ D
Sbjct: 65 RNFTFEQLKKYDGSE-------------EDEPIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAK-----------MSFEE--DDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPRKISREELQEMRGKQT----CPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNST-ELKDLSEKELKVLDDW-ENTFKNRKKYPIIGFYD 280
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A7S4NEZ3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ3_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.220e-42 Identity = 101/247 (40.89%), Postives = 135/247 (54.66%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDES-LDDLSLEDLERFERMTIDGWENTF-IARGYPLVGRVIT----PPAPRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVG 1668
RNFT QL FDG + D + +P+Y++++G V+D S+GRD YG GG Y F+GH+ AK +DE +DD S E L E+ +DGW F R YP+ GR++ PP+ + + EEL DG +PEGY PIY+ +VFDVSFGG FY GAY AG DASR LAKMS + D+E + LT++E+K +DDW++ GE K YPVVG
Sbjct: 56 RNFTAMQLKHFDGTK--------DEKTGEDKPVYLAVKGIVFDVSSGRDFYGPGGAYEMFSGHECGVALAK-----------MSFDEKYIDDFSWESLNFGEKTELDGWIEKFQYYRSYPVKGRLVPEKSIPPSDKTVSTEELAKNDG----SMEIPEGYAAAPIYVAAGGKVFDVSFGGVTFYGKDGAYSSFAGVDASRALAKMSFDPSDIENPT-INDLTEKEKKCLDDWIKTFGER-KQYPVVG 277
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A7S0CLZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLZ8_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.500e-40 Identity = 104/247 (42.11%), Postives = 139/247 (56.28%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLS-LEDLERFERMTIDGWENTFIA-RGYPLVGRVIT----PPAPRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVG 1668
RN+T AQL F+G GR++ + +Y+S+ G V+D + G++ YG GG Y FAGH+ AK + +N H LDD+ E L E+ + GW F R YP+ G +I P+ R + +EE+ DG G +PEGY PIY+GV +RVFDVSFGG EFY GGAYE AG+DASR LAKMS + D D S L+++E K ++DWV+ E KGYPVVG
Sbjct: 63 RNYTEAQLLKFNGS--IDKTGRFEVTQQ----VYLSLNGTVFDVTEGKNFYGPGGPYELFAGHECGVAFAK---MSFDNDH-------LDDMDGCEKLTNSEKHELIGWMEKFTYYRAYPVKGSLIPNNKLSPSDRILSKEEIAKHDGNGT----VPEGYAVAPIYIGVGERVFDVSFGGVEFYGKGGAYERFAGKDASRALAKMSFDPADTANT-DTSDLSEKELKVLNDWVKTFDER-KGYPVVG 287
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A6T6I1N8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6I1N8_9STRA) HSP 1 Score: 159 bits (401), Expect = 6.610e-40 Identity = 100/253 (39.53%), Postives = 132/253 (52.17%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLEDLERF------ERMTIDGWENTFIA-RGYPLVGRVITPPA-----PRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVG 1668
RNFT AQL FDG D +P+P+Y+S+ G V+D S GR+ YG GG Y FAGH+ AK SLD L+DLE E+ ++ W F RGYP+ GR++ R++ + ++ F+GRG +PEGYGT PIY+G +V+DVSFGG FY G Y AG DASR LAKMS + ED + L D+E+K + DW+ K E K YP+VG
Sbjct: 65 RNFTFAQLKEFDGTN--------DEKTGEPKPVYLSLDGAVFDVSGGRNFYGPGGPYENFAGHECGVALAK---------------MSLDTEHLDDLEGCSKLNFGEKTELESWVQKFTYFRGYPVKGRLVPDTVLDKLKDRKLTKADIASFNGRG---DEVPEGYGTAPIYLGASGKVYDVSFGGMTFYGKDGGYNRFAGLDASRALAKMSFDPEDAASS-NVDDLDDKEKKVLADWI-KTFEQRKKYPIVG 289
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: D7FY31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY31_ECTSI) HSP 1 Score: 152 bits (385), Expect = 6.110e-38 Identity = 99/249 (39.76%), Postives = 131/249 (52.61%), Query Frame = 1
Query: 946 RNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLE----DLERFERMTIDGWENTFIARG-YPLVGRVITPPA-PRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVGWI 1674
RNFTI QL+ FDG A P Y+++RG V+D S+ + Y GG Y FAGHD + A G SLD LE +L E ++DGW + YP+VG+V+TPPA PR EELRPFDG +PEGY PIY+GV+ +V+D+S+GG+E Y G +Y AG+DAS LAKMS E ++ D S L+ + + DW K+ K YPV+G I
Sbjct: 56 RNFTIEQLHEFDGRDEAT-------------PAYVALRGEVFDVSSKPEHYKVGGGYHLFAGHDASYSLATG---------------SLDPADLEKSWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPREFSLEELRPFDGTS----DIPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNP-DMSTLSKEDMTVLQDWASKME---KKYPVIGTI 268
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A836CD55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD55_9STRA) HSP 1 Score: 144 bits (364), Expect = 7.100e-36 Identity = 82/214 (38.32%), Postives = 120/214 (56.07%), Query Frame = 1
Query: 1033 PRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDESLDDLSLEDLERFERMTIDGWENTFIARGYPLVGRVITPPAPRRMVREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEGVLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVGWI 1674
P + + ++G V+D S+ +YG GG+Y HD + A G C D +DLS L ++ T+ GW A+G ++GR++ P P+ R ELR F+GR + +P GY P+YM VFDVSFGG + Y G Y CL G DAS VLA+MSM + D++G LD + L+++E++N+ W KL + KGYPVVG++
Sbjct: 6 PTLLCLCMQGYVFDVSSDPGVYGEGGRYHFLTRHDASYCLA--------TGSCDAADLDREDLSC--LTPQQQRTLSGWVEMLQAKGCAVLGRLVRTPPPKPFQRHELRHFNGR---QSQVPAGYAIPPMYMACNGVVFDVSFGGLDMYDVGCPYACLVGNDASCVLARMSMTQADIDGTLDMANLSEKEQRNLTAWEAKLRQ--KGYPVVGYM 204
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA) HSP 1 Score: 144 bits (363), Expect = 8.240e-35 Identity = 96/249 (38.55%), Postives = 132/249 (53.01%), Query Frame = 1
Query: 943 LRNFTIAQLNTFDGGQPAPNKGRWDTIARKPRPIYISIRGNVYDASAGRDLYGSGGKYCEFAGHDITRRAAKGLGTAENNGHCHGYDES-LDDLSLEDLERFERMTIDGWENTFIA-RGYPLVGRVITPPAPRRM---VREELRPFDGRGLGEGALPEGYGTVPIYMGVKDRVFDVSFGGSEFYTNGGAYECLAGQDASRVLAKMSMEREDVEG--VLDYSVLTDRERKNIDDWVEKLGEGGKGYPVVG 1668
LRNFT+ QL F G KG D PIY+++RG V+D S R YG G Y FAGHD + A+ H D S L+ ++ E+L ER T+DGW F +GYP+VGRV+T P P + +E+L G GEG +P+G P+ + V +VFDVS+GG+ Y G Y G+DASR LAKMS + E+++ + D S+ E ++DW + + KGY VVG
Sbjct: 60 LRNFTLEQLKAFTGVNA---KGEDDEDV----PIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLAR-----------HSLDASDLNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLPDPLPVYTKEQL----AAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLA---EVGVMNDWAARFEK--KGYRVVG 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2146.5647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2146.5647.1 >prot_H-paniculata_contig2146.5647.1 ID=prot_H-paniculata_contig2146.5647.1|Name=mRNA_H-paniculata_contig2146.5647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=476bp MMGSIAGIVTSWWNGTTSSAPVGSTHHIHELESKAREREEAGDLEDAMELback to top mRNA from alignment at H-paniculata_contig2146:3884..7311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2146.5647.1 ID=mRNA_H-paniculata_contig2146.5647.1|Name=mRNA_H-paniculata_contig2146.5647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3428bp|location=Sequence derived from alignment at H-paniculata_contig2146:3884..7311+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2146:3884..7311+ >mRNA_H-paniculata_contig2146.5647.1 ID=mRNA_H-paniculata_contig2146.5647.1|Name=mRNA_H-paniculata_contig2146.5647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2856bp|location=Sequence derived from alignment at H-paniculata_contig2146:3884..7311+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |