mRNA_H-paniculata_contig2140.5630.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A6H5K110_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K110_9PHAE) HSP 1 Score: 516 bits (1328), Expect = 1.090e-170 Identity = 310/446 (69.51%), Postives = 357/446 (80.04%), Query Frame = 1
Query: 298 PPRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTE-GAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEK-----------KAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGE-------EGGDGTPALKKA--KETVAVSATRHDSQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGLDAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCL 1572
P + +E+KTPVT+VTGFLGAGKTTLVNYILKEQREMKIAVIENEYGA+SIDT LVEENVREAEDIVTMDNGCVCCTVRGDLVKAL+NFLDRRDTFD IL+ETTGIADPSPI+ATF+QD+DV+ANYRVDSVLCLVDAKNI +QL R E GAVNEAVQQLAFAD+V++NKTDLV+EEELK V +KI SVNAFA++VQ++KSRVPL S+LNL+S+NLERTL LL+QEAKE E R+K EE+ K G A G D HD XXXXXXXXXXXXXXXXXXXXX K E+GEKRKRD E G DG+ KKA KE V VS+TRHDS+VGS+ +TL G+LDVD FN+FM FL+ENS+NLFRSKGVL+F + K+VFQGVHEQI+CEP+ + W E G +RESKIVFIGL LD D IT +K+C+
Sbjct: 57 PQELPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTDLVEENVREAEDIVTMDNGCVCCTVRGDLVKALVNFLDRRDTFDCILLETTGIADPSPIVATFNQDMDVKANYRVDSVLCLVDAKNILRQLSRTSQEPGAVNEAVQQLAFADSVIINKTDLVSEEELKTVKQKITSVNAFAKVVQAEKSRVPLKSVLNLRSYNLERTLELLEQEAKEEEARKKAAEEKDTKEAKQNADKVKGGHAHGCKDGSCGHDXXXXXXXXXXXXXXXXXXXXXXXDYGK-------ENGEKRKRDDEGGENGVANGADGSKNAKKARKKELVTVSSTRHDSKVGSMGLTLSGNLDVDMFNKFMGEFLRENSANLFRSKGVLAFKDQERKYVFQGVHEQIDCEPAINGWAE-GEERESKIVFIGLDLDNDYITESLKACI 494
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: D8LLE3_ECTSI (cobW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE3_ECTSI) HSP 1 Score: 376 bits (966), Expect = 3.210e-118 Identity = 193/236 (81.78%), Postives = 218/236 (92.37%), Query Frame = 1
Query: 298 PPRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTE-GAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQK 1002
P + +E+KTPVT+VTGFLGAGKTTLVNYILKEQREMKIAVIENEYGA+SIDT LVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFD IL+ETTGIADPSPI+ATF+QD+DV+ANYRVDSVLCLVDAKNI +QL R E GAVNEAVQQLAFAD+V++NKTDLV+EEELK V +KI SVNAFA++VQ++KSRVPL S+LNL+S+NLERTL LL+QEAKE E R+K
Sbjct: 59 PQDLPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTELVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFNQDMDVKANYRVDSVLCLVDAKNILRQLSRTSQEPGAVNEAVQQLAFADSVIINKTDLVSEEELKTVKQKITSVNAFAKVVQAEKSRVPLKSVLNLRSYNLERTLELLEQEAKEEETRKK 294
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A836CCU3_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU3_9STRA) HSP 1 Score: 338 bits (866), Expect = 5.250e-102 Identity = 228/452 (50.44%), Postives = 282/452 (62.39%), Query Frame = 1
Query: 307 VHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTE---GAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTP---ALKKAKETVAVSATRHDSQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGLDAKFVFQGVHEQINCEPSNSNWKED-----------------------GSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
+ DE KTPV I+ G+LGAGKTTLVNYILKEQR++KI VIENE+GA+SID LV ENVRE+EDIV MDNGCVCCTVRGDLVK LL F ++ FD IL+ETTG+ADPSPI++TF+ D D+ YRVDS++C+VDAK+I +QLQR P G VNEA QQLAFAD +++NKTDLV++EEL+ + I VNAFA I+++QKSR P+ +L L SFNLERTL LL+ E XXXXXXXXXXXXXXXXXXXXX A K+A +V ATRH+++VGS+ +TL GSLDV FN FMA ++ +++++R KGVLSF G K+VFQGVHEQI CEP+ W + G R SKIVFIG LDK+ I ++ LA
Sbjct: 53 IPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALA 504
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A7S2GHV4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHV4_9STRA) HSP 1 Score: 325 bits (834), Expect = 1.660e-98 Identity = 213/439 (48.52%), Postives = 292/439 (66.51%), Query Frame = 1
Query: 265 VFRSESESDGPPPRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTPALKKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGL-DAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
+ +++E + V D +KTPVTIVTGFLG+GKTTLVNYILK Q E +I VIENE+G ++ID LV EN+ EDIV+MDNGC+CC+VRGDLV+ L + RR F IL+ETTG+ADP+PI+ TF+ D ++ NYR+DS++ LVD K++++ L + + AVNEAVQQ+AFAD +++NK DLV+ EL+ V ++I S+N A +V++Q+S V L ILN +FNLE TL L + ++ EEE++A + A C +DH XXXXXXXXXXXXXXXXXXXX GE+ E E+ + + K+ +HD SQV S+ + GS+ VD+FN FM+ LQ +++L+RSKGVLSF G + KFVFQGVHE IN PS+ W +D +R S +VFIG L+K+ + AG+K+CLA
Sbjct: 7 IMAAQAEMEDDLIEVPDSEKTPVTIVTGFLGSGKTTLVNYILKSQNEWRICVIENEFGEVNIDEGLVSENIAAKEDIVSMDNGCICCSVRGDLVRTLNTLISRRRDFQAILLETTGLADPAPIITTFNSDATIQDNYRIDSIVTLVDCKHVQQHLHEVKPDDAVNEAVQQVAFADRIMLNKIDLVSPTELQEVKDEILSINHTATLVETQRSVVDLGQILNQNAFNLEHTLEL------DPDILIDDSEEEEEAECND--AACTEDHSXXXXXXXXXXXXXXXXXXXXX--GENADKETPPAENXXXXXXXXXXXXXXQHSTE-PKKXXXXXXXKHDLSQVSSVGMKFPGSMQVDKFNMFMSTLLQAKAADLYRSKGVLSFKGQGNTKFVFQGVHENINFGPSSKPWGDD-EERVSTMVFIGRNLNKEELKAGLKACLA 433
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A1Y5HX51_OSTTA (PRLI-interacting factor L-like protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A1Y5HX51_OSTTA) HSP 1 Score: 312 bits (800), Expect = 3.020e-94 Identity = 183/429 (42.66%), Postives = 251/429 (58.51%), Query Frame = 1
Query: 298 PPRVHDE-DKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTPALKKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGL-DAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
P + DE KTPVTIVTGFLGAGKTTLVN+IL+ +KIAVIENE+GA+SID ALV EN++E ED+++MDNGCVCCTVRGDLV+ALL DR FD ++IETTG+ADP+P+ TF + ++ +YR+DS+LCL DAK++ ++ +GAVNEAVQQ+AFAD +++NK DLV+EEEL+ + + ++SVNA A ++++Q S V L+ +L + SF+LE+TL E ++E K+ +HD + V S+ + ++G LD N FM LQEN+ N++RSKGVL F G DAKFVFQGVHEQIN P+ S W E+ R +++VFIG LD+ + AG ++CLA
Sbjct: 46 PCEMSDETQKTPVTIVTGFLGAGKTTLVNHILRGDHGLKIAVIENEFGAVSIDDALVSENIKEKEDVISMDNGCVCCTVRGDLVRALLTLRDRGKKFDAVIIETTGLADPAPVAFTFFINPEIAEHYRIDSILCLADAKHVALHMEEEKPDGAVNEAVQQVAFADRILLNKIDLVSEEELETLEKTLRSVNASAEVLRTQNSVVDLNVVLGVNSFSLEKTL----------ETDPSFMDENKE--------------------------------------------------------------------------------NKHDLTGVSSVGIAVEGELDFQAVNEFMMNLLQENALNMYRSKGVLCFEGQGDAKFVFQGVHEQINFGPAASTWAEN-EPRINRMVFIGRNLDRPALEAGFRACLA 383
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A7S0VMP5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VMP5_9CRYP) HSP 1 Score: 316 bits (809), Expect = 9.340e-94 Identity = 205/434 (47.24%), Postives = 273/434 (62.90%), Query Frame = 1
Query: 274 SESESDGPPPRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTPALKKAKETVAVSATRHDSQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGLDAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
++ E DG + D KTPVTIVTGFLG+GKTTLVNYIL E+ KIAVIENE+G ++ID++LV +N++ EDI++MDNGCVCCTVRGDLVKA R++ +D ++IETTG+ADP+P+ TF+ +V +R+DS+LCLVDAK+I+ L + VNEAVQQ+AFAD +++NK DLVNE+E K V +KS+NA A++++ Q+SRV LD +L L +F+LE ++++ + E + + GG H XXXXXXXXXXXXXXXXXXXXX C + CTH KK K + H S V S+ V+ +G LD +FN FM LQ +++L+R KGVL F G D KFVF GVHEQI PS W + G K+VFIG KLD+ +T G+ C A
Sbjct: 138 ADDEDDG---MIPDSQKTPVTIVTGFLGSGKTTLVNYILHERHGKKIAVIENEFGEVNIDSSLVTDNLQAKEDIISMDNGCVCCTVRGDLVKAFQTLGRRKEKYDAVIIETTGMADPAPVAFTFNSRPEVGMQFRIDSILCLVDAKHIKAHLDDVRESDVVNEAVQQVAFADKILLNKIDLVNEDEKKKVKRSLKSINATAKVIECQQSRVNLDELLGLGTFSLENVSHMMEELSDEEDAEE------------HGG------HXXXXXXXXXXXXXXXXXXXXXXX----XCDDTCTH------------------PQKKPKRSA------HLSGVSSVGVSFEGELDEKKFNMFMTNLLQTRANDLYRCKGVLKFKGNDDKFVFHGVHEQIEFGPSEVGWAQ-GEKIMVKMVFIGRKLDRAFLTDGITGCKA 521
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: A0A7S4EX41_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EX41_CHRCT) HSP 1 Score: 315 bits (806), Expect = 2.600e-93 Identity = 214/434 (49.31%), Postives = 272/434 (62.67%), Query Frame = 1
Query: 301 PRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGC---THEHGEKRKRDGEEGGDGTPAL----KKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGL-DAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
P + +E+K P+T+VTGFLGAGKTTLVNYIL EQ + KI VIENE+GA+SID ALV+ENV+ AE+++TMDNGC CCTVRGDLVKA DRR FD +L+ETTG+ADP+P++ T + D + N+R+D VLCLVD K+I L E VNEAVQQ+AF+D +++NKTDLV +EEL V E I S+N+FA +++SQ+SRVP+D ++ L SF+LER EEE K E +C XXXXXXXXXXXXXXXXXXXXX E C EGC +H H KK K+ +HD S VGS+A+ + L FNRFM LQ + +L+RSKGVL F + KFVFQGVHE I + + W E G + SKIVFIG L++D + A +C A
Sbjct: 101 PELPEEEKLPITVVTGFLGAGKTTLVNYILNEQHDKKICVIENEFGAVSIDEALVKENVKAAEELITMDNGCACCTVRGDLVKAFGQLKDRRKNFDLVLLETTGLADPAPVIKTITSDFSLMNNFRIDGVLCLVDCKHILTHLNDKRAEDTVNEAVQQVAFSDRIILNKTDLVTKEELAIVKETINSINSFAELMESQQSRVPMDKLMGLNSFSLER------------------FEEEIKEYDLEEAEECTDAXXXXXXXXXXXXXXXXXXXXXXXXXXE--CAEGCKDASHGHAXXXXXXXXXXXXXXXXXXXXXKKPKKK-----KKHDLSGVGSMALKSEVPLRSADFNRFMTKLLQAKAQDLYRSKGVLCFEQEGNKKFVFQGVHEDIQFTEARTEWAE-GEPKVSKIVFIGRDLNRDELEASFNACKA 508
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: C1MKM0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKM0_MICPC) HSP 1 Score: 309 bits (791), Expect = 7.380e-93 Identity = 192/433 (44.34%), Postives = 262/433 (60.51%), Query Frame = 1
Query: 289 DGPPPRVHDEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHE-HGEKRKRDGEEGGD-GTPALKKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGLDA-KFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCLA 1575
DGP D +K PVTIVTGFLGAGKTTLVN+ILK IAVIENE+GA+SID ALV EN++E E+I+TMDNGCVCCTVRGDLV+ALL DR FD ++IETTG+ADP+P+ TF + ++ YR+DS+LCL DAK+I L +GAVNEAVQQ+AFAD +++NK DLVN+ L V + +KS+NA A ++++ S V LD +L + SF++E+TL + D + + E K E + A AA+G D + CT + HG + +G PA K+ ++ +HD + V S+ + +G LD N FM LQEN+ +++RSKGV+ F A KFVFQGVHEQIN PS+ W +D R +K+VFIG L++ + G ++C+A
Sbjct: 2 DGP----SDAEKLPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVGENIKEKENIITMDNGCVCCTVRGDLVRALLTLKDRAKKFDHVIIETTGLADPAPVAFTFFINPEIAEAYRIDSILCLADAKHIGLHLAEEKPDGAVNEAVQQVAFADRILLNKIDLVNDNLLDDVIDTLKSINAVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEV-DPDFLDDEEGHAKAEAIENA-AADGTDDASKTA-------------------------------ACTDDSHGHSHSQINRQGTTLNEPAKKRPRKK------KHDLTGVSSVGIVAEGELDFAEVNTFMMKVLQENALSIYRSKGVMCFKDQGAVKFVFQGVHEQINFGPSSVMWGQD-EPRVNKMVFIGRNLNRKELEDGFRACIA 390
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: C1E1K2_MICCC (CobW C-terminal domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1K2_MICCC) HSP 1 Score: 307 bits (787), Expect = 2.720e-92 Identity = 203/422 (48.10%), Postives = 271/422 (64.22%), Query Frame = 1
Query: 313 DEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTPALKKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGL-DAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCL 1572
D +K PVTIVTGFLGAGKTTLVN+ILK IAVIENE+GA+SID ALV EN++E E+I+TMDNGCVCCTVRGDLV+ALL D+ FD ++IETTG+ADP+P+ TF + ++ +YR+DS+LCL DAK+I L+ +GAVNEAVQQ+AFAD +++NK DLV++ EL V E+++S+N A ++++ S V LD +L + SF++E+TL + D + E E AA+GG DH XXXXXXXXXXXXXXXXXXXXX PA KK ++ RHD + V S+ + +G LD ++ N FM LQEN+ +++RSKGVL F + KFVFQGVHE IN PS+ W D R +++VFIG L++ + G ++CL
Sbjct: 6 DAEKLPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVGENIKEQENIITMDNGCVCCTVRGDLVRALLTLKDKTKKFDHVIIETTGLADPAPVAFTFFINPEIADHYRIDSILCLADAKHIGLHLEEEKPDGAVNEAVQQVAFADRILLNKIDLVSDTELAAVMEQVRSINGVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEV-DPDFLEDEEGHAAATAAHDGAAADGG-----DHGXXXXXXXXXXXXXXXXXXXXXXX---------------------------EPAAKKPRKK------RHDLTGVSSVGILAEGELDFNQVNTFMMTVLQENAKSIYRSKGVLCFKDQGNTKFVFQGVHEHINFGPSSVEWGAD-EPRVNRMVFIGRNLNRKELEEGFRACL 387
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Match: R1ECP0_EMIHU (CobW C-terminal domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ECP0_EMIHU) HSP 1 Score: 309 bits (791), Expect = 3.060e-92 Identity = 184/422 (43.60%), Postives = 250/422 (59.24%), Query Frame = 1
Query: 313 DEDKTPVTIVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAISIDTALVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDTILIETTGIADPSPILATFSQDLDVEANYRVDSVLCLVDAKNIRKQLQRIPTEGAVNEAVQQLAFADTVVVNKTDLVNEEELKGVTEKIKSVNAFARIVQSQKSRVPLDSILNLKSFNLERTLALLDQEAKEAEVRQKKVEEEKKAGAAEGGADCKQDHDHXXXXXXXXXXXXXXXXXXXXXHGEHKCGEGCTHEHGEKRKRDGEEGGDGTPALKKAKETVAVSATRHD-SQVGSLAVTLQGSLDVDRFNRFMAVFLQENSSNLFRSKGVLSFVGL-DAKFVFQGVHEQINCEPSNSNWKEDGSDRESKIVFIGLKLDKDLITAGVKSCL 1572
D +K VT+VTGFLG+GKTTLVNYIL+EQ +I VIENE+GA ALV+EN+ AE++++MDNGC CCTVRGDLV+AL DR+D+FD +L+ETTG+ADP+PILATF+Q+ + NYR+D VLCL + ++ EG VNEAVQQ+AFAD V++NK DLV++ EL V I+ VNAFA +++ Q+SRVP+D ++++ +F++ER + E+ + +EE+ A E CT E +EG A+E +HD S VGS A+ + +LD FNRFM LQ +L+RSKGVL F G DAK++FQGVHEQI E SN+ W E G R SK+VFIG LD++ I A ++C+
Sbjct: 83 DSEKLAVTVVTGFLGSGKTTLVNYILREQHGKRICVIENEFGA-----ALVKENLSSAEEVISMDNGCACCTVRGDLVRALTQLKDRKDSFDLVLLETTGLADPAPILATFTQNWTISNNYRIDGVLCLTFPRPFLDLSCQVRPEGTVNEAVQQVAFADRVLLNKLDLVDKGELGAVKTLIQEVNAFAELIECQQSRVPVDKLMDMNAFSMERF---------QEEIAEYDLEEDAAA-------------------------------------------EECTDE---------QEG---------AREGQKAKKRKHDISGVGSFALQSEHALDSQLFNRFMVQLLQRKKEDLYRSKGVLCFEGEGDAKYIFQGVHEQIQFEQSNTKWVE-GEPRVSKVVFIGRDLDREEIEAAFRTCI 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2140.5630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2140.5630.1 >prot_H-paniculata_contig2140.5630.1 ID=prot_H-paniculata_contig2140.5630.1|Name=mRNA_H-paniculata_contig2140.5630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=523bp MADEAPDNGLTEASTEKPVAANANSDAPGTSDDPEVDDENAEEGGVAGEEback to top mRNA from alignment at H-paniculata_contig2140:730..13735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2140.5630.1 ID=mRNA_H-paniculata_contig2140.5630.1|Name=mRNA_H-paniculata_contig2140.5630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13006bp|location=Sequence derived from alignment at H-paniculata_contig2140:730..13735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2140:730..13735- >mRNA_H-paniculata_contig2140.5630.1 ID=mRNA_H-paniculata_contig2140.5630.1|Name=mRNA_H-paniculata_contig2140.5630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3138bp|location=Sequence derived from alignment at H-paniculata_contig2140:730..13735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |